RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 AFF2P51816 1311 aa14.93□□□□□ -0.02
CRLF3-202ENST00000577725 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
CRLF3-202ENST00000577725 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
CRLF3-202ENST00000577725 ADGRL2O95490 1459 aa14.93□□□□□ -0.02
CRLF3-202ENST00000577725 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
CRLF3-202ENST00000577725 ARHGAP23Q9P227 1491 aa14.92□□□□□ -0.02
CRLF3-202ENST00000577725 PRDM15P57071 1507 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-202ENST00000577725 RTEL1-TNFRSF6BF6WH68 1400 aa14.92□□□□□ -0.02
CRLF3-202ENST00000577725 TSPY4P0CV99 314 aa14.91□□□□□ -0.02
CRLF3-202ENST00000577725 TSPY10P0CW01 314 aa14.91□□□□□ -0.02
CRLF3-202ENST00000577725 SLIT1O75093 1534 aa14.91□□□□□ -0.02
CRLF3-202ENST00000577725 ANKRD30AQ9BXX3 1397 aa14.9□□□□□ -0.02
CRLF3-202ENST00000577725 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
CRLF3-202ENST00000577725 QTRT2Q9H974 415 aaKnown RBP14.89□□□□□ -0.03
CRLF3-202ENST00000577725 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
CRLF3-202ENST00000577725 ABCC3O15438 1527 aa14.88□□□□□ -0.03
CRLF3-202ENST00000577725 SHPRHQ149N8 1683 aa14.88□□□□□ -0.03
CRLF3-202ENST00000577725 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
CRLF3-202ENST00000577725 UBR1Q8IWV7 1749 aa14.88□□□□□ -0.03
CRLF3-202ENST00000577725 NKTRP30414 1462 aaKnown RBP14.88□□□□□ -0.03
CRLF3-202ENST00000577725 ERVK-7P63135 1459 aa14.88□□□□□ -0.03
CRLF3-202ENST00000577725 HRCP23327 699 aa14.87□□□□□ -0.03
CRLF3-202ENST00000577725 KIF15Q9NS87 1388 aa14.86□□□□□ -0.03
CRLF3-202ENST00000577725 CCDC125Q86Z20 511 aa14.86□□□□□ -0.03
CRLF3-202ENST00000577725 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
CRLF3-202ENST00000577725 IFFO2Q5TF58 517 aa14.84□□□□□ -0.03
CRLF3-202ENST00000577725 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
CRLF3-202ENST00000577725 LRP5O75197 1615 aa14.82□□□□□ -0.04
CRLF3-202ENST00000577725 C8orf37Q96NL8 207 aa14.82□□□□□ -0.04
CRLF3-202ENST00000577725 ANKRD50Q9ULJ7 1429 aa14.82□□□□□ -0.04
CRLF3-202ENST00000577725 SLC26A8Q96RN1 970 aa14.81□□□□□ -0.04
CRLF3-202ENST00000577725 TMEM2Q9UHN6 1383 aa14.81□□□□□ -0.04
CRLF3-202ENST00000577725 NWD1Q149M9 1564 aa14.81□□□□□ -0.04
CRLF3-202ENST00000577725 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
CRLF3-202ENST00000577725 DUOX2Q9NRD8 1548 aa14.78□□□□□ -0.04
CRLF3-202ENST00000577725 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
CRLF3-202ENST00000577725 TET3O43151 1660 aa14.77□□□□□ -0.05
CRLF3-202ENST00000577725 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
CRLF3-202ENST00000577725 EP400Q96L91 3159 aa14.75□□□□□ -0.05
CRLF3-202ENST00000577725 NCOA3Q9Y6Q9 1424 aa14.75□□□□□ -0.05
CRLF3-202ENST00000577725 YY1P25490 414 aa14.74□□□□□ -0.05
CRLF3-202ENST00000577725 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
CRLF3-202ENST00000577725 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
CRLF3-202ENST00000577725 ATF3P18847 181 aa14.72□□□□□ -0.05
CRLF3-202ENST00000577725 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
CRLF3-202ENST00000577725 C14orf37Q86TY3 774 aa14.72□□□□□ -0.05
CRLF3-202ENST00000577725 MPHOSPH9Q99550 1183 aa14.72□□□□□ -0.05
CRLF3-202ENST00000577725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
CRLF3-202ENST00000577725 UNC13BO14795 1591 aa14.72□□□□□ -0.05
CRLF3-202ENST00000577725 NUP155O75694 1391 aa14.72□□□□□ -0.05
CRLF3-202ENST00000577725 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
CRLF3-202ENST00000577725 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.05
CRLF3-202ENST00000577725 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
CRLF3-202ENST00000577725 ADRA2BP18089 450 aa14.69□□□□□ -0.06
CRLF3-202ENST00000577725 BCANQ96GW7 911 aa14.69□□□□□ -0.06
CRLF3-202ENST00000577725 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
CRLF3-202ENST00000577725 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
CRLF3-202ENST00000577725 EFCAB6Q5THR3 1501 aa14.69□□□□□ -0.06
CRLF3-202ENST00000577725 NHSL1Q5SYE7 1610 aa14.69□□□□□ -0.06
CRLF3-202ENST00000577725 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
CRLF3-202ENST00000577725 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
CRLF3-202ENST00000577725 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
CRLF3-202ENST00000577725 USP21Q9UK80 565 aa14.68□□□□□ -0.06
CRLF3-202ENST00000577725 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
CRLF3-202ENST00000577725 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
CRLF3-202ENST00000577725 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
CRLF3-202ENST00000577725 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CRLF3-202ENST00000577725 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
CRLF3-202ENST00000577725 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
CRLF3-202ENST00000577725 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
CRLF3-202ENST00000577725 IQGAP3Q86VI3 1631 aa14.65□□□□□ -0.06
CRLF3-202ENST00000577725 DEFB132Q7Z7B7 95 aa14.64□□□□□ -0.07
CRLF3-202ENST00000577725 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
CRLF3-202ENST00000577725 ASXL1Q8IXJ9 1541 aa14.63□□□□□ -0.07
CRLF3-202ENST00000577725 ATRNO75882 1429 aa14.63□□□□□ -0.07
CRLF3-202ENST00000577725 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.63□□□□□ -0.07
CRLF3-202ENST00000577725 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
CRLF3-202ENST00000577725 SF3B2Q13435 895 aaKnown RBP14.62□□□□□ -0.07
CRLF3-202ENST00000577725 FNBP4Q8N3X1 1017 aaPredicted RBP14.62□□□□□ -0.07
CRLF3-202ENST00000577725 IDI1Q13907 227 aa14.61□□□□□ -0.07
CRLF3-202ENST00000577725 CEP152O94986 1710 aa14.61□□□□□ -0.07
CRLF3-202ENST00000577725 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
CRLF3-202ENST00000577725 BCL9LQ86UU0 1499 aa14.59□□□□□ -0.07
CRLF3-202ENST00000577725 CHD2O14647 1828 aaKnown RBP14.59□□□□□ -0.07
CRLF3-202ENST00000577725 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
CRLF3-202ENST00000577725 KANK1Q14678 1352 aa14.58□□□□□ -0.08
CRLF3-202ENST00000577725 DCCP43146 1447 aa14.58□□□□□ -0.08
CRLF3-202ENST00000577725 TBX22Q9Y458 520 aa14.57□□□□□ -0.08
CRLF3-202ENST00000577725 E9PCH4 1651 aa14.56□□□□□ -0.08
CRLF3-202ENST00000577725 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
CRLF3-202ENST00000577725 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
CRLF3-202ENST00000577725 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
CRLF3-202ENST00000577725 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
CRLF3-202ENST00000577725 PPP1R15AO75807 674 aaPredicted RBP14.54□□□□□ -0.08
CRLF3-202ENST00000577725 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
CRLF3-202ENST00000577725 MST1RQ04912 1400 aa14.53□□□□□ -0.08
CRLF3-202ENST00000577725 DDX17Q92841 729 aaKnown RBP14.53□□□□□ -0.08
CRLF3-202ENST00000577725 PIK3R4Q99570 1358 aa14.52□□□□□ -0.08
CRLF3-202ENST00000577725 HDGFP51858 240 aaKnown RBP14.52□□□□□ -0.09
CRLF3-202ENST00000577725 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms