RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 PTPRTO14522 1441 aa19.08■□□□□ 0.64
GCOM1-213ENST00000569945 TIMELESSQ9UNS1 1208 aa19.07■□□□□ 0.64
GCOM1-213ENST00000569945 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
GCOM1-213ENST00000569945 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
GCOM1-213ENST00000569945 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
GCOM1-213ENST00000569945 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
GCOM1-213ENST00000569945 NOS1P29475 1434 aa19.06■□□□□ 0.64
GCOM1-213ENST00000569945 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
GCOM1-213ENST00000569945 SYNMO15061 1565 aa19.06■□□□□ 0.64
GCOM1-213ENST00000569945 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
GCOM1-213ENST00000569945 ZBTB47Q9UFB7 747 aaPredicted RBP19.03■□□□□ 0.64
GCOM1-213ENST00000569945 PTPRMP28827 1452 aa19.03■□□□□ 0.64
GCOM1-213ENST00000569945 TRPM2O94759 1503 aa19.03■□□□□ 0.64
GCOM1-213ENST00000569945 ANP32AP39687 249 aaKnown RBP19.03■□□□□ 0.64
GCOM1-213ENST00000569945 CLTCL1P53675 1640 aa19.03■□□□□ 0.64
GCOM1-213ENST00000569945 IDI1Q13907 227 aa19.02■□□□□ 0.64
GCOM1-213ENST00000569945 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
GCOM1-213ENST00000569945 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
GCOM1-213ENST00000569945 TNRQ92752 1358 aa18.99■□□□□ 0.63
GCOM1-213ENST00000569945 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
GCOM1-213ENST00000569945 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
GCOM1-213ENST00000569945 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
GCOM1-213ENST00000569945 PIK3C2BO00750 1634 aa18.96■□□□□ 0.63
GCOM1-213ENST00000569945 PKNOX2Q96KN3 472 aa18.93■□□□□ 0.62
GCOM1-213ENST00000569945 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
GCOM1-213ENST00000569945 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
GCOM1-213ENST00000569945 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
GCOM1-213ENST00000569945 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
GCOM1-213ENST00000569945 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
GCOM1-213ENST00000569945 KIF1BO60333 1816 aa18.89■□□□□ 0.61
GCOM1-213ENST00000569945 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
GCOM1-213ENST00000569945 MYO3AQ8NEV4 1616 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 BRPF3Q9ULD4 1205 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 TMEM131LA2VDJ0 1609 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
GCOM1-213ENST00000569945 SENP3Q9H4L4 574 aaPredicted RBP18.88■□□□□ 0.61
GCOM1-213ENST00000569945 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
GCOM1-213ENST00000569945 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
GCOM1-213ENST00000569945 NEFMP07197 916 aa18.87■□□□□ 0.61
GCOM1-213ENST00000569945 A2ML1A8K2U0 1454 aa18.86■□□□□ 0.61
GCOM1-213ENST00000569945 DCAF11Q8TEB1 546 aa18.86■□□□□ 0.61
GCOM1-213ENST00000569945 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
GCOM1-213ENST00000569945 NLRP1Q9C000 1473 aa18.85■□□□□ 0.61
GCOM1-213ENST00000569945 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
GCOM1-213ENST00000569945 UBR1Q8IWV7 1749 aa18.84■□□□□ 0.61
GCOM1-213ENST00000569945 CEP170BQ9Y4F5 1589 aaPredicted RBP18.82■□□□□ 0.6
GCOM1-213ENST00000569945 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
GCOM1-213ENST00000569945 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
GCOM1-213ENST00000569945 UHRF1BP1Q6BDS2 1440 aa18.8■□□□□ 0.6
GCOM1-213ENST00000569945 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
GCOM1-213ENST00000569945 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
GCOM1-213ENST00000569945 RSPH6AQ9H0K4 717 aa18.79■□□□□ 0.6
GCOM1-213ENST00000569945 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
GCOM1-213ENST00000569945 NEXMIFQ5QGS0 1516 aa18.78■□□□□ 0.6
GCOM1-213ENST00000569945 NEURL4Q96JN8 1562 aa18.78■□□□□ 0.6
GCOM1-213ENST00000569945 HSPA2P54652 639 aa18.78■□□□□ 0.6
GCOM1-213ENST00000569945 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
GCOM1-213ENST00000569945 LTKP29376 864 aa18.77■□□□□ 0.6
GCOM1-213ENST00000569945 RIMS2Q9UQ26 1411 aa18.77■□□□□ 0.59
GCOM1-213ENST00000569945 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.59
GCOM1-213ENST00000569945 TMEM2Q9UHN6 1383 aa18.76■□□□□ 0.59
GCOM1-213ENST00000569945 IFT172Q9UG01 1749 aa18.76■□□□□ 0.59
GCOM1-213ENST00000569945 PPLO60437 1756 aa18.76■□□□□ 0.59
GCOM1-213ENST00000569945 GSE1Q14687 1217 aa18.75■□□□□ 0.59
GCOM1-213ENST00000569945 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
GCOM1-213ENST00000569945 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
GCOM1-213ENST00000569945 KDM5AP29375 1690 aaKnown RBP18.74■□□□□ 0.59
GCOM1-213ENST00000569945 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
GCOM1-213ENST00000569945 RPGRIP1LQ68CZ1 1315 aa18.73■□□□□ 0.59
GCOM1-213ENST00000569945 LMTK3Q96Q04 1460 aa18.73■□□□□ 0.59
GCOM1-213ENST00000569945 TXNDC2Q86VQ3 553 aa18.72■□□□□ 0.59
GCOM1-213ENST00000569945 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
GCOM1-213ENST00000569945 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
GCOM1-213ENST00000569945 SLIT1O75093 1534 aa18.71■□□□□ 0.59
GCOM1-213ENST00000569945 MYOM2P54296 1465 aa18.69■□□□□ 0.58
GCOM1-213ENST00000569945 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
GCOM1-213ENST00000569945 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
GCOM1-213ENST00000569945 NBPF1Q3BBV0 1214 aa18.69■□□□□ 0.58
GCOM1-213ENST00000569945 CFAP70Q5T0N1 1121 aa18.69■□□□□ 0.58
GCOM1-213ENST00000569945 FAM43AQ8N2R8 423 aa18.68■□□□□ 0.58
GCOM1-213ENST00000569945 NRXN1Q9ULB1 1477 aa18.68■□□□□ 0.58
GCOM1-213ENST00000569945 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
GCOM1-213ENST00000569945 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
GCOM1-213ENST00000569945 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
GCOM1-213ENST00000569945 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.66■□□□□ 0.58
GCOM1-213ENST00000569945 PRKRIP1Q9H875 184 aaPredicted RBP18.66■□□□□ 0.58
GCOM1-213ENST00000569945 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
GCOM1-213ENST00000569945 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
GCOM1-213ENST00000569945 ANKLE2Q86XL3 938 aa18.65■□□□□ 0.58
GCOM1-213ENST00000569945 TMEM132EQ6IEE7 984 aa18.63■□□□□ 0.57
GCOM1-213ENST00000569945 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
GCOM1-213ENST00000569945 SLC26A8Q96RN1 970 aa18.63■□□□□ 0.57
GCOM1-213ENST00000569945 NRXN3Q9Y4C0 1643 aa18.63■□□□□ 0.57
GCOM1-213ENST00000569945 HDGFP51858 240 aaKnown RBP18.62■□□□□ 0.57
GCOM1-213ENST00000569945 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
GCOM1-213ENST00000569945 TRPM1Q7Z4N2 1603 aa18.62■□□□□ 0.57
GCOM1-213ENST00000569945 STAC3Q96MF2 364 aa18.62■□□□□ 0.57
GCOM1-213ENST00000569945 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms