RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 PLA2R1Q13018 1463 aa16.18■□□□□ 0.18
CDH11-212ENST00000566827 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
CDH11-212ENST00000566827 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
CDH11-212ENST00000566827 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
CDH11-212ENST00000566827 UBR1Q8IWV7 1749 aa16.17■□□□□ 0.18
CDH11-212ENST00000566827 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
CDH11-212ENST00000566827 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
CDH11-212ENST00000566827 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
CDH11-212ENST00000566827 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
CDH11-212ENST00000566827 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 CLTCL1P53675 1640 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 HRCP23327 699 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
CDH11-212ENST00000566827 RGL3Q3MIN7 710 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
CDH11-212ENST00000566827 THEMISQ8N1K5 641 aaPredicted RBP16.11■□□□□ 0.17
CDH11-212ENST00000566827 MYT1Q01538 1121 aa16.09■□□□□ 0.17
CDH11-212ENST00000566827 RPRD2Q5VT52 1461 aaKnown RBP16.09■□□□□ 0.17
CDH11-212ENST00000566827 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
CDH11-212ENST00000566827 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
CDH11-212ENST00000566827 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
CDH11-212ENST00000566827 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
CDH11-212ENST00000566827 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
CDH11-212ENST00000566827 PTPRTO14522 1441 aa16.05■□□□□ 0.16
CDH11-212ENST00000566827 SLC52A1Q9NWF4 448 aa16.05■□□□□ 0.16
CDH11-212ENST00000566827 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
CDH11-212ENST00000566827 TRPM2O94759 1503 aa16.02■□□□□ 0.16
CDH11-212ENST00000566827 SCAF11Q99590 1463 aaKnown RBP16.02■□□□□ 0.15
CDH11-212ENST00000566827 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
CDH11-212ENST00000566827 NPHP4O75161 1426 aaPredicted RBP16.01■□□□□ 0.15
CDH11-212ENST00000566827 PPP1R15AO75807 674 aaPredicted RBP16.01■□□□□ 0.15
CDH11-212ENST00000566827 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
CDH11-212ENST00000566827 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
CDH11-212ENST00000566827 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
CDH11-212ENST00000566827 ZFYVE9O95405 1425 aa16■□□□□ 0.15
CDH11-212ENST00000566827 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
CDH11-212ENST00000566827 SLIT1O75093 1534 aa15.99■□□□□ 0.15
CDH11-212ENST00000566827 EID1Q9Y6B2 187 aa15.98■□□□□ 0.15
CDH11-212ENST00000566827 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
CDH11-212ENST00000566827 KIF1BO60333 1816 aa15.97■□□□□ 0.15
CDH11-212ENST00000566827 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
CDH11-212ENST00000566827 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
CDH11-212ENST00000566827 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
CDH11-212ENST00000566827 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
CDH11-212ENST00000566827 NEXMIFQ5QGS0 1516 aa15.93■□□□□ 0.14
CDH11-212ENST00000566827 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
CDH11-212ENST00000566827 MED14O60244 1454 aa15.93■□□□□ 0.14
CDH11-212ENST00000566827 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
CDH11-212ENST00000566827 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
CDH11-212ENST00000566827 CERKQ8TCT0 537 aa15.91■□□□□ 0.14
CDH11-212ENST00000566827 NRXN3Q9Y4C0 1643 aa15.91■□□□□ 0.14
CDH11-212ENST00000566827 ADAMTS13Q76LX8 1427 aa15.91■□□□□ 0.14
CDH11-212ENST00000566827 TMEM132EQ6IEE7 984 aa15.91■□□□□ 0.14
CDH11-212ENST00000566827 METP08581 1390 aa15.9■□□□□ 0.14
CDH11-212ENST00000566827 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
CDH11-212ENST00000566827 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
CDH11-212ENST00000566827 KCNA6P17658 529 aa15.89■□□□□ 0.13
CDH11-212ENST00000566827 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
CDH11-212ENST00000566827 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
CDH11-212ENST00000566827 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
CDH11-212ENST00000566827 PPLO60437 1756 aa15.88■□□□□ 0.13
CDH11-212ENST00000566827 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
CDH11-212ENST00000566827 PLEKHG1Q9ULL1 1385 aa15.86■□□□□ 0.13
CDH11-212ENST00000566827 STK26Q9P289 416 aa15.86■□□□□ 0.13
CDH11-212ENST00000566827 CFAP44Q96MT7 982 aa15.85■□□□□ 0.13
CDH11-212ENST00000566827 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
CDH11-212ENST00000566827 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
CDH11-212ENST00000566827 XIRP1Q702N8 1843 aaKnown RBP15.84■□□□□ 0.13
CDH11-212ENST00000566827 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
CDH11-212ENST00000566827 AMOTL2Q9Y2J4 779 aa15.83■□□□□ 0.12
CDH11-212ENST00000566827 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
CDH11-212ENST00000566827 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
CDH11-212ENST00000566827 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDH11-212ENST00000566827 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
CDH11-212ENST00000566827 SAFB2Q14151 953 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDH11-212ENST00000566827 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
CDH11-212ENST00000566827 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
CDH11-212ENST00000566827 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
CDH11-212ENST00000566827 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
CDH11-212ENST00000566827 CHD2O14647 1828 aaKnown RBP15.8■□□□□ 0.12
CDH11-212ENST00000566827 ALKQ9UM73 1620 aa15.8■□□□□ 0.12
CDH11-212ENST00000566827 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
CDH11-212ENST00000566827 SETD1AO15047 1707 aaKnown RBP15.79■□□□□ 0.12
CDH11-212ENST00000566827 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
CDH11-212ENST00000566827 WAPLQ7Z5K2 1190 aa15.78■□□□□ 0.12
CDH11-212ENST00000566827 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
CDH11-212ENST00000566827 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
CDH11-212ENST00000566827 NBR1Q14596 966 aa15.78■□□□□ 0.12
CDH11-212ENST00000566827 SETBP1Q9Y6X0 1596 aa15.78■□□□□ 0.12
CDH11-212ENST00000566827 NBPF1Q3BBV0 1214 aa15.77■□□□□ 0.12
CDH11-212ENST00000566827 NUTM2FA1L443 756 aa15.77■□□□□ 0.11
CDH11-212ENST00000566827 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
CDH11-212ENST00000566827 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
CDH11-212ENST00000566827 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
CDH11-212ENST00000566827 PLEKHH1Q9ULM0 1364 aa15.76■□□□□ 0.11
CDH11-212ENST00000566827 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
CDH11-212ENST00000566827 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
CDH11-212ENST00000566827 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms