RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
CDH13-212ENST00000569144 CEP170BQ9Y4F5 1589 aaPredicted RBP9.86□□□□□ -0.83
CDH13-212ENST00000569144 SEC24BO95487 1268 aa9.85□□□□□ -0.83
CDH13-212ENST00000569144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH13-212ENST00000569144 ATP1B4Q9UN42 357 aaPredicted RBP9.85□□□□□ -0.83
CDH13-212ENST00000569144 CPS1P31327 1500 aa9.85□□□□□ -0.83
CDH13-212ENST00000569144 KIDINS220Q9ULH0 1771 aa9.85□□□□□ -0.83
CDH13-212ENST00000569144 ITSN2Q9NZM3 1697 aa9.84□□□□□ -0.83
CDH13-212ENST00000569144 PTPRKQ15262 1439 aa9.84□□□□□ -0.83
CDH13-212ENST00000569144 SOX12O15370 315 aa9.84□□□□□ -0.83
CDH13-212ENST00000569144 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
CDH13-212ENST00000569144 PHF8Q9UPP1 1060 aa9.84□□□□□ -0.83
CDH13-212ENST00000569144 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
CDH13-212ENST00000569144 CDC42BPBQ9Y5S2 1711 aa9.84□□□□□ -0.83
CDH13-212ENST00000569144 PREX2Q70Z35 1606 aa9.83□□□□□ -0.84
CDH13-212ENST00000569144 PLCG2P16885 1265 aa9.83□□□□□ -0.84
CDH13-212ENST00000569144 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
CDH13-212ENST00000569144 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
CDH13-212ENST00000569144 MFRPQ9BY79 579 aa9.82□□□□□ -0.84
CDH13-212ENST00000569144 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
CDH13-212ENST00000569144 SAMD9LQ8IVG5 1584 aa9.81□□□□□ -0.84
CDH13-212ENST00000569144 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
CDH13-212ENST00000569144 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
CDH13-212ENST00000569144 NLRP6P59044 892 aa9.81□□□□□ -0.84
CDH13-212ENST00000569144 SUPT6HQ7KZ85 1726 aaKnown RBP9.81□□□□□ -0.84
CDH13-212ENST00000569144 CLTCQ00610 1675 aaKnown RBP9.8□□□□□ -0.84
CDH13-212ENST00000569144 A2ML1A8K2U0 1454 aa9.8□□□□□ -0.84
CDH13-212ENST00000569144 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
CDH13-212ENST00000569144 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
CDH13-212ENST00000569144 NEURL4Q96JN8 1562 aa9.79□□□□□ -0.84
CDH13-212ENST00000569144 SPAG9O60271 1321 aaKnown RBP9.79□□□□□ -0.84
CDH13-212ENST00000569144 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
CDH13-212ENST00000569144 ALKQ9UM73 1620 aa9.78□□□□□ -0.84
CDH13-212ENST00000569144 PDCD7Q8N8D1 485 aaKnown RBP9.78□□□□□ -0.84
CDH13-212ENST00000569144 FBXO22Q8NEZ5 403 aa9.78□□□□□ -0.84
CDH13-212ENST00000569144 A2MP01023 1474 aa9.78□□□□□ -0.84
CDH13-212ENST00000569144 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
CDH13-212ENST00000569144 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
CDH13-212ENST00000569144 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
CDH13-212ENST00000569144 DPY19L2Q6NUT2 758 aa9.76□□□□□ -0.85
CDH13-212ENST00000569144 GGT6Q6P531 493 aa9.76□□□□□ -0.85
CDH13-212ENST00000569144 SYCP2Q9BX26 1530 aa9.76□□□□□ -0.85
CDH13-212ENST00000569144 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
CDH13-212ENST00000569144 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
CDH13-212ENST00000569144 CCDC18Q5T9S5 1454 aa9.75□□□□□ -0.85
CDH13-212ENST00000569144 LRRIQ1Q96JM4 1722 aa9.75□□□□□ -0.85
CDH13-212ENST00000569144 INO80Q9ULG1 1556 aaPredicted RBP9.75□□□□□ -0.85
CDH13-212ENST00000569144 KIAA1107Q9UPP5 1409 aa9.74□□□□□ -0.85
CDH13-212ENST00000569144 CDC42BPAQ5VT25 1732 aa9.74□□□□□ -0.85
CDH13-212ENST00000569144 RGS17Q9UGC6 210 aaPredicted RBP9.74□□□□□ -0.85
CDH13-212ENST00000569144 TNRQ92752 1358 aa9.74□□□□□ -0.85
CDH13-212ENST00000569144 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
CDH13-212ENST00000569144 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
CDH13-212ENST00000569144 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDH13-212ENST00000569144 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
CDH13-212ENST00000569144 RYDENQ9NUL5 291 aaKnown RBP9.73□□□□□ -0.85
CDH13-212ENST00000569144 ZNF777Q9ULD5 760 aaPredicted RBP9.73□□□□□ -0.85
CDH13-212ENST00000569144 MED14O60244 1454 aa9.72□□□□□ -0.85
CDH13-212ENST00000569144 PLEKHH2Q8IVE3 1493 aa9.72□□□□□ -0.85
CDH13-212ENST00000569144 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
CDH13-212ENST00000569144 NPHP4O75161 1426 aaPredicted RBP9.72□□□□□ -0.85
CDH13-212ENST00000569144 GPATCH8Q9UKJ3 1502 aaKnown RBP9.72□□□□□ -0.85
CDH13-212ENST00000569144 RNF17Q9BXT8 1623 aaKnown RBP9.71□□□□□ -0.85
CDH13-212ENST00000569144 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
CDH13-212ENST00000569144 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
CDH13-212ENST00000569144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDH13-212ENST00000569144 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
CDH13-212ENST00000569144 PZPP20742 1482 aa9.71□□□□□ -0.86
CDH13-212ENST00000569144 LRRC7Q96NW7 1537 aa9.71□□□□□ -0.86
CDH13-212ENST00000569144 DEPDC5O75140 1603 aa9.71□□□□□ -0.86
CDH13-212ENST00000569144 THEMISQ8N1K5 641 aaPredicted RBP9.7□□□□□ -0.86
CDH13-212ENST00000569144 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
CDH13-212ENST00000569144 FAM135AQ9P2D6 1515 aa9.7□□□□□ -0.86
CDH13-212ENST00000569144 SYNMO15061 1565 aa9.7□□□□□ -0.86
CDH13-212ENST00000569144 ADGBQ8N7X0 1667 aa9.7□□□□□ -0.86
CDH13-212ENST00000569144 PPP1R37O75864 691 aa9.69□□□□□ -0.86
CDH13-212ENST00000569144 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
CDH13-212ENST00000569144 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
CDH13-212ENST00000569144 NLRP1Q9C000 1473 aa9.69□□□□□ -0.86
CDH13-212ENST00000569144 UGGT1Q9NYU2 1555 aa9.68□□□□□ -0.86
CDH13-212ENST00000569144 G3V3G9 751 aa9.68□□□□□ -0.86
CDH13-212ENST00000569144 POTEJP0CG39 1038 aa9.68□□□□□ -0.86
CDH13-212ENST00000569144 LHX8Q68G74 356 aa9.68□□□□□ -0.86
CDH13-212ENST00000569144 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
CDH13-212ENST00000569144 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
CDH13-212ENST00000569144 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
CDH13-212ENST00000569144 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
CDH13-212ENST00000569144 DHX29Q7Z478 1369 aaKnown RBP9.67□□□□□ -0.86
CDH13-212ENST00000569144 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
CDH13-212ENST00000569144 CFDP1Q9UEE9 299 aaPredicted RBP9.67□□□□□ -0.86
CDH13-212ENST00000569144 RTEL1-TNFRSF6BF6WH68 1400 aa9.66□□□□□ -0.86
CDH13-212ENST00000569144 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
CDH13-212ENST00000569144 STRCP1A6NGW2 1772 aa9.65□□□□□ -0.86
CDH13-212ENST00000569144 CCNB3Q8WWL7 1395 aa9.64□□□□□ -0.87
CDH13-212ENST00000569144 KIF3BO15066 747 aa9.64□□□□□ -0.87
CDH13-212ENST00000569144 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
CDH13-212ENST00000569144 MBD5Q9P267 1494 aa9.64□□□□□ -0.87
CDH13-212ENST00000569144 FAM135BQ49AJ0 1406 aa9.64□□□□□ -0.87
CDH13-212ENST00000569144 WASHC2CQ9Y4E1 1318 aa9.63□□□□□ -0.87
CDH13-212ENST00000569144 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms