RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 DUOX2Q9NRD8 1548 aa26.88■■□□□ 1.89
CLK3-217ENST00000566126 NUTM2BA6NNL0 878 aaPredicted RBP26.85■■□□□ 1.89
CLK3-217ENST00000566126 NUTM2EB1AL46 878 aaPredicted RBP26.85■■□□□ 1.89
CLK3-217ENST00000566126 NUTM2AQ8IVF1 878 aaPredicted RBP26.85■■□□□ 1.89
CLK3-217ENST00000566126 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.83■■□□□ 1.89
CLK3-217ENST00000566126 ADGRB3O60242 1522 aa26.83■■□□□ 1.89
CLK3-217ENST00000566126 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
CLK3-217ENST00000566126 BCANQ96GW7 911 aa26.81■■□□□ 1.88
CLK3-217ENST00000566126 SETBP1Q9Y6X0 1596 aa26.8■■□□□ 1.88
CLK3-217ENST00000566126 RBM6P78332 1123 aaKnown RBP26.78■■□□□ 1.88
CLK3-217ENST00000566126 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
CLK3-217ENST00000566126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.883e-9■■■■■ 27.4
CLK3-217ENST00000566126 CADPS2Q86UW7 1296 aa26.76■■□□□ 1.87
CLK3-217ENST00000566126 QTRT2Q9H974 415 aaKnown RBP26.76■■□□□ 1.87
CLK3-217ENST00000566126 ERBINQ96RT1 1412 aa26.75■■□□□ 1.87
CLK3-217ENST00000566126 ZRANB1Q9UGI0 708 aa26.75■■□□□ 1.87
CLK3-217ENST00000566126 NOS1P29475 1434 aa26.74■■□□□ 1.87
CLK3-217ENST00000566126 PLEKHG1Q9ULL1 1385 aa26.74■■□□□ 1.87
CLK3-217ENST00000566126 BRINP3Q76B58 766 aa26.74■■□□□ 1.87
CLK3-217ENST00000566126 C14orf37Q86TY3 774 aa26.74■■□□□ 1.87
CLK3-217ENST00000566126 ZFYVE9O95405 1425 aa26.73■■□□□ 1.87
CLK3-217ENST00000566126 KIF15Q9NS87 1388 aa26.73■■□□□ 1.87
CLK3-217ENST00000566126 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
CLK3-217ENST00000566126 LMTK2Q8IWU2 1503 aa26.73■■□□□ 1.87
CLK3-217ENST00000566126 MYO5BQ9ULV0 1848 aa26.72■■□□□ 1.87
CLK3-217ENST00000566126 ATF3P18847 181 aa26.71■■□□□ 1.87
CLK3-217ENST00000566126 SETD5Q9C0A6 1442 aa26.71■■□□□ 1.87
CLK3-217ENST00000566126 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
CLK3-217ENST00000566126 C8orf37Q96NL8 207 aa26.7■■□□□ 1.86
CLK3-217ENST00000566126 KANK1Q14678 1352 aa26.69■■□□□ 1.86
CLK3-217ENST00000566126 EP400Q96L91 3159 aa26.68■■□□□ 1.86
CLK3-217ENST00000566126 TBX22Q9Y458 520 aa26.68■■□□□ 1.86
CLK3-217ENST00000566126 ASXL1Q8IXJ9 1541 aa26.66■■□□□ 1.86
CLK3-217ENST00000566126 NHSL1Q5SYE7 1610 aa26.66■■□□□ 1.86
CLK3-217ENST00000566126 RRP7BPQ9NSQ0 103 aa26.66■■□□□ 1.86
CLK3-217ENST00000566126 SLC52A1Q9NWF4 448 aa26.66■■□□□ 1.86
CLK3-217ENST00000566126 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
CLK3-217ENST00000566126 FOXD1Q16676 465 aa26.65■■□□□ 1.86
CLK3-217ENST00000566126 RIMS2Q9UQ26 1411 aa26.65■■□□□ 1.86
CLK3-217ENST00000566126 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
CLK3-217ENST00000566126 GCC2Q8IWJ2 1684 aa26.62■■□□□ 1.85
CLK3-217ENST00000566126 ADAMTS13Q76LX8 1427 aa26.62■■□□□ 1.85
CLK3-217ENST00000566126 PPP1R15AO75807 674 aaPredicted RBP26.61■■□□□ 1.85
CLK3-217ENST00000566126 NGLY1Q96IV0 654 aa26.61■■□□□ 1.85
CLK3-217ENST00000566126 PNPLA6Q8IY17 1366 aa26.59■■□□□ 1.85
CLK3-217ENST00000566126 LRRC59Q96AG4 307 aaKnown RBP26.59■■□□□ 1.85
CLK3-217ENST00000566126 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
CLK3-217ENST00000566126 ABCC5O15440 1437 aa26.57■■□□□ 1.84
CLK3-217ENST00000566126 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
CLK3-217ENST00000566126 DCCP43146 1447 aa26.56■■□□□ 1.84
CLK3-217ENST00000566126 HDGFP51858 240 aaKnown RBP26.55■■□□□ 1.84
CLK3-217ENST00000566126 MST1RQ04912 1400 aa26.55■■□□□ 1.84
CLK3-217ENST00000566126 DDX17Q92841 729 aaKnown RBP26.53■■□□□ 1.84
CLK3-217ENST00000566126 PTPRUQ92729 1446 aa26.53■■□□□ 1.84
CLK3-217ENST00000566126 ADAMTS2O95450 1211 aa26.51■■□□□ 1.83
CLK3-217ENST00000566126 AMOTL2Q9Y2J4 779 aa26.5■■□□□ 1.83
CLK3-217ENST00000566126 CCDC125Q86Z20 511 aa26.49■■□□□ 1.83
CLK3-217ENST00000566126 USP21Q9UK80 565 aa26.48■■□□□ 1.83
CLK3-217ENST00000566126 TRPC5Q9UL62 973 aaPredicted RBP26.48■■□□□ 1.83
CLK3-217ENST00000566126 TRPM2O94759 1503 aa26.48■■□□□ 1.83
CLK3-217ENST00000566126 RPRD2Q5VT52 1461 aaKnown RBP26.48■■□□□ 1.83
CLK3-217ENST00000566126 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.47■■□□□ 1.83
CLK3-217ENST00000566126 ATRNO75882 1429 aa26.46■■□□□ 1.83
CLK3-217ENST00000566126 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
CLK3-217ENST00000566126 DAPK1P53355 1430 aa26.45■■□□□ 1.82
CLK3-217ENST00000566126 LRP5O75197 1615 aa26.44■■□□□ 1.82
CLK3-217ENST00000566126 XRN1Q8IZH2 1706 aaKnown RBP26.43■■□□□ 1.82
CLK3-217ENST00000566126 FNBP4Q8N3X1 1017 aaPredicted RBP26.42■■□□□ 1.82
CLK3-217ENST00000566126 PTPN23Q9H3S7 1636 aa26.41■■□□□ 1.82
CLK3-217ENST00000566126 UNC13BO14795 1591 aa26.4■■□□□ 1.82
CLK3-217ENST00000566126 ANKRD30AQ9BXX3 1397 aa26.38■■□□□ 1.81
CLK3-217ENST00000566126 CHGAP10645 457 aaKnown RBP26.38■■□□□ 1.81
CLK3-217ENST00000566126 LAMC1P11047 1609 aa26.37■■□□□ 1.81
CLK3-217ENST00000566126 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
CLK3-217ENST00000566126 PTCH1Q13635 1447 aa26.36■■□□□ 1.81
CLK3-217ENST00000566126 NRXN3Q9Y4C0 1643 aa26.35■■□□□ 1.81
CLK3-217ENST00000566126 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
CLK3-217ENST00000566126 ADGRL3Q9HAR2 1447 aa26.32■■□□□ 1.8
CLK3-217ENST00000566126 BLMP54132 1417 aaPredicted RBP26.31■■□□□ 1.8
CLK3-217ENST00000566126 BCL9LQ86UU0 1499 aa26.31■■□□□ 1.8
CLK3-217ENST00000566126 SOS2Q07890 1332 aaPredicted RBP26.31■■□□□ 1.8
CLK3-217ENST00000566126 DEFB132Q7Z7B7 95 aa26.3■■□□□ 1.8
CLK3-217ENST00000566126 VPS8Q8N3P4 1428 aa26.3■■□□□ 1.8
CLK3-217ENST00000566126 C1orf167Q5SNV9 1468 aa26.3■■□□□ 1.8
CLK3-217ENST00000566126 COL22A1Q8NFW1 1626 aaPredicted RBP26.29■■□□□ 1.8
CLK3-217ENST00000566126 MARF1Q9Y4F3 1742 aaKnown RBP26.25■■□□□ 1.79
CLK3-217ENST00000566126 E9PCH4 1651 aa26.25■■□□□ 1.79
CLK3-217ENST00000566126 METP08581 1390 aa26.25■■□□□ 1.79
CLK3-217ENST00000566126 GJD4Q96KN9 370 aaPredicted RBP26.25■■□□□ 1.79
CLK3-217ENST00000566126 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
CLK3-217ENST00000566126 MYOM2P54296 1465 aa26.23■■□□□ 1.79
CLK3-217ENST00000566126 BRWD3Q6RI45 1802 aa26.23■■□□□ 1.79
CLK3-217ENST00000566126 ORAI2Q96SN7 254 aa26.21■■□□□ 1.79
CLK3-217ENST00000566126 ANKRD50Q9ULJ7 1429 aa26.21■■□□□ 1.79
CLK3-217ENST00000566126 GLI3P10071 1580 aa26.2■■□□□ 1.79
CLK3-217ENST00000566126 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.19■■□□□ 1.78
CLK3-217ENST00000566126 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
CLK3-217ENST00000566126 PSDA5PKW4 1024 aaPredicted RBP26.16■■□□□ 1.78
CLK3-217ENST00000566126 HRCP23327 699 aa26.16■■□□□ 1.78
CLK3-217ENST00000566126 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms