RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 PDE3AQ14432 1141 aa32.07■■■□□ 2.72
FANCA-221ENST00000566889 HSP90AA2PQ14568 343 aaPredicted RBP32.07■■■□□ 2.72
FANCA-221ENST00000566889 NUP160Q12769 1436 aa32.04■■■□□ 2.72
FANCA-221ENST00000566889 FAM135AQ9P2D6 1515 aa32.04■■■□□ 2.72
FANCA-221ENST00000566889 PIK3C2GO75747 1445 aa32.03■■■□□ 2.72
FANCA-221ENST00000566889 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
FANCA-221ENST00000566889 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
FANCA-221ENST00000566889 A2MP01023 1474 aa32.02■■■□□ 2.72
FANCA-221ENST00000566889 ABCC2Q92887 1545 aa32.01■■■□□ 2.72
FANCA-221ENST00000566889 TBC1D32Q96NH3 1257 aa32.01■■■□□ 2.71
FANCA-221ENST00000566889 E9PSI1 815 aa32■■■□□ 2.71
FANCA-221ENST00000566889 CLUAP1Q96AJ1 413 aa32■■■□□ 2.71
FANCA-221ENST00000566889 KNSTRNQ9Y448 316 aa32■■■□□ 2.71
FANCA-221ENST00000566889 NGEFQ8N5V2 710 aa32■■■□□ 2.71
FANCA-221ENST00000566889 MCM4P33991 863 aa31.99■■■□□ 2.71
FANCA-221ENST00000566889 AAMPQ13685 434 aa31.99■■■□□ 2.71
FANCA-221ENST00000566889 VSIG10Q8N0Z9 540 aa31.99■■■□□ 2.71
FANCA-221ENST00000566889 MRE11P49959 708 aa31.98■■■□□ 2.71
FANCA-221ENST00000566889 TBC1D2Q9BYX2 928 aa31.98■■■□□ 2.71
FANCA-221ENST00000566889 ZMYND15Q9H091 742 aa31.98■■■□□ 2.71
FANCA-221ENST00000566889 CCDC141Q6ZP82 1450 aa31.97■■■□□ 2.71
FANCA-221ENST00000566889 WDR7Q9Y4E6 1490 aa31.97■■■□□ 2.71
FANCA-221ENST00000566889 BCAR3O75815 825 aa31.97■■■□□ 2.71
FANCA-221ENST00000566889 MAGI2Q86UL8 1455 aa31.96■■■□□ 2.71
FANCA-221ENST00000566889 ISY1Q9ULR0 285 aaKnown RBP31.96■■■□□ 2.71
FANCA-221ENST00000566889 PLXNC1O60486 1568 aa31.95■■■□□ 2.71
FANCA-221ENST00000566889 ARHGEF5Q12774 1597 aa31.95■■■□□ 2.7
FANCA-221ENST00000566889 SYNJ2O15056 1496 aa31.93■■■□□ 2.7
FANCA-221ENST00000566889 AMER1Q5JTC6 1135 aaPredicted RBP31.93■■■□□ 2.7
FANCA-221ENST00000566889 PMFBP1Q8TBY8 1022 aa31.92■■■□□ 2.7
FANCA-221ENST00000566889 NPC1L1Q9UHC9 1359 aa31.91■■■□□ 2.7
FANCA-221ENST00000566889 RGL3Q3MIN7 710 aa31.9■■■□□ 2.7
FANCA-221ENST00000566889 RNF17Q9BXT8 1623 aaKnown RBP31.9■■■□□ 2.7
FANCA-221ENST00000566889 SYNMO15061 1565 aa31.9■■■□□ 2.7
FANCA-221ENST00000566889 PANK2Q9BZ23 570 aa31.9■■■□□ 2.7
FANCA-221ENST00000566889 ASXL1Q8IXJ9 1541 aa31.89■■■□□ 2.7
FANCA-221ENST00000566889 SPINK5Q9NQ38 1064 aaPredicted RBP31.89■■■□□ 2.7
FANCA-221ENST00000566889 MYO5CQ9NQX4 1742 aa31.89■■■□□ 2.7
FANCA-221ENST00000566889 CHMP5Q9NZZ3 219 aa31.88■■■□□ 2.69
FANCA-221ENST00000566889 TRAK2O60296 914 aa31.86■■■□□ 2.69
FANCA-221ENST00000566889 PLA2R1Q13018 1463 aa31.86■■■□□ 2.69
FANCA-221ENST00000566889 CDCA8Q53HL2 280 aa31.85■■■□□ 2.69
FANCA-221ENST00000566889 PLB1Q6P1J6 1458 aa31.85■■■□□ 2.69
FANCA-221ENST00000566889 CENPJQ9HC77 1338 aaPredicted RBP31.85■■■□□ 2.69
FANCA-221ENST00000566889 MYH16Q9H6N6 1097 aa31.84■■■□□ 2.69
FANCA-221ENST00000566889 APAF1O14727 1248 aa31.84■■■□□ 2.69
FANCA-221ENST00000566889 ARXQ96QS3 562 aa31.84■■■□□ 2.69
FANCA-221ENST00000566889 CANXP27824 592 aaKnown RBP31.83■■■□□ 2.69
FANCA-221ENST00000566889 ESPNB1AK53 854 aa31.82■■■□□ 2.68
FANCA-221ENST00000566889 COG6Q9Y2V7 657 aa31.81■■■□□ 2.68
FANCA-221ENST00000566889 DDX11L8A8MPP1 907 aa31.81■■■□□ 2.68
FANCA-221ENST00000566889 CCDC146Q8IYE0 955 aa31.81■■■□□ 2.68
FANCA-221ENST00000566889 GZF1Q9H116 711 aaPredicted RBP31.81■■■□□ 2.68
FANCA-221ENST00000566889 UNC13BO14795 1591 aa31.81■■■□□ 2.68
FANCA-221ENST00000566889 GRPEL1Q9HAV7 217 aa31.8■■■□□ 2.68
FANCA-221ENST00000566889 PLEKHD1A6NEE1 506 aa31.77■■■□□ 2.68
FANCA-221ENST00000566889 PANK1Q8TE04 598 aa31.77■■■□□ 2.68
FANCA-221ENST00000566889 TPM2P07951 284 aa31.77■■■□□ 2.68
FANCA-221ENST00000566889 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
FANCA-221ENST00000566889 ATP10AO60312 1499 aa31.76■■■□□ 2.67
FANCA-221ENST00000566889 RSPH4AQ5TD94 716 aa31.73■■■□□ 2.67
FANCA-221ENST00000566889 PDZRN3Q9UPQ7 1066 aa31.73■■■□□ 2.67
FANCA-221ENST00000566889 IQGAP1P46940 1657 aa31.73■■■□□ 2.67
FANCA-221ENST00000566889 GRIN2AQ12879 1464 aa31.73■■■□□ 2.67
FANCA-221ENST00000566889 RWDD1Q9H446 243 aaPredicted RBP31.71■■■□□ 2.67
FANCA-221ENST00000566889 HNRNPMP52272 730 aaKnown RBP eCLIP31.71■■■□□ 2.67
FANCA-221ENST00000566889 TRIM44Q96DX7 344 aaPredicted RBP31.7■■■□□ 2.67
FANCA-221ENST00000566889 IQGAP3Q86VI3 1631 aa31.7■■■□□ 2.66
FANCA-221ENST00000566889 C22orf23Q9BZE7 217 aa31.68■■■□□ 2.66
FANCA-221ENST00000566889 RTEL1-TNFRSF6BF6WH68 1400 aa31.68■■■□□ 2.66
FANCA-221ENST00000566889 PCDHB15Q9Y5E8 787 aa31.67■■■□□ 2.66
FANCA-221ENST00000566889 DMRT2Q9Y5R5 561 aa31.67■■■□□ 2.66
FANCA-221ENST00000566889 ABCA8O94911 1581 aa31.66■■■□□ 2.66
FANCA-221ENST00000566889 SPRYD3Q8NCJ5 442 aa31.66■■■□□ 2.66
FANCA-221ENST00000566889 PDCL3Q9H2J4 239 aa31.65■■■□□ 2.66
FANCA-221ENST00000566889 MYOM1P52179 1685 aa31.65■■■□□ 2.66
FANCA-221ENST00000566889 ERBB4Q15303 1308 aa31.65■■■□□ 2.66
FANCA-221ENST00000566889 WWC1Q8IX03 1113 aa31.64■■■□□ 2.66
FANCA-221ENST00000566889 CARMIL2Q6F5E8 1435 aa31.63■■■□□ 2.65
FANCA-221ENST00000566889 SCAPERQ9BY12 1400 aa31.63■■■□□ 2.65
FANCA-221ENST00000566889 PTMSP20962 102 aa31.63■■■□□ 2.65
FANCA-221ENST00000566889 RARSP54136 660 aaKnown RBP31.63■■■□□ 2.65
FANCA-221ENST00000566889 HSCBQ8IWL3 235 aa31.63■■■□□ 2.65
FANCA-221ENST00000566889 MAST1Q9Y2H9 1570 aa31.62■■■□□ 2.65
FANCA-221ENST00000566889 NCOA3Q9Y6Q9 1424 aa31.62■■■□□ 2.65
FANCA-221ENST00000566889 ZNF692Q9BU19 519 aaPredicted RBP31.61■■■□□ 2.65
FANCA-221ENST00000566889 SCAF11Q99590 1463 aaKnown RBP31.61■■■□□ 2.65
FANCA-221ENST00000566889 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
FANCA-221ENST00000566889 MADDQ8WXG6 1647 aa31.6■■■□□ 2.65
FANCA-221ENST00000566889 SKOR2Q2VWA4 1001 aaPredicted RBP31.6■■■□□ 2.65
FANCA-221ENST00000566889 SAMD9LQ8IVG5 1584 aa31.59■■■□□ 2.65
FANCA-221ENST00000566889 ATP10BO94823 1461 aa31.58■■■□□ 2.65
FANCA-221ENST00000566889 DDIT3P35638 169 aa31.57■■■□□ 2.65
FANCA-221ENST00000566889 CIZ1Q9ULV3 898 aaPredicted RBP31.57■■■□□ 2.65
FANCA-221ENST00000566889 STAC3Q96MF2 364 aa31.56■■■□□ 2.64
FANCA-221ENST00000566889 POLR3AO14802 1390 aaPredicted RBP31.55■■■□□ 2.64
FANCA-221ENST00000566889 MRC2Q9UBG0 1479 aa31.54■■■□□ 2.64
FANCA-221ENST00000566889 KDM5AP29375 1690 aaKnown RBP31.54■■■□□ 2.64
FANCA-221ENST00000566889 GBP4Q96PP9 640 aa31.54■■■□□ 2.64
FANCA-221ENST00000566889 RLBP1P12271 317 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms