RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.15
RBFOX1-220ENST00000570188 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-220ENST00000570188 A2MP01023 1474 aa14.06□□□□□ -0.16
RBFOX1-220ENST00000570188 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-220ENST00000570188 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
RBFOX1-220ENST00000570188 TET3O43151 1660 aa14.06□□□□□ -0.16
RBFOX1-220ENST00000570188 CEP152O94986 1710 aa14.06□□□□□ -0.16
RBFOX1-220ENST00000570188 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
RBFOX1-220ENST00000570188 TONSLQ96HA7 1378 aa14.05□□□□□ -0.16
RBFOX1-220ENST00000570188 ANKRD30BQ9BXX2 1392 aa14.05□□□□□ -0.16
RBFOX1-220ENST00000570188 E9PCH4 1651 aa14.04□□□□□ -0.16
RBFOX1-220ENST00000570188 RAPGEF3O95398 923 aa14.04□□□□□ -0.16
RBFOX1-220ENST00000570188 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
RBFOX1-220ENST00000570188 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
RBFOX1-220ENST00000570188 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
RBFOX1-220ENST00000570188 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.16
RBFOX1-220ENST00000570188 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
RBFOX1-220ENST00000570188 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
RBFOX1-220ENST00000570188 STK25O00506 426 aa14.01□□□□□ -0.17
RBFOX1-220ENST00000570188 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-220ENST00000570188 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
RBFOX1-220ENST00000570188 KANK1Q14678 1352 aa13.99□□□□□ -0.17
RBFOX1-220ENST00000570188 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 ZC3H13Q5T200 1668 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 KIF3BO15066 747 aa13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
RBFOX1-220ENST00000570188 EFCAB6Q5THR3 1501 aa13.97□□□□□ -0.17
RBFOX1-220ENST00000570188 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
RBFOX1-220ENST00000570188 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
RBFOX1-220ENST00000570188 ATP10AO60312 1499 aa13.94□□□□□ -0.18
RBFOX1-220ENST00000570188 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
RBFOX1-220ENST00000570188 PYGBP11216 843 aa13.94□□□□□ -0.18
RBFOX1-220ENST00000570188 TRPM2O94759 1503 aa13.94□□□□□ -0.18
RBFOX1-220ENST00000570188 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
RBFOX1-220ENST00000570188 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 PPP1R15AO75807 674 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 ABCC3O15438 1527 aa13.93□□□□□ -0.18
RBFOX1-220ENST00000570188 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
RBFOX1-220ENST00000570188 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-220ENST00000570188 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
RBFOX1-220ENST00000570188 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
RBFOX1-220ENST00000570188 KIF1BO60333 1816 aa13.91□□□□□ -0.18
RBFOX1-220ENST00000570188 AGLP35573 1532 aa13.9□□□□□ -0.18
RBFOX1-220ENST00000570188 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-220ENST00000570188 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
RBFOX1-220ENST00000570188 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
RBFOX1-220ENST00000570188 GGT6Q6P531 493 aa13.88□□□□□ -0.19
RBFOX1-220ENST00000570188 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-220ENST00000570188 PTPRTO14522 1441 aa13.87□□□□□ -0.19
RBFOX1-220ENST00000570188 NBR1Q14596 966 aa13.86□□□□□ -0.19
RBFOX1-220ENST00000570188 MROH2AA6NES4 1674 aa13.85□□□□□ -0.19
RBFOX1-220ENST00000570188 PREX1Q8TCU6 1659 aa13.85□□□□□ -0.19
RBFOX1-220ENST00000570188 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
RBFOX1-220ENST00000570188 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.19
RBFOX1-220ENST00000570188 IFT172Q9UG01 1749 aa13.83□□□□□ -0.2
RBFOX1-220ENST00000570188 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.2
RBFOX1-220ENST00000570188 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
RBFOX1-220ENST00000570188 NPATQ14207 1427 aa13.82□□□□□ -0.2
RBFOX1-220ENST00000570188 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
RBFOX1-220ENST00000570188 PIK3C2BO00750 1634 aa13.81□□□□□ -0.2
RBFOX1-220ENST00000570188 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
RBFOX1-220ENST00000570188 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
RBFOX1-220ENST00000570188 SYNMO15061 1565 aa13.8□□□□□ -0.2
RBFOX1-220ENST00000570188 ARHGAP31Q2M1Z3 1444 aa13.8□□□□□ -0.2
RBFOX1-220ENST00000570188 SPATA31E1Q6ZUB1 1445 aa13.8□□□□□ -0.2
RBFOX1-220ENST00000570188 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
RBFOX1-220ENST00000570188 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
RBFOX1-220ENST00000570188 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-220ENST00000570188 MYO5BQ9ULV0 1848 aa13.78□□□□□ -0.2
RBFOX1-220ENST00000570188 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-220ENST00000570188 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
RBFOX1-220ENST00000570188 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
RBFOX1-220ENST00000570188 PPLO60437 1756 aa13.77□□□□□ -0.21
RBFOX1-220ENST00000570188 NOS1P29475 1434 aa13.77□□□□□ -0.21
RBFOX1-220ENST00000570188 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-220ENST00000570188 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-220ENST00000570188 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
RBFOX1-220ENST00000570188 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
RBFOX1-220ENST00000570188 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
RBFOX1-220ENST00000570188 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
RBFOX1-220ENST00000570188 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-220ENST00000570188 LAMC1P11047 1609 aa13.75□□□□□ -0.21
RBFOX1-220ENST00000570188 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-220ENST00000570188 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
RBFOX1-220ENST00000570188 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
RBFOX1-220ENST00000570188 MLECQ14165 292 aa13.73□□□□□ -0.21
RBFOX1-220ENST00000570188 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
RBFOX1-220ENST00000570188 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-220ENST00000570188 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
RBFOX1-220ENST00000570188 MYOM2P54296 1465 aa13.71□□□□□ -0.21
RBFOX1-220ENST00000570188 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
RBFOX1-220ENST00000570188 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-220ENST00000570188 TMEM131LA2VDJ0 1609 aa13.7□□□□□ -0.22
RBFOX1-220ENST00000570188 HSPA5P11021 654 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-220ENST00000570188 C3P01024 1663 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms