RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 DAPK1P53355 1430 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 FGD6Q6ZV73 1430 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 ERBINQ96RT1 1412 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 SHANK2Q9UPX8 1470 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 ABCC3O15438 1527 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 CROCC2H7BZ55 1655 aa7.15□□□□□ -1.27
HERPUD1-213ENST00000568358 TXNDC2Q86VQ3 553 aa7.14□□□□□ -1.27
HERPUD1-213ENST00000568358 CPS1P31327 1500 aa7.13□□□□□ -1.27
HERPUD1-213ENST00000568358 NPHP4O75161 1426 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-213ENST00000568358 PIP4K2BP78356 416 aa7.13□□□□□ -1.27
HERPUD1-213ENST00000568358 GTF3C3Q9Y5Q9 886 aa7.13□□□□□ -1.27
HERPUD1-213ENST00000568358 DEPDC5O75140 1603 aa7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 SPATA31D1Q6ZQQ2 1576 aa7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 ERVK-7P63135 1459 aa7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 HDGFP51858 240 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 HOMEZQ8IX15 550 aa7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 REM2Q8IYK8 340 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 IQGAP1P46940 1657 aa7.12□□□□□ -1.27
HERPUD1-213ENST00000568358 MED14O60244 1454 aa7.11□□□□□ -1.27
HERPUD1-213ENST00000568358 ARHGAP31Q2M1Z3 1444 aa7.11□□□□□ -1.27
HERPUD1-213ENST00000568358 PRDM15P57071 1507 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-213ENST00000568358 UBR1Q8IWV7 1749 aa7.1□□□□□ -1.27
HERPUD1-213ENST00000568358 MROH1Q8NDA8 1641 aa7.1□□□□□ -1.27
HERPUD1-213ENST00000568358 SLC52A1Q9NWF4 448 aa7.1□□□□□ -1.27
HERPUD1-213ENST00000568358 NEURL4Q96JN8 1562 aa7.1□□□□□ -1.27
HERPUD1-213ENST00000568358 LTKP29376 864 aa7.09□□□□□ -1.27
HERPUD1-213ENST00000568358 ITGAEP38570 1179 aa7.09□□□□□ -1.27
HERPUD1-213ENST00000568358 IDI1Q13907 227 aa7.09□□□□□ -1.27
HERPUD1-213ENST00000568358 SCAF11Q99590 1463 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-213ENST00000568358 ANKRD50Q9ULJ7 1429 aa7.09□□□□□ -1.28
HERPUD1-213ENST00000568358 SPDYE2BA6NHP3 402 aa7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 PPP1R15AO75807 674 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 SPDYE6P0CI01 402 aa7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 CHGAP10645 457 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 SPDYE2Q495Y8 402 aa7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 TMEM2Q9UHN6 1383 aa7.08□□□□□ -1.28
HERPUD1-213ENST00000568358 KDM5AP29375 1690 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 ADGRL2O95490 1459 aa7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 HSPA1LP34931 641 aa7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 PPARGC1BQ86YN6 1023 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 PIK3C2BO00750 1634 aa7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 VWDEQ8N2E2 1590 aa7.07□□□□□ -1.28
HERPUD1-213ENST00000568358 SLIT1O75093 1534 aa7.06□□□□□ -1.28
HERPUD1-213ENST00000568358 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
HERPUD1-213ENST00000568358 LMTK2Q8IWU2 1503 aa7.06□□□□□ -1.28
HERPUD1-213ENST00000568358 PROSER2Q86WR7 435 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-213ENST00000568358 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.06□□□□□ -1.28
HERPUD1-213ENST00000568358 RPRD2Q5VT52 1461 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 ARHGAP23Q9P227 1491 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 SOCS7O14512 581 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 KCNA6P17658 529 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 ILDR2Q71H61 639 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 SLC26A8Q96RN1 970 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 FBXO3Q9UK99 471 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 LRRC7Q96NW7 1537 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 ROCK1Q13464 1354 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 STRCP1A6NGW2 1772 aa7.05□□□□□ -1.28
HERPUD1-213ENST00000568358 SYNMO15061 1565 aa7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 TET3O43151 1660 aa7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 GCC2Q8IWJ2 1684 aa7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 BBXQ8WY36 941 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 NUP155O75694 1391 aa7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
HERPUD1-213ENST00000568358 NOS1P29475 1434 aa7.03□□□□□ -1.28
HERPUD1-213ENST00000568358 PITPNM1O00562 1244 aa7.03□□□□□ -1.28
HERPUD1-213ENST00000568358 ADGRB3O60242 1522 aa7.02□□□□□ -1.29
HERPUD1-213ENST00000568358 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
HERPUD1-213ENST00000568358 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
HERPUD1-213ENST00000568358 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
HERPUD1-213ENST00000568358 RIMS2Q9UQ26 1411 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 UNC13BO14795 1591 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 MSH6P52701 1360 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 TMEM94Q12767 1356 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 PROM2Q8N271 834 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 TBX22Q9Y458 520 aa7.01□□□□□ -1.29
HERPUD1-213ENST00000568358 E9PCH4 1651 aa7□□□□□ -1.29
HERPUD1-213ENST00000568358 PLEKHG1Q9ULL1 1385 aa7□□□□□ -1.29
HERPUD1-213ENST00000568358 CHD2O14647 1828 aaKnown RBP7□□□□□ -1.29
HERPUD1-213ENST00000568358 XIRP1Q702N8 1843 aaKnown RBP7□□□□□ -1.29
HERPUD1-213ENST00000568358 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
HERPUD1-213ENST00000568358 TRIM52Q96A61 297 aa7□□□□□ -1.29
HERPUD1-213ENST00000568358 TMEM131LA2VDJ0 1609 aa6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 IQGAP3Q86VI3 1631 aa6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 ATF3P18847 181 aa6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 FXR2P51116 673 aaKnown RBP eCLIP6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 RBM33Q96EV2 1170 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 SLAIN2Q9P270 581 aa6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 FAM135BQ49AJ0 1406 aa6.99□□□□□ -1.29
HERPUD1-213ENST00000568358 ZNF692Q9BU19 519 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-213ENST00000568358 MED1Q15648 1581 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-213ENST00000568358 NKTRP30414 1462 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-213ENST00000568358 ZFYVE9O95405 1425 aa6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 VASPP50552 380 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 MKRN4PQ13434 485 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 CADPS2Q86UW7 1296 aa6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 SPDYE1Q8NFV5 336 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 C19orf44Q9H6X5 657 aa6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms