RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-208ENST00000570242 CLIP1P30622 1438 aa14.75□□□□□ -0.05
ITGAM-208ENST00000570242 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
ITGAM-208ENST00000570242 CCDC18Q5T9S5 1454 aa14.75□□□□□ -0.05
ITGAM-208ENST00000570242 FYCO1Q9BQS8 1478 aa14.75□□□□□ -0.05
ITGAM-208ENST00000570242 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
ITGAM-208ENST00000570242 CDK11AQ9UQ88 783 aaPredicted RBP14.73□□□□□ -0.05
ITGAM-208ENST00000570242 ADAMTSL3P82987 1691 aa14.73□□□□□ -0.05
ITGAM-208ENST00000570242 POGZQ7Z3K3 1410 aa14.73□□□□□ -0.05
ITGAM-208ENST00000570242 BCORL1Q5H9F3 1711 aa14.72□□□□□ -0.05
ITGAM-208ENST00000570242 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
ITGAM-208ENST00000570242 CDC42BPBQ9Y5S2 1711 aa14.7□□□□□ -0.06
ITGAM-208ENST00000570242 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
ITGAM-208ENST00000570242 YEATS2Q9ULM3 1422 aa14.7□□□□□ -0.06
ITGAM-208ENST00000570242 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
ITGAM-208ENST00000570242 ARHGAP5Q13017 1502 aa14.69□□□□□ -0.06
ITGAM-208ENST00000570242 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
ITGAM-208ENST00000570242 HECW2Q9P2P5 1572 aa14.68□□□□□ -0.06
ITGAM-208ENST00000570242 ST18O60284 1047 aa14.68□□□□□ -0.06
ITGAM-208ENST00000570242 SLC34A2O95436 690 aa14.68□□□□□ -0.06
ITGAM-208ENST00000570242 MAGI2Q86UL8 1455 aa14.68□□□□□ -0.06
ITGAM-208ENST00000570242 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
ITGAM-208ENST00000570242 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
ITGAM-208ENST00000570242 KDM5CP41229 1560 aa14.66□□□□□ -0.06
ITGAM-208ENST00000570242 PTPRMP28827 1452 aa14.66□□□□□ -0.06
ITGAM-208ENST00000570242 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
ITGAM-208ENST00000570242 CDC42BPAQ5VT25 1732 aa14.66□□□□□ -0.06
ITGAM-208ENST00000570242 CEP162Q5TB80 1403 aa14.65□□□□□ -0.06
ITGAM-208ENST00000570242 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
ITGAM-208ENST00000570242 UPF1Q92900 1129 aaKnown RBP eCLIP14.64□□□□□ -0.07
ITGAM-208ENST00000570242 ABCC1P33527 1531 aa14.64□□□□□ -0.07
ITGAM-208ENST00000570242 ZNF518AQ6AHZ1 1483 aa14.63□□□□□ -0.07
ITGAM-208ENST00000570242 PTCD2Q8WV60 388 aaKnown RBP14.63□□□□□ -0.07
ITGAM-208ENST00000570242 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
ITGAM-208ENST00000570242 ARHGEF12Q9NZN5 1544 aa14.62□□□□□ -0.07
ITGAM-208ENST00000570242 RIMS1Q86UR5 1692 aaKnown RBP14.62□□□□□ -0.07
ITGAM-208ENST00000570242 TBC1D12O60347 775 aa14.62□□□□□ -0.07
ITGAM-208ENST00000570242 E2F4Q16254 413 aa14.62□□□□□ -0.07
ITGAM-208ENST00000570242 PCDHGA4Q9Y5G9 962 aa14.62□□□□□ -0.07
ITGAM-208ENST00000570242 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
ITGAM-208ENST00000570242 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
ITGAM-208ENST00000570242 ARSIQ5FYB1 569 aa14.61□□□□□ -0.07
ITGAM-208ENST00000570242 KDM2AQ9Y2K7 1162 aa14.61□□□□□ -0.07
ITGAM-208ENST00000570242 LCE2DQ5TA82 110 aaPredicted RBP14.6□□□□□ -0.07
ITGAM-208ENST00000570242 GPR153Q6NV75 609 aa14.6□□□□□ -0.07
ITGAM-208ENST00000570242 DIP2CQ9Y2E4 1556 aa14.6□□□□□ -0.07
ITGAM-208ENST00000570242 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
ITGAM-208ENST00000570242 ATP10AO60312 1499 aa14.59□□□□□ -0.07
ITGAM-208ENST00000570242 HOXB1P14653 301 aaPredicted RBP14.59□□□□□ -0.07
ITGAM-208ENST00000570242 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
ITGAM-208ENST00000570242 EMILIN3Q9NT22 766 aa14.59□□□□□ -0.07
ITGAM-208ENST00000570242 GPATCH8Q9UKJ3 1502 aaKnown RBP14.59□□□□□ -0.07
ITGAM-208ENST00000570242 SAMD9LQ8IVG5 1584 aa14.59□□□□□ -0.07
ITGAM-208ENST00000570242 TRAPPC8Q9Y2L5 1435 aa14.58□□□□□ -0.07
ITGAM-208ENST00000570242 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
ITGAM-208ENST00000570242 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
ITGAM-208ENST00000570242 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.08
ITGAM-208ENST00000570242 FER1L4A9Z1Z3 1794 aa14.57□□□□□ -0.08
ITGAM-208ENST00000570242 MLH3Q9UHC1 1453 aa14.57□□□□□ -0.08
ITGAM-208ENST00000570242 MAP3K9P80192 1104 aa14.56□□□□□ -0.08
ITGAM-208ENST00000570242 REREQ9P2R6 1566 aa14.56□□□□□ -0.08
ITGAM-208ENST00000570242 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
ITGAM-208ENST00000570242 SYCP2Q9BX26 1530 aa14.55□□□□□ -0.08
ITGAM-208ENST00000570242 NUDT7P0C024 238 aa14.54□□□□□ -0.08
ITGAM-208ENST00000570242 MARVELD3Q96A59 401 aa14.54□□□□□ -0.08
ITGAM-208ENST00000570242 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
ITGAM-208ENST00000570242 TIAM1Q13009 1591 aa14.54□□□□□ -0.08
ITGAM-208ENST00000570242 KIDINS220Q9ULH0 1771 aa14.54□□□□□ -0.08
ITGAM-208ENST00000570242 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.08
ITGAM-208ENST00000570242 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
ITGAM-208ENST00000570242 EMP3P54852 163 aa14.52□□□□□ -0.09
ITGAM-208ENST00000570242 MLECQ14165 292 aa14.52□□□□□ -0.09
ITGAM-208ENST00000570242 CCNB3Q8WWL7 1395 aa14.5□□□□□ -0.09
ITGAM-208ENST00000570242 DPYSL4O14531 572 aa14.5□□□□□ -0.09
ITGAM-208ENST00000570242 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
ITGAM-208ENST00000570242 ZNF777Q9ULD5 760 aaPredicted RBP14.49□□□□□ -0.09
ITGAM-208ENST00000570242 AGLP35573 1532 aa14.49□□□□□ -0.09
ITGAM-208ENST00000570242 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
ITGAM-208ENST00000570242 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
ITGAM-208ENST00000570242 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
ITGAM-208ENST00000570242 KCNV2Q8TDN2 545 aa14.48□□□□□ -0.09
ITGAM-208ENST00000570242 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
ITGAM-208ENST00000570242 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
ITGAM-208ENST00000570242 MYT1LQ9UL68 1186 aa14.47□□□□□ -0.09
ITGAM-208ENST00000570242 ATP7AQ04656 1500 aa14.46□□□□□ -0.09
ITGAM-208ENST00000570242 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
ITGAM-208ENST00000570242 EVI5O60447 810 aa14.46□□□□□ -0.09
ITGAM-208ENST00000570242 HNRNPMP52272 730 aaKnown RBP eCLIP14.46□□□□□ -0.09
ITGAM-208ENST00000570242 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.1
ITGAM-208ENST00000570242 ERBB3P21860 1342 aa14.45□□□□□ -0.1
ITGAM-208ENST00000570242 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
ITGAM-208ENST00000570242 PLXNC1O60486 1568 aa14.44□□□□□ -0.1
ITGAM-208ENST00000570242 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
ITGAM-208ENST00000570242 ARIH1Q9Y4X5 557 aaPredicted RBP14.44□□□□□ -0.1
ITGAM-208ENST00000570242 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
ITGAM-208ENST00000570242 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
ITGAM-208ENST00000570242 POTEMA6NI47 508 aa14.43□□□□□ -0.1
ITGAM-208ENST00000570242 POTEGQ6S5H5 508 aa14.43□□□□□ -0.1
ITGAM-208ENST00000570242 ARHGEF1Q92888 912 aaKnown RBP14.43□□□□□ -0.1
ITGAM-208ENST00000570242 LHX6Q9UPM6 363 aa14.43□□□□□ -0.1
ITGAM-208ENST00000570242 SPAG9O60271 1321 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms