RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 ST20-MTHFSA0A0A6YYL1 179 aa19.22■□□□□ 0.67
ITGA3-216ENST00000570989 ZNF518AQ6AHZ1 1483 aa19.22■□□□□ 0.67
ITGA3-216ENST00000570989 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
ITGA3-216ENST00000570989 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
ITGA3-216ENST00000570989 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
ITGA3-216ENST00000570989 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
ITGA3-216ENST00000570989 PDE3BQ13370 1112 aa19.2■□□□□ 0.66
ITGA3-216ENST00000570989 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
ITGA3-216ENST00000570989 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
ITGA3-216ENST00000570989 POGZQ7Z3K3 1410 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 NLRP13Q86W25 1043 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 NEO1Q92859 1461 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
ITGA3-216ENST00000570989 PRDM15P57071 1507 aaPredicted RBP19.16■□□□□ 0.66
ITGA3-216ENST00000570989 TET3O43151 1660 aa19.16■□□□□ 0.66
ITGA3-216ENST00000570989 FRMPD1Q5SYB0 1578 aa19.16■□□□□ 0.66
ITGA3-216ENST00000570989 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
ITGA3-216ENST00000570989 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
ITGA3-216ENST00000570989 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
ITGA3-216ENST00000570989 A2MP01023 1474 aa19.15■□□□□ 0.66
ITGA3-216ENST00000570989 PLIN1O60240 522 aa19.14■□□□□ 0.66
ITGA3-216ENST00000570989 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
ITGA3-216ENST00000570989 SPHKAPQ2M3C7 1700 aa19.13■□□□□ 0.65
ITGA3-216ENST00000570989 BLMP54132 1417 aaPredicted RBP19.13■□□□□ 0.65
ITGA3-216ENST00000570989 KIF3BO15066 747 aa19.13■□□□□ 0.65
ITGA3-216ENST00000570989 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
ITGA3-216ENST00000570989 PRAG1Q86YV5 1406 aa19.12■□□□□ 0.65
ITGA3-216ENST00000570989 TRPM2O94759 1503 aa19.12■□□□□ 0.65
ITGA3-216ENST00000570989 TRPM1Q7Z4N2 1603 aa19.12■□□□□ 0.65
ITGA3-216ENST00000570989 CRBNQ96SW2 442 aa19.12■□□□□ 0.65
ITGA3-216ENST00000570989 MLH3Q9UHC1 1453 aa19.11■□□□□ 0.65
ITGA3-216ENST00000570989 KANK1Q14678 1352 aa19.11■□□□□ 0.65
ITGA3-216ENST00000570989 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
ITGA3-216ENST00000570989 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
ITGA3-216ENST00000570989 ZMYM4Q5VZL5 1548 aa19.1■□□□□ 0.65
ITGA3-216ENST00000570989 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
ITGA3-216ENST00000570989 INSRP06213 1382 aa19.09■□□□□ 0.65
ITGA3-216ENST00000570989 PTPRTO14522 1441 aa19.09■□□□□ 0.65
ITGA3-216ENST00000570989 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
ITGA3-216ENST00000570989 CEP152O94986 1710 aa19.07■□□□□ 0.64
ITGA3-216ENST00000570989 BRPF3Q9ULD4 1205 aa19.07■□□□□ 0.64
ITGA3-216ENST00000570989 KDM2BQ8NHM5 1336 aa19.07■□□□□ 0.64
ITGA3-216ENST00000570989 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
ITGA3-216ENST00000570989 CLTCL1P53675 1640 aa19.06■□□□□ 0.64
ITGA3-216ENST00000570989 NFKBIBQ15653 356 aa19.06■□□□□ 0.64
ITGA3-216ENST00000570989 GSE1Q14687 1217 aa19.05■□□□□ 0.64
ITGA3-216ENST00000570989 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
ITGA3-216ENST00000570989 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
ITGA3-216ENST00000570989 SLC4A3P48751 1232 aa19.02■□□□□ 0.64
ITGA3-216ENST00000570989 LAMC1P11047 1609 aa19.02■□□□□ 0.64
ITGA3-216ENST00000570989 GPRASP1Q5JY77 1395 aa19.02■□□□□ 0.64
ITGA3-216ENST00000570989 LMTK2Q8IWU2 1503 aa19.02■□□□□ 0.64
ITGA3-216ENST00000570989 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.01■□□□□ 0.63
ITGA3-216ENST00000570989 SIGLEC1Q9BZZ2 1709 aa19■□□□□ 0.63
ITGA3-216ENST00000570989 DISP3Q9P2K9 1392 aa19■□□□□ 0.63
ITGA3-216ENST00000570989 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
ITGA3-216ENST00000570989 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
ITGA3-216ENST00000570989 DIP2CQ9Y2E4 1556 aa18.99■□□□□ 0.63
ITGA3-216ENST00000570989 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
ITGA3-216ENST00000570989 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
ITGA3-216ENST00000570989 YEATS2Q9ULM3 1422 aa18.98■□□□□ 0.63
ITGA3-216ENST00000570989 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
ITGA3-216ENST00000570989 TESK2Q96S53 571 aa18.97■□□□□ 0.63
ITGA3-216ENST00000570989 NEURL4Q96JN8 1562 aa18.97■□□□□ 0.63
ITGA3-216ENST00000570989 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
ITGA3-216ENST00000570989 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
ITGA3-216ENST00000570989 ARHGEF40Q8TER5 1519 aa18.94■□□□□ 0.62
ITGA3-216ENST00000570989 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
ITGA3-216ENST00000570989 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
ITGA3-216ENST00000570989 PANK3Q9H999 370 aa18.93■□□□□ 0.62
ITGA3-216ENST00000570989 KIF1BO60333 1816 aa18.93■□□□□ 0.62
ITGA3-216ENST00000570989 GGT6Q6P531 493 aa18.92■□□□□ 0.62
ITGA3-216ENST00000570989 NPATQ14207 1427 aa18.92■□□□□ 0.62
ITGA3-216ENST00000570989 ABCC3O15438 1527 aa18.92■□□□□ 0.62
ITGA3-216ENST00000570989 DUSP27Q5VZP5 1158 aa18.92■□□□□ 0.62
ITGA3-216ENST00000570989 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
ITGA3-216ENST00000570989 STAC3Q96MF2 364 aa18.9■□□□□ 0.62
ITGA3-216ENST00000570989 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
ITGA3-216ENST00000570989 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
ITGA3-216ENST00000570989 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
ITGA3-216ENST00000570989 FRAT2O75474 233 aaPredicted RBP18.88■□□□□ 0.61
ITGA3-216ENST00000570989 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
ITGA3-216ENST00000570989 IFT172Q9UG01 1749 aa18.87■□□□□ 0.61
ITGA3-216ENST00000570989 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
ITGA3-216ENST00000570989 MYOM2P54296 1465 aa18.86■□□□□ 0.61
ITGA3-216ENST00000570989 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
ITGA3-216ENST00000570989 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
ITGA3-216ENST00000570989 KIAA1210Q9ULL0 1709 aa18.85■□□□□ 0.61
ITGA3-216ENST00000570989 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
ITGA3-216ENST00000570989 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
ITGA3-216ENST00000570989 PPP2R1AP30153 589 aa18.81■□□□□ 0.6
ITGA3-216ENST00000570989 RGS3P49796 1198 aa18.81■□□□□ 0.6
ITGA3-216ENST00000570989 TMF1P82094 1093 aa18.81■□□□□ 0.6
ITGA3-216ENST00000570989 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
ITGA3-216ENST00000570989 USP19O94966 1318 aa18.8■□□□□ 0.6
ITGA3-216ENST00000570989 NOS1P29475 1434 aa18.8■□□□□ 0.6
ITGA3-216ENST00000570989 GOLGA2Q08379 1002 aa18.8■□□□□ 0.6
ITGA3-216ENST00000570989 EIF3AQ14152 1382 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms