RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
ERCC4-204ENST00000573018 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.85
ERCC4-204ENST00000573018 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
ERCC4-204ENST00000573018 RTN4Q9NQC3 1192 aaKnown RBP9.77□□□□□ -0.85
ERCC4-204ENST00000573018 PTGDRQ13258 359 aa9.76□□□□□ -0.85
ERCC4-204ENST00000573018 TRIM67Q6ZTA4 783 aa9.76□□□□□ -0.85
ERCC4-204ENST00000573018 PPEF1O14829 653 aaPredicted RBP9.75□□□□□ -0.85
ERCC4-204ENST00000573018 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
ERCC4-204ENST00000573018 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
ERCC4-204ENST00000573018 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
ERCC4-204ENST00000573018 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
ERCC4-204ENST00000573018 ADGRG1Q9Y653 693 aa9.74□□□□□ -0.85
ERCC4-204ENST00000573018 S1PR4O95977 384 aa9.73□□□□□ -0.85
ERCC4-204ENST00000573018 CFHP08603 1231 aa9.73□□□□□ -0.85
ERCC4-204ENST00000573018 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
ERCC4-204ENST00000573018 RCCD1A6NED2 376 aa9.72□□□□□ -0.85
ERCC4-204ENST00000573018 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
ERCC4-204ENST00000573018 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
ERCC4-204ENST00000573018 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
ERCC4-204ENST00000573018 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
ERCC4-204ENST00000573018 PKDCCQ504Y2 493 aa9.7□□□□□ -0.86
ERCC4-204ENST00000573018 ZNF775Q96BV0 537 aaPredicted RBP9.7□□□□□ -0.86
ERCC4-204ENST00000573018 LIAT1Q6ZQX7 453 aa9.69□□□□□ -0.86
ERCC4-204ENST00000573018 ANKLE1Q8NAG6 615 aa9.69□□□□□ -0.86
ERCC4-204ENST00000573018 SLC10A3P09131 477 aa9.68□□□□□ -0.86
ERCC4-204ENST00000573018 MYT1Q01538 1121 aa9.68□□□□□ -0.86
ERCC4-204ENST00000573018 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
ERCC4-204ENST00000573018 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
ERCC4-204ENST00000573018 TNFRSF10AO00220 468 aa9.67□□□□□ -0.86
ERCC4-204ENST00000573018 ADH1BP00325 375 aa9.66□□□□□ -0.86
ERCC4-204ENST00000573018 DGAT1O75907 488 aa9.65□□□□□ -0.86
ERCC4-204ENST00000573018 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 POTECB2RU33 542 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PRR20EP86478 221 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PRR20CP86479 221 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PRR20DP86480 221 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PRR20BP86481 221 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PRR20AP86496 221 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
ERCC4-204ENST00000573018 NR1I2O75469 434 aa9.63□□□□□ -0.87
ERCC4-204ENST00000573018 FCHSD2O94868 740 aa9.63□□□□□ -0.87
ERCC4-204ENST00000573018 PUS10Q3MIT2 529 aaKnown RBP9.63□□□□□ -0.87
ERCC4-204ENST00000573018 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
ERCC4-204ENST00000573018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.62□□□□□ -0.87
ERCC4-204ENST00000573018 GDF9O60383 454 aa9.61□□□□□ -0.87
ERCC4-204ENST00000573018 SEMA3EO15041 775 aa9.6□□□□□ -0.87
ERCC4-204ENST00000573018 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
ERCC4-204ENST00000573018 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
ERCC4-204ENST00000573018 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
ERCC4-204ENST00000573018 FOXC1Q12948 553 aa9.58□□□□□ -0.88
ERCC4-204ENST00000573018 SPSB2Q99619 263 aa9.57□□□□□ -0.88
ERCC4-204ENST00000573018 OATP04181 439 aa9.56□□□□□ -0.88
ERCC4-204ENST00000573018 METTL3Q86U44 580 aaKnown RBP9.55□□□□□ -0.88
ERCC4-204ENST00000573018 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
ERCC4-204ENST00000573018 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
ERCC4-204ENST00000573018 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
ERCC4-204ENST00000573018 RBM26Q5T8P6 1007 aaKnown RBP9.53□□□□□ -0.88
ERCC4-204ENST00000573018 P3H3Q8IVL6 736 aa9.53□□□□□ -0.88
ERCC4-204ENST00000573018 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
ERCC4-204ENST00000573018 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
ERCC4-204ENST00000573018 FECHP22830 423 aa9.52□□□□□ -0.89
ERCC4-204ENST00000573018 HIC1Q14526 733 aa9.52□□□□□ -0.89
ERCC4-204ENST00000573018 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
ERCC4-204ENST00000573018 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
ERCC4-204ENST00000573018 FUT2Q10981 343 aa9.5□□□□□ -0.89
ERCC4-204ENST00000573018 MORN1Q5T089 497 aa9.49□□□□□ -0.89
ERCC4-204ENST00000573018 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
ERCC4-204ENST00000573018 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-204ENST00000573018 DACH1Q9UI36 760 aa9.48□□□□□ -0.89
ERCC4-204ENST00000573018 GNPATO15228 680 aa9.47□□□□□ -0.89
ERCC4-204ENST00000573018 RPIAP49247 311 aa9.47□□□□□ -0.89
ERCC4-204ENST00000573018 FAM160A2Q8N612 972 aaPredicted RBP9.47□□□□□ -0.89
ERCC4-204ENST00000573018 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
ERCC4-204ENST00000573018 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
ERCC4-204ENST00000573018 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
ERCC4-204ENST00000573018 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
ERCC4-204ENST00000573018 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
ERCC4-204ENST00000573018 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
ERCC4-204ENST00000573018 TOR4AQ9NXH8 423 aa9.45□□□□□ -0.9
ERCC4-204ENST00000573018 TESPA1A2RU30 521 aaPredicted RBP9.44□□□□□ -0.9
ERCC4-204ENST00000573018 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
ERCC4-204ENST00000573018 TREML4Q6UXN2 200 aa9.44□□□□□ -0.9
ERCC4-204ENST00000573018 GPR37O15354 613 aa9.43□□□□□ -0.9
ERCC4-204ENST00000573018 AXIN1O15169 862 aa9.42□□□□□ -0.9
ERCC4-204ENST00000573018 GCGRP47871 477 aa9.42□□□□□ -0.9
ERCC4-204ENST00000573018 PHOX2BQ99453 314 aa9.42□□□□□ -0.9
ERCC4-204ENST00000573018 GMPR2Q9P2T1 348 aaKnown RBP9.42□□□□□ -0.9
ERCC4-204ENST00000573018 AVPP01185 164 aa9.41□□□□□ -0.9
ERCC4-204ENST00000573018 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
ERCC4-204ENST00000573018 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
ERCC4-204ENST00000573018 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
ERCC4-204ENST00000573018 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
ERCC4-204ENST00000573018 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
ERCC4-204ENST00000573018 C11orf95C9JLR9 678 aaPredicted RBP9.39□□□□□ -0.91
ERCC4-204ENST00000573018 ZBTB24O43167 697 aaPredicted RBP9.39□□□□□ -0.91
ERCC4-204ENST00000573018 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
ERCC4-204ENST00000573018 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
ERCC4-204ENST00000573018 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
ERCC4-204ENST00000573018 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
ERCC4-204ENST00000573018 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms