RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 MED14O60244 1454 aa12.69□□□□□ -0.38
PPP4R1-210ENST00000578557 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
PPP4R1-210ENST00000578557 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
PPP4R1-210ENST00000578557 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
PPP4R1-210ENST00000578557 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
PPP4R1-210ENST00000578557 UNC13BO14795 1591 aa12.67□□□□□ -0.38
PPP4R1-210ENST00000578557 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
PPP4R1-210ENST00000578557 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
PPP4R1-210ENST00000578557 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
PPP4R1-210ENST00000578557 SLIT1O75093 1534 aa12.65□□□□□ -0.38
PPP4R1-210ENST00000578557 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
PPP4R1-210ENST00000578557 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 TET3O43151 1660 aa12.64□□□□□ -0.39
PPP4R1-210ENST00000578557 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
PPP4R1-210ENST00000578557 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-210ENST00000578557 LTKP29376 864 aa12.63□□□□□ -0.39
PPP4R1-210ENST00000578557 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-210ENST00000578557 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-210ENST00000578557 KDM5AP29375 1690 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-210ENST00000578557 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-210ENST00000578557 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
PPP4R1-210ENST00000578557 KCNA6P17658 529 aa12.6□□□□□ -0.39
PPP4R1-210ENST00000578557 PIK3R4Q99570 1358 aa12.59□□□□□ -0.39
PPP4R1-210ENST00000578557 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-210ENST00000578557 BCANQ96GW7 911 aa12.59□□□□□ -0.39
PPP4R1-210ENST00000578557 RAB3GAP2Q9H2M9 1393 aa12.58□□□□□ -0.4
PPP4R1-210ENST00000578557 TOM1O60784 492 aa12.58□□□□□ -0.4
PPP4R1-210ENST00000578557 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-210ENST00000578557 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
PPP4R1-210ENST00000578557 CPS1P31327 1500 aa12.57□□□□□ -0.4
PPP4R1-210ENST00000578557 CCDC144AA2RUR9 1427 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 ADGRB3O60242 1522 aa12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
PPP4R1-210ENST00000578557 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
PPP4R1-210ENST00000578557 CEP152O94986 1710 aa12.55□□□□□ -0.4
PPP4R1-210ENST00000578557 SYNMO15061 1565 aa12.55□□□□□ -0.4
PPP4R1-210ENST00000578557 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
PPP4R1-210ENST00000578557 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
PPP4R1-210ENST00000578557 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
PPP4R1-210ENST00000578557 TRPM2O94759 1503 aa12.53□□□□□ -0.4
PPP4R1-210ENST00000578557 SLC26A8Q96RN1 970 aa12.51□□□□□ -0.41
PPP4R1-210ENST00000578557 PIK3C2BO00750 1634 aa12.51□□□□□ -0.41
PPP4R1-210ENST00000578557 UBR1Q8IWV7 1749 aa12.51□□□□□ -0.41
PPP4R1-210ENST00000578557 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-210ENST00000578557 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-210ENST00000578557 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
PPP4R1-210ENST00000578557 LTBP4Q8N2S1 1624 aa12.5□□□□□ -0.41
PPP4R1-210ENST00000578557 E9PCH4 1651 aa12.5□□□□□ -0.41
PPP4R1-210ENST00000578557 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
PPP4R1-210ENST00000578557 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-210ENST00000578557 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
PPP4R1-210ENST00000578557 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
PPP4R1-210ENST00000578557 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
PPP4R1-210ENST00000578557 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.41
PPP4R1-210ENST00000578557 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
PPP4R1-210ENST00000578557 IQGAP1P46940 1657 aa12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 DIP2AQ14689 1571 aa12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-210ENST00000578557 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
PPP4R1-210ENST00000578557 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
PPP4R1-210ENST00000578557 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
PPP4R1-210ENST00000578557 MSH6P52701 1360 aa12.43□□□□□ -0.42
PPP4R1-210ENST00000578557 POLR1AO95602 1720 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-210ENST00000578557 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-210ENST00000578557 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-210ENST00000578557 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
PPP4R1-210ENST00000578557 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
PPP4R1-210ENST00000578557 ATF3P18847 181 aa12.41□□□□□ -0.42
PPP4R1-210ENST00000578557 FKBP8Q14318 412 aa12.41□□□□□ -0.42
PPP4R1-210ENST00000578557 SPHKAPQ2M3C7 1700 aa12.41□□□□□ -0.42
PPP4R1-210ENST00000578557 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
PPP4R1-210ENST00000578557 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
PPP4R1-210ENST00000578557 SLAIN2Q9P270 581 aa12.39□□□□□ -0.43
PPP4R1-210ENST00000578557 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-210ENST00000578557 ABCC11Q96J66 1382 aa12.39□□□□□ -0.43
PPP4R1-210ENST00000578557 FAM135BQ49AJ0 1406 aa12.38□□□□□ -0.43
PPP4R1-210ENST00000578557 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
PPP4R1-210ENST00000578557 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
PPP4R1-210ENST00000578557 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
PPP4R1-210ENST00000578557 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
PPP4R1-210ENST00000578557 DCCP43146 1447 aa12.37□□□□□ -0.43
PPP4R1-210ENST00000578557 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
PPP4R1-210ENST00000578557 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
PPP4R1-210ENST00000578557 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
PPP4R1-210ENST00000578557 METP08581 1390 aa12.36□□□□□ -0.43
PPP4R1-210ENST00000578557 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-210ENST00000578557 MYOM2P54296 1465 aa12.35□□□□□ -0.43
PPP4R1-210ENST00000578557 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
PPP4R1-210ENST00000578557 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms