RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 EMID1Q96A84 441 aaPredicted RBP7.14□□□□□ -1.27
RPA1-204ENST00000571725 PRR14Q9BWN1 585 aa7.14□□□□□ -1.27
RPA1-204ENST00000571725 PCDHB3Q9Y5E6 796 aa7.14□□□□□ -1.27
RPA1-204ENST00000571725 EN1Q05925 392 aaPredicted RBP7.13□□□□□ -1.27
RPA1-204ENST00000571725 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
RPA1-204ENST00000571725 DACH1Q9UI36 760 aa7.13□□□□□ -1.27
RPA1-204ENST00000571725 PPEF1O14829 653 aaPredicted RBP7.12□□□□□ -1.27
RPA1-204ENST00000571725 CRIPAKQ8N1N5 446 aa7.12□□□□□ -1.27
RPA1-204ENST00000571725 CERKQ8TCT0 537 aa7.11□□□□□ -1.27
RPA1-204ENST00000571725 DPYSL4O14531 572 aa7.1□□□□□ -1.27
RPA1-204ENST00000571725 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
RPA1-204ENST00000571725 S1PR4O95977 384 aa7.1□□□□□ -1.27
RPA1-204ENST00000571725 NUDT18Q6ZVK8 323 aa7.1□□□□□ -1.27
RPA1-204ENST00000571725 NKX1-1Q15270 411 aaPredicted RBP7.09□□□□□ -1.27
RPA1-204ENST00000571725 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
RPA1-204ENST00000571725 SWT1Q5T5J6 900 aaKnown RBP7.09□□□□□ -1.27
RPA1-204ENST00000571725 TLL1O43897 1013 aa7.08□□□□□ -1.28
RPA1-204ENST00000571725 LMOD2Q6P5Q4 547 aa7.08□□□□□ -1.28
RPA1-204ENST00000571725 BLOC1S3Q6QNY0 202 aa7.08□□□□□ -1.28
RPA1-204ENST00000571725 FAM198AQ9UFP1 575 aa7.08□□□□□ -1.28
RPA1-204ENST00000571725 CYP4X1Q8N118 509 aa7.07□□□□□ -1.28
RPA1-204ENST00000571725 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
RPA1-204ENST00000571725 ZSCAN1Q8NBB4 408 aa7.06□□□□□ -1.28
RPA1-204ENST00000571725 SLC16A10Q8TF71 515 aa7.06□□□□□ -1.28
RPA1-204ENST00000571725 AVPP01185 164 aa7.05□□□□□ -1.28
RPA1-204ENST00000571725 SENP2Q9HC62 589 aa7.03□□□□□ -1.28
RPA1-204ENST00000571725 PKD2L1Q9P0L9 805 aa7.03□□□□□ -1.28
RPA1-204ENST00000571725 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
RPA1-204ENST00000571725 SLC6A16Q9GZN6 736 aa7.01□□□□□ -1.29
RPA1-204ENST00000571725 DNAJC5Q9H3Z4 198 aa7.01□□□□□ -1.29
RPA1-204ENST00000571725 TTC24A2A3L6 582 aaPredicted RBP7□□□□□ -1.29
RPA1-204ENST00000571725 ADH1BP00325 375 aa7□□□□□ -1.29
RPA1-204ENST00000571725 DCAF8L2P0C7V8 631 aa7□□□□□ -1.29
RPA1-204ENST00000571725 SMCPP49901 116 aaPredicted RBP7□□□□□ -1.29
RPA1-204ENST00000571725 LCE2CQ5TA81 110 aa7□□□□□ -1.29
RPA1-204ENST00000571725 KMT5BQ4FZB7 885 aa6.99□□□□□ -1.29
RPA1-204ENST00000571725 ATP13A2Q9NQ11 1180 aa6.99□□□□□ -1.29
RPA1-204ENST00000571725 TOR4AQ9NXH8 423 aa6.99□□□□□ -1.29
RPA1-204ENST00000571725 CD2BP2O95400 341 aaKnown RBP6.98□□□□□ -1.29
RPA1-204ENST00000571725 PLA2G2CQ5R387 149 aa6.98□□□□□ -1.29
RPA1-204ENST00000571725 TRIM47Q96LD4 638 aa6.98□□□□□ -1.29
RPA1-204ENST00000571725 RBM27Q9P2N5 1060 aaKnown RBP6.98□□□□□ -1.29
RPA1-204ENST00000571725 CAMK2BQ13554 666 aa6.97□□□□□ -1.29
RPA1-204ENST00000571725 NR1I2O75469 434 aa6.96□□□□□ -1.3
RPA1-204ENST00000571725 GMPRP36959 345 aa6.96□□□□□ -1.3
RPA1-204ENST00000571725 IRF7Q92985 503 aa6.96□□□□□ -1.3
RPA1-204ENST00000571725 KIFC2Q96AC6 838 aa6.96□□□□□ -1.3
RPA1-204ENST00000571725 GRXCR2A6NFK2 248 aa6.95□□□□□ -1.3
RPA1-204ENST00000571725 RPIAP49247 311 aa6.94□□□□□ -1.3
RPA1-204ENST00000571725 SPDYE16A6NNV3 312 aaPredicted RBP6.93□□□□□ -1.3
RPA1-204ENST00000571725 GTPBP6O43824 516 aaPredicted RBP6.93□□□□□ -1.3
RPA1-204ENST00000571725 PDIA6Q15084 440 aa6.93□□□□□ -1.3
RPA1-204ENST00000571725 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
RPA1-204ENST00000571725 ACTN4O43707 911 aaKnown RBP6.92□□□□□ -1.3
RPA1-204ENST00000571725 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
RPA1-204ENST00000571725 PADI6Q6TGC4 694 aa6.91□□□□□ -1.3
RPA1-204ENST00000571725 CDHR5Q9HBB8 845 aa6.91□□□□□ -1.3
RPA1-204ENST00000571725 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
RPA1-204ENST00000571725 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
RPA1-204ENST00000571725 CFHP08603 1231 aa6.89□□□□□ -1.31
RPA1-204ENST00000571725 PLCB2Q00722 1185 aa6.89□□□□□ -1.31
RPA1-204ENST00000571725 SPSB2Q99619 263 aa6.88□□□□□ -1.31
RPA1-204ENST00000571725 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.88□□□□□ -1.31
RPA1-204ENST00000571725 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
RPA1-204ENST00000571725 PRIM1P49642 420 aaKnown RBP6.87□□□□□ -1.31
RPA1-204ENST00000571725 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
RPA1-204ENST00000571725 DNAJB2P25686 324 aa6.86□□□□□ -1.31
RPA1-204ENST00000571725 SNIP1Q8TAD8 396 aaKnown RBP6.86□□□□□ -1.31
RPA1-204ENST00000571725 EYA1Q99502 592 aa6.86□□□□□ -1.31
RPA1-204ENST00000571725 SMPD1P17405 629 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 VEGFBP49765 207 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 SCUBE3Q8IX30 993 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 TMEM151AQ8N4L1 468 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 TTC13Q8NBP0 860 aa6.85□□□□□ -1.31
RPA1-204ENST00000571725 KCNMA1Q12791 1236 aa6.83□□□□□ -1.32
RPA1-204ENST00000571725 BBXQ8WY36 941 aaPredicted RBP6.82□□□□□ -1.32
RPA1-204ENST00000571725 J3QL48 77 aa6.81□□□□□ -1.32
RPA1-204ENST00000571725 GDF11O95390 407 aa6.81□□□□□ -1.32
RPA1-204ENST00000571725 HAP1P54257 671 aaPredicted RBP6.81□□□□□ -1.32
RPA1-204ENST00000571725 RBM46Q8TBY0 533 aaKnown RBP6.81□□□□□ -1.32
RPA1-204ENST00000571725 H3BM21 787 aa6.8□□□□□ -1.32
RPA1-204ENST00000571725 WNT7AO00755 349 aa6.8□□□□□ -1.32
RPA1-204ENST00000571725 OSBPP22059 807 aa6.8□□□□□ -1.32
RPA1-204ENST00000571725 PUS10Q3MIT2 529 aaKnown RBP6.8□□□□□ -1.32
RPA1-204ENST00000571725 HPS1Q92902 700 aa6.8□□□□□ -1.32
RPA1-204ENST00000571725 TMEM134Q9H6X4 195 aa6.8□□□□□ -1.32
RPA1-204ENST00000571725 ERBB4Q15303 1308 aa6.78□□□□□ -1.32
RPA1-204ENST00000571725 MRGPRX2Q96LB1 330 aa6.78□□□□□ -1.32
RPA1-204ENST00000571725 RNF225M0QZC1 329 aaPredicted RBP6.77□□□□□ -1.33
RPA1-204ENST00000571725 RSPH4AQ5TD94 716 aa6.77□□□□□ -1.33
RPA1-204ENST00000571725 NPDC1Q9NQX5 325 aaPredicted RBP6.77□□□□□ -1.33
RPA1-204ENST00000571725 RASSF7Q02833 373 aa6.76□□□□□ -1.33
RPA1-204ENST00000571725 REPIN1Q9BWE0 567 aaKnown RBP6.76□□□□□ -1.33
RPA1-204ENST00000571725 XP32Q5T750 250 aa6.75□□□□□ -1.33
RPA1-204ENST00000571725 VSIG10Q8N0Z9 540 aa6.75□□□□□ -1.33
RPA1-204ENST00000571725 RCCD1A6NED2 376 aa6.74□□□□□ -1.33
RPA1-204ENST00000571725 SLC10A3P09131 477 aa6.74□□□□□ -1.33
RPA1-204ENST00000571725 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
RPA1-204ENST00000571725 BMP1P13497 986 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms