RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PCDHB3Q9Y5E6 796 aa13.58□□□□□ -0.24
CHD9-220ENST00000569794 LCE2BO14633 110 aa13.57□□□□□ -0.24
CHD9-220ENST00000569794 NRG2O14511 850 aaPredicted RBP13.55□□□□□ -0.24
CHD9-220ENST00000569794 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
CHD9-220ENST00000569794 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
CHD9-220ENST00000569794 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
CHD9-220ENST00000569794 SEMA3EO15041 775 aa13.54□□□□□ -0.24
CHD9-220ENST00000569794 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
CHD9-220ENST00000569794 FCHSD2O94868 740 aa13.52□□□□□ -0.25
CHD9-220ENST00000569794 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.25
CHD9-220ENST00000569794 ACTN4O43707 911 aaKnown RBP13.49□□□□□ -0.25
CHD9-220ENST00000569794 KMT5BQ4FZB7 885 aa13.48□□□□□ -0.25
CHD9-220ENST00000569794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
CHD9-220ENST00000569794 TLL1O43897 1013 aa13.47□□□□□ -0.25
CHD9-220ENST00000569794 CFHP08603 1231 aa13.47□□□□□ -0.25
CHD9-220ENST00000569794 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
CHD9-220ENST00000569794 RNF223E7ERA6 249 aa13.46□□□□□ -0.25
CHD9-220ENST00000569794 SLC10A3P09131 477 aa13.45□□□□□ -0.26
CHD9-220ENST00000569794 PXYLP1Q8TE99 480 aa13.44□□□□□ -0.26
CHD9-220ENST00000569794 OATP04181 439 aa13.43□□□□□ -0.26
CHD9-220ENST00000569794 HIC1Q14526 733 aa13.42□□□□□ -0.26
CHD9-220ENST00000569794 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
CHD9-220ENST00000569794 EMID1Q96A84 441 aaPredicted RBP13.41□□□□□ -0.26
CHD9-220ENST00000569794 SLC19A1P41440 591 aa13.4□□□□□ -0.26
CHD9-220ENST00000569794 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
CHD9-220ENST00000569794 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
CHD9-220ENST00000569794 S1PR4O95977 384 aa13.38□□□□□ -0.27
CHD9-220ENST00000569794 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
CHD9-220ENST00000569794 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
CHD9-220ENST00000569794 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
CHD9-220ENST00000569794 NR1I2O75469 434 aa13.36□□□□□ -0.27
CHD9-220ENST00000569794 ADH1BP00325 375 aa13.36□□□□□ -0.27
CHD9-220ENST00000569794 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
CHD9-220ENST00000569794 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
CHD9-220ENST00000569794 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
CHD9-220ENST00000569794 FECHP22830 423 aa13.33□□□□□ -0.28
CHD9-220ENST00000569794 GNPATO15228 680 aa13.32□□□□□ -0.28
CHD9-220ENST00000569794 GPR37O15354 613 aa13.32□□□□□ -0.28
CHD9-220ENST00000569794 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
CHD9-220ENST00000569794 LIAT1Q6ZQX7 453 aa13.31□□□□□ -0.28
CHD9-220ENST00000569794 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
CHD9-220ENST00000569794 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
CHD9-220ENST00000569794 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
CHD9-220ENST00000569794 SLC6A16Q9GZN6 736 aa13.29□□□□□ -0.28
CHD9-220ENST00000569794 PRR20EP86478 221 aa13.27□□□□□ -0.29
CHD9-220ENST00000569794 PRR20CP86479 221 aa13.27□□□□□ -0.29
CHD9-220ENST00000569794 PRR20DP86480 221 aa13.27□□□□□ -0.29
CHD9-220ENST00000569794 PRR20BP86481 221 aa13.27□□□□□ -0.29
CHD9-220ENST00000569794 PRR20AP86496 221 aa13.27□□□□□ -0.29
CHD9-220ENST00000569794 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
CHD9-220ENST00000569794 ZNF697Q5TEC3 545 aa13.26□□□□□ -0.29
CHD9-220ENST00000569794 PLA2G2CQ5R387 149 aa13.25□□□□□ -0.29
CHD9-220ENST00000569794 SPSB2Q99619 263 aa13.25□□□□□ -0.29
CHD9-220ENST00000569794 ZNF787Q6DD87 383 aa13.24□□□□□ -0.29
CHD9-220ENST00000569794 RDH13Q8NBN7 331 aa13.24□□□□□ -0.29
CHD9-220ENST00000569794 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
CHD9-220ENST00000569794 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
CHD9-220ENST00000569794 MORN1Q5T089 497 aa13.22□□□□□ -0.29
CHD9-220ENST00000569794 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
CHD9-220ENST00000569794 GDF9O60383 454 aa13.21□□□□□ -0.29
CHD9-220ENST00000569794 DGAT1O75907 488 aa13.21□□□□□ -0.29
CHD9-220ENST00000569794 FUT2Q10981 343 aa13.21□□□□□ -0.29
CHD9-220ENST00000569794 PHOX2BQ99453 314 aa13.2□□□□□ -0.3
CHD9-220ENST00000569794 MYT1Q01538 1121 aa13.19□□□□□ -0.3
CHD9-220ENST00000569794 TNFRSF10AO00220 468 aa13.18□□□□□ -0.3
CHD9-220ENST00000569794 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
CHD9-220ENST00000569794 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
CHD9-220ENST00000569794 GCGRP47871 477 aa13.17□□□□□ -0.3
CHD9-220ENST00000569794 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
CHD9-220ENST00000569794 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
CHD9-220ENST00000569794 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
CHD9-220ENST00000569794 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
CHD9-220ENST00000569794 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
CHD9-220ENST00000569794 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
CHD9-220ENST00000569794 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
CHD9-220ENST00000569794 RPIAP49247 311 aa13.11□□□□□ -0.31
CHD9-220ENST00000569794 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
CHD9-220ENST00000569794 FCF1Q9Y324 198 aaKnown RBP13.11□□□□□ -0.31
CHD9-220ENST00000569794 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
CHD9-220ENST00000569794 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
CHD9-220ENST00000569794 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
CHD9-220ENST00000569794 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
CHD9-220ENST00000569794 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
CHD9-220ENST00000569794 FOXC1Q12948 553 aa13.08□□□□□ -0.32
CHD9-220ENST00000569794 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
CHD9-220ENST00000569794 POTECB2RU33 542 aa13.05□□□□□ -0.32
CHD9-220ENST00000569794 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
CHD9-220ENST00000569794 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
CHD9-220ENST00000569794 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
CHD9-220ENST00000569794 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
CHD9-220ENST00000569794 ST8SIA5O15466 376 aa13.03□□□□□ -0.32
CHD9-220ENST00000569794 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
CHD9-220ENST00000569794 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
CHD9-220ENST00000569794 CD46P15529 392 aa13.01□□□□□ -0.33
CHD9-220ENST00000569794 TOR4AQ9NXH8 423 aa13.01□□□□□ -0.33
CHD9-220ENST00000569794 Q3C1V9 767 aa12.99□□□□□ -0.33
CHD9-220ENST00000569794 IRF6O14896 467 aa12.98□□□□□ -0.33
CHD9-220ENST00000569794 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
CHD9-220ENST00000569794 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
CHD9-220ENST00000569794 ZBTB24O43167 697 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms