RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SLFN5Q08AF3 891 aa19.71■□□□□ 0.75
USP43-202ENST00000570475 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
USP43-202ENST00000570475 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
USP43-202ENST00000570475 SLC12A5Q9H2X9 1139 aa19.7■□□□□ 0.74
USP43-202ENST00000570475 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
USP43-202ENST00000570475 ITSN2Q9NZM3 1697 aa19.69■□□□□ 0.74
USP43-202ENST00000570475 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
USP43-202ENST00000570475 E9PSI1 815 aa19.69■□□□□ 0.74
USP43-202ENST00000570475 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
USP43-202ENST00000570475 A2MP01023 1474 aa19.68■□□□□ 0.74
USP43-202ENST00000570475 IGHDP01880 384 aa19.68■□□□□ 0.74
USP43-202ENST00000570475 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
USP43-202ENST00000570475 BECN1Q14457 450 aa19.66■□□□□ 0.74
USP43-202ENST00000570475 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
USP43-202ENST00000570475 CFAP53Q96M91 514 aa19.65■□□□□ 0.74
USP43-202ENST00000570475 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
USP43-202ENST00000570475 KANK1Q14678 1352 aa19.65■□□□□ 0.74
USP43-202ENST00000570475 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
USP43-202ENST00000570475 ARHGEF12Q9NZN5 1544 aa19.63■□□□□ 0.73
USP43-202ENST00000570475 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
USP43-202ENST00000570475 C8orf34Q49A92 452 aa19.63■□□□□ 0.73
USP43-202ENST00000570475 MTHFSP49914 203 aa19.62■□□□□ 0.73
USP43-202ENST00000570475 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
USP43-202ENST00000570475 SRPK2P78362 688 aaKnown RBP19.61■□□□□ 0.73
USP43-202ENST00000570475 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
USP43-202ENST00000570475 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
USP43-202ENST00000570475 SEC24BO95487 1268 aa19.6■□□□□ 0.73
USP43-202ENST00000570475 COL17A1Q9UMD9 1497 aaPredicted RBP19.59■□□□□ 0.73
USP43-202ENST00000570475 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
USP43-202ENST00000570475 PLA2R1Q13018 1463 aa19.59■□□□□ 0.73
USP43-202ENST00000570475 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
USP43-202ENST00000570475 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
USP43-202ENST00000570475 CARD14Q9BXL6 1004 aa19.59■□□□□ 0.73
USP43-202ENST00000570475 TSR2Q969E8 191 aaKnown RBP19.58■□□□□ 0.73
USP43-202ENST00000570475 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
USP43-202ENST00000570475 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
USP43-202ENST00000570475 HSP90AA1P07900 732 aaKnown RBP19.57■□□□□ 0.72
USP43-202ENST00000570475 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
USP43-202ENST00000570475 MAGI2Q86UL8 1455 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 KDM2BQ8NHM5 1336 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 CABP2Q9NPB3 220 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 SCAPERQ9BY12 1400 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
USP43-202ENST00000570475 SHANK2Q9UPX8 1470 aa19.54■□□□□ 0.72
USP43-202ENST00000570475 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
USP43-202ENST00000570475 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
USP43-202ENST00000570475 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
USP43-202ENST00000570475 TRAPPC8Q9Y2L5 1435 aa19.53■□□□□ 0.72
USP43-202ENST00000570475 RWDD1Q9H446 243 aaPredicted RBP19.52■□□□□ 0.72
USP43-202ENST00000570475 NUP160Q12769 1436 aa19.52■□□□□ 0.72
USP43-202ENST00000570475 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
USP43-202ENST00000570475 FOXD4L1Q9NU39 408 aa19.52■□□□□ 0.72
USP43-202ENST00000570475 POGKQ9P215 609 aa19.52■□□□□ 0.72
USP43-202ENST00000570475 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
USP43-202ENST00000570475 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
USP43-202ENST00000570475 RLBP1P12271 317 aa19.5■□□□□ 0.71
USP43-202ENST00000570475 CDC42BPAQ5VT25 1732 aa19.5■□□□□ 0.71
USP43-202ENST00000570475 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
USP43-202ENST00000570475 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
USP43-202ENST00000570475 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
USP43-202ENST00000570475 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
USP43-202ENST00000570475 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
USP43-202ENST00000570475 RARSP54136 660 aaKnown RBP19.47■□□□□ 0.71
USP43-202ENST00000570475 MINK1Q8N4C8 1332 aaPredicted RBP19.47■□□□□ 0.71
USP43-202ENST00000570475 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
USP43-202ENST00000570475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP43-202ENST00000570475 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
USP43-202ENST00000570475 ZMYM4Q5VZL5 1548 aa19.45■□□□□ 0.7
USP43-202ENST00000570475 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
USP43-202ENST00000570475 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
USP43-202ENST00000570475 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
USP43-202ENST00000570475 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
USP43-202ENST00000570475 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
USP43-202ENST00000570475 DZIP1LQ8IYY4 767 aaKnown RBP19.44■□□□□ 0.7
USP43-202ENST00000570475 APBB1O00213 710 aa19.43■□□□□ 0.7
USP43-202ENST00000570475 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
USP43-202ENST00000570475 ABCA8O94911 1581 aa19.43■□□□□ 0.7
USP43-202ENST00000570475 FBLN1P23142 703 aa19.43■□□□□ 0.7
USP43-202ENST00000570475 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
USP43-202ENST00000570475 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
USP43-202ENST00000570475 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
USP43-202ENST00000570475 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
USP43-202ENST00000570475 ASXL1Q8IXJ9 1541 aa19.4■□□□□ 0.7
USP43-202ENST00000570475 SOX12O15370 315 aa19.4■□□□□ 0.7
USP43-202ENST00000570475 RIPK4P57078 832 aa19.39■□□□□ 0.7
USP43-202ENST00000570475 CROCC2H7BZ55 1655 aa19.39■□□□□ 0.69
USP43-202ENST00000570475 HSCBQ8IWL3 235 aa19.38■□□□□ 0.69
USP43-202ENST00000570475 C1orf115Q9H7X2 142 aa19.38■□□□□ 0.69
USP43-202ENST00000570475 HMOX1P09601 288 aa19.37■□□□□ 0.69
USP43-202ENST00000570475 TRPM1Q7Z4N2 1603 aa19.37■□□□□ 0.69
USP43-202ENST00000570475 HSP90AB1P08238 724 aaKnown RBP19.37■□□□□ 0.69
USP43-202ENST00000570475 C22orf23Q9BZE7 217 aa19.37■□□□□ 0.69
USP43-202ENST00000570475 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
USP43-202ENST00000570475 MLECQ14165 292 aa19.36■□□□□ 0.69
USP43-202ENST00000570475 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
USP43-202ENST00000570475 TBC1D2Q9BYX2 928 aa19.35■□□□□ 0.69
USP43-202ENST00000570475 TTC37Q6PGP7 1564 aa19.35■□□□□ 0.69
USP43-202ENST00000570475 PLCH2O75038 1416 aa19.35■□□□□ 0.69
USP43-202ENST00000570475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms