RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
CAPN3-215ENST00000565559 EHBP1L1Q8N3D4 1523 aa17.97■□□□□ 0.47
CAPN3-215ENST00000565559 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
CAPN3-215ENST00000565559 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
CAPN3-215ENST00000565559 TMEM2Q9UHN6 1383 aa17.95■□□□□ 0.46
CAPN3-215ENST00000565559 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
CAPN3-215ENST00000565559 PRDM15P57071 1507 aaPredicted RBP17.94■□□□□ 0.46
CAPN3-215ENST00000565559 FGD6Q6ZV73 1430 aa17.94■□□□□ 0.46
CAPN3-215ENST00000565559 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
CAPN3-215ENST00000565559 LRP6O75581 1613 aa17.93■□□□□ 0.46
CAPN3-215ENST00000565559 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
CAPN3-215ENST00000565559 SRCAPQ6ZRS2 3230 aa17.92■□□□□ 0.46
CAPN3-215ENST00000565559 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
CAPN3-215ENST00000565559 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
CAPN3-215ENST00000565559 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
CAPN3-215ENST00000565559 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
CAPN3-215ENST00000565559 BCANQ96GW7 911 aa17.88■□□□□ 0.45
CAPN3-215ENST00000565559 ARHGAP31Q2M1Z3 1444 aa17.88■□□□□ 0.45
CAPN3-215ENST00000565559 POLA2Q14181 598 aa17.86■□□□□ 0.45
CAPN3-215ENST00000565559 EFCAB6Q5THR3 1501 aa17.86■□□□□ 0.45
CAPN3-215ENST00000565559 CEP152O94986 1710 aa17.85■□□□□ 0.45
CAPN3-215ENST00000565559 NWD1Q149M9 1564 aa17.85■□□□□ 0.45
CAPN3-215ENST00000565559 PIK3C2BO00750 1634 aa17.84■□□□□ 0.45
CAPN3-215ENST00000565559 MROH1Q8NDA8 1641 aa17.84■□□□□ 0.45
CAPN3-215ENST00000565559 TET3O43151 1660 aa17.83■□□□□ 0.45
CAPN3-215ENST00000565559 CFAP65Q6ZU64 1925 aaKnown RBP17.83■□□□□ 0.44
CAPN3-215ENST00000565559 C14orf37Q86TY3 774 aa17.83■□□□□ 0.44
CAPN3-215ENST00000565559 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-215ENST00000565559 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-215ENST00000565559 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-215ENST00000565559 AFF2P51816 1311 aa17.81■□□□□ 0.44
CAPN3-215ENST00000565559 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
CAPN3-215ENST00000565559 ZRANB1Q9UGI0 708 aa17.81■□□□□ 0.44
CAPN3-215ENST00000565559 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
CAPN3-215ENST00000565559 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
CAPN3-215ENST00000565559 CADPS2Q86UW7 1296 aa17.79■□□□□ 0.44
CAPN3-215ENST00000565559 KDM5AP29375 1690 aaKnown RBP17.79■□□□□ 0.44
CAPN3-215ENST00000565559 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
CAPN3-215ENST00000565559 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
CAPN3-215ENST00000565559 DUOX2Q9NRD8 1548 aa17.78■□□□□ 0.44
CAPN3-215ENST00000565559 ATF3P18847 181 aa17.78■□□□□ 0.44
CAPN3-215ENST00000565559 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
CAPN3-215ENST00000565559 IDI1Q13907 227 aa17.78■□□□□ 0.44
CAPN3-215ENST00000565559 RGS12O14924 1447 aa17.78■□□□□ 0.44
CAPN3-215ENST00000565559 KANK1Q14678 1352 aa17.77■□□□□ 0.43
CAPN3-215ENST00000565559 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
CAPN3-215ENST00000565559 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
CAPN3-215ENST00000565559 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-215ENST00000565559 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
CAPN3-215ENST00000565559 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
CAPN3-215ENST00000565559 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
CAPN3-215ENST00000565559 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
CAPN3-215ENST00000565559 ADGRB3O60242 1522 aa17.72■□□□□ 0.43
CAPN3-215ENST00000565559 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
CAPN3-215ENST00000565559 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
CAPN3-215ENST00000565559 PLEKHG1Q9ULL1 1385 aa17.71■□□□□ 0.43
CAPN3-215ENST00000565559 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
CAPN3-215ENST00000565559 BRINP3Q76B58 766 aa17.69■□□□□ 0.42
CAPN3-215ENST00000565559 DIP2AQ14689 1571 aa17.69■□□□□ 0.42
CAPN3-215ENST00000565559 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
CAPN3-215ENST00000565559 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
CAPN3-215ENST00000565559 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
CAPN3-215ENST00000565559 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
CAPN3-215ENST00000565559 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
CAPN3-215ENST00000565559 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
CAPN3-215ENST00000565559 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
CAPN3-215ENST00000565559 SETBP1Q9Y6X0 1596 aa17.65■□□□□ 0.42
CAPN3-215ENST00000565559 NOS1P29475 1434 aa17.64■□□□□ 0.42
CAPN3-215ENST00000565559 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
CAPN3-215ENST00000565559 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
CAPN3-215ENST00000565559 ZFYVE9O95405 1425 aa17.64■□□□□ 0.41
CAPN3-215ENST00000565559 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
CAPN3-215ENST00000565559 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
CAPN3-215ENST00000565559 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.62■□□□□ 0.41
CAPN3-215ENST00000565559 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
CAPN3-215ENST00000565559 DCCP43146 1447 aa17.61■□□□□ 0.41
CAPN3-215ENST00000565559 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
CAPN3-215ENST00000565559 PNPLA6Q8IY17 1366 aa17.59■□□□□ 0.41
CAPN3-215ENST00000565559 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
CAPN3-215ENST00000565559 USP21Q9UK80 565 aa17.58■□□□□ 0.4
CAPN3-215ENST00000565559 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
CAPN3-215ENST00000565559 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
CAPN3-215ENST00000565559 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
CAPN3-215ENST00000565559 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
CAPN3-215ENST00000565559 ABCC5O15440 1437 aa17.54■□□□□ 0.4
CAPN3-215ENST00000565559 MST1RQ04912 1400 aa17.54■□□□□ 0.4
CAPN3-215ENST00000565559 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
CAPN3-215ENST00000565559 TRPM2O94759 1503 aa17.52■□□□□ 0.4
CAPN3-215ENST00000565559 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.39
CAPN3-215ENST00000565559 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
CAPN3-215ENST00000565559 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
CAPN3-215ENST00000565559 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
CAPN3-215ENST00000565559 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
CAPN3-215ENST00000565559 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
CAPN3-215ENST00000565559 ATRNO75882 1429 aa17.48■□□□□ 0.39
CAPN3-215ENST00000565559 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
CAPN3-215ENST00000565559 DAPK1P53355 1430 aa17.47■□□□□ 0.39
CAPN3-215ENST00000565559 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CAPN3-215ENST00000565559 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
CAPN3-215ENST00000565559 EP400Q96L91 3159 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms