RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IDI1Q13907 227 aa27.27■■□□□ 1.96
CLN6-205ENST00000564846 KIAA1210Q9ULL0 1709 aa27.26■■□□□ 1.95
CLN6-205ENST00000564846 ESF1Q9H501 851 aaKnown RBP27.26■■□□□ 1.95
CLN6-205ENST00000564846 FBXO31Q5XUX0 539 aaPredicted RBP27.24■■□□□ 1.95
CLN6-205ENST00000564846 ADGRF5Q8IZF2 1346 aa27.23■■□□□ 1.95
CLN6-205ENST00000564846 PPLO60437 1756 aa27.22■■□□□ 1.95
CLN6-205ENST00000564846 SPATA31D1Q6ZQQ2 1576 aa27.21■■□□□ 1.95
CLN6-205ENST00000564846 ANP32CO43423 234 aa27.2■■□□□ 1.95
CLN6-205ENST00000564846 ZMYM3Q14202 1370 aa27.18■■□□□ 1.94
CLN6-205ENST00000564846 SCAF11Q99590 1463 aaKnown RBP27.18■■□□□ 1.94
CLN6-205ENST00000564846 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
CLN6-205ENST00000564846 TMEM131LA2VDJ0 1609 aa27.16■■□□□ 1.94
CLN6-205ENST00000564846 IQGAP1P46940 1657 aa27.16■■□□□ 1.94
CLN6-205ENST00000564846 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
CLN6-205ENST00000564846 VGFO15240 615 aaPredicted RBP27.15■■□□□ 1.94
CLN6-205ENST00000564846 CFAP70Q5T0N1 1121 aa27.15■■□□□ 1.94
CLN6-205ENST00000564846 ZFYVE9O95405 1425 aa27.13■■□□□ 1.93
CLN6-205ENST00000564846 TESK2Q96S53 571 aa27.12■■□□□ 1.93
CLN6-205ENST00000564846 EIF3AQ14152 1382 aaKnown RBP27.11■■□□□ 1.93
CLN6-205ENST00000564846 SETBP1Q9Y6X0 1596 aa27.11■■□□□ 1.93
CLN6-205ENST00000564846 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
CLN6-205ENST00000564846 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
CLN6-205ENST00000564846 CCER2I3L3R5 266 aa27.07■■□□□ 1.92
CLN6-205ENST00000564846 POLR3GLQ9BT43 218 aa27.07■■□□□ 1.92
CLN6-205ENST00000564846 TMF1P82094 1093 aa27.06■■□□□ 1.92
CLN6-205ENST00000564846 MYO5BQ9ULV0 1848 aa27.04■■□□□ 1.92
CLN6-205ENST00000564846 SLC24A1O60721 1099 aa27.03■■□□□ 1.92
CLN6-205ENST00000564846 TNRQ92752 1358 aa27.02■■□□□ 1.92
CLN6-205ENST00000564846 A2ML1A8K2U0 1454 aa27.02■■□□□ 1.92
CLN6-205ENST00000564846 ADGRB1O14514 1584 aa27.01■■□□□ 1.91
CLN6-205ENST00000564846 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
CLN6-205ENST00000564846 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
CLN6-205ENST00000564846 YTHDC1Q96MU7 727 aaKnown RBP26.98■■□□□ 1.91
CLN6-205ENST00000564846 CENPBP07199 599 aaPredicted RBP26.97■■□□□ 1.91
CLN6-205ENST00000564846 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
CLN6-205ENST00000564846 MYO3AQ8NEV4 1616 aa26.95■■□□□ 1.9
CLN6-205ENST00000564846 PRKRIP1Q9H875 184 aaPredicted RBP26.94■■□□□ 1.9
CLN6-205ENST00000564846 RIMS2Q9UQ26 1411 aa26.94■■□□□ 1.9
CLN6-205ENST00000564846 KDM5AP29375 1690 aaKnown RBP26.93■■□□□ 1.9
CLN6-205ENST00000564846 FER1L4A9Z1Z3 1794 aa26.93■■□□□ 1.9
CLN6-205ENST00000564846 SBNO2Q9Y2G9 1366 aa26.93■■□□□ 1.9
CLN6-205ENST00000564846 TMEM132EQ6IEE7 984 aa26.92■■□□□ 1.9
CLN6-205ENST00000564846 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
CLN6-205ENST00000564846 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.9■■□□□ 1.9
CLN6-205ENST00000564846 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
CLN6-205ENST00000564846 TRAK1Q9UPV9 953 aa26.89■■□□□ 1.9
CLN6-205ENST00000564846 C3P01024 1663 aa26.89■■□□□ 1.9
CLN6-205ENST00000564846 HDGFP51858 240 aaKnown RBP26.88■■□□□ 1.89
CLN6-205ENST00000564846 CEBPAP49715 358 aaPredicted RBP26.86■■□□□ 1.89
CLN6-205ENST00000564846 ALKQ9UM73 1620 aa26.84■■□□□ 1.89
CLN6-205ENST00000564846 ASXL1Q8IXJ9 1541 aa26.84■■□□□ 1.89
CLN6-205ENST00000564846 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
CLN6-205ENST00000564846 TMEM2Q9UHN6 1383 aa26.82■■□□□ 1.88
CLN6-205ENST00000564846 KTN1Q86UP2 1357 aaKnown RBP26.8■■□□□ 1.88
CLN6-205ENST00000564846 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
CLN6-205ENST00000564846 QRICH2Q9H0J4 1663 aa26.79■■□□□ 1.88
CLN6-205ENST00000564846 PER1O15534 1290 aaPredicted RBP26.78■■□□□ 1.88
CLN6-205ENST00000564846 PANK3Q9H999 370 aa26.78■■□□□ 1.88
CLN6-205ENST00000564846 YTHDC2Q9H6S0 1430 aaKnown RBP26.77■■□□□ 1.88
CLN6-205ENST00000564846 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
CLN6-205ENST00000564846 RALBP1Q15311 655 aa26.74■■□□□ 1.87
CLN6-205ENST00000564846 PTPRMP28827 1452 aa26.73■■□□□ 1.87
CLN6-205ENST00000564846 STK26Q9P289 416 aa26.73■■□□□ 1.87
CLN6-205ENST00000564846 ADAMTSL3P82987 1691 aa26.72■■□□□ 1.87
CLN6-205ENST00000564846 NRXN3Q9Y4C0 1643 aa26.72■■□□□ 1.87
CLN6-205ENST00000564846 RIMS1Q86UR5 1692 aaKnown RBP26.72■■□□□ 1.87
CLN6-205ENST00000564846 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
CLN6-205ENST00000564846 PUS7Q96PZ0 661 aaKnown RBP26.71■■□□□ 1.87
CLN6-205ENST00000564846 SETD1AO15047 1707 aaKnown RBP26.71■■□□□ 1.87
CLN6-205ENST00000564846 MYOM1P52179 1685 aa26.7■■□□□ 1.86
CLN6-205ENST00000564846 LRPPRCP42704 1394 aaKnown RBP26.7■■□□□ 1.86
CLN6-205ENST00000564846 EVC2Q86UK5 1308 aa26.69■■□□□ 1.86
CLN6-205ENST00000564846 MRS2Q9HD23 443 aa26.69■■□□□ 1.86
CLN6-205ENST00000564846 SLIT1O75093 1534 aa26.68■■□□□ 1.86
CLN6-205ENST00000564846 DLC1Q96QB1 1528 aa26.68■■□□□ 1.86
CLN6-205ENST00000564846 THEMISQ8N1K5 641 aaPredicted RBP26.68■■□□□ 1.86
CLN6-205ENST00000564846 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
CLN6-205ENST00000564846 EID1Q9Y6B2 187 aa26.67■■□□□ 1.86
CLN6-205ENST00000564846 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
CLN6-205ENST00000564846 ABCC11Q96J66 1382 aa26.66■■□□□ 1.86
CLN6-205ENST00000564846 PLEKHG1Q9ULL1 1385 aa26.66■■□□□ 1.86
CLN6-205ENST00000564846 CCDC184Q52MB2 194 aa26.66■■□□□ 1.86
CLN6-205ENST00000564846 PRAM1Q96QH2 718 aa26.66■■□□□ 1.86
CLN6-205ENST00000564846 PARD3Q8TEW0 1356 aa26.66■■□□□ 1.86
CLN6-205ENST00000564846 POGKQ9P215 609 aa26.65■■□□□ 1.86
CLN6-205ENST00000564846 KNSTRNQ9Y448 316 aa26.65■■□□□ 1.86
CLN6-205ENST00000564846 MYBBP1AQ9BQG0 1328 aaKnown RBP26.65■■□□□ 1.86
CLN6-205ENST00000564846 TXNDC2Q86VQ3 553 aa26.64■■□□□ 1.86
CLN6-205ENST00000564846 LTKP29376 864 aa26.63■■□□□ 1.85
CLN6-205ENST00000564846 BCANQ96GW7 911 aa26.63■■□□□ 1.85
CLN6-205ENST00000564846 TULP4Q9NRJ4 1543 aa26.63■■□□□ 1.85
CLN6-205ENST00000564846 METP08581 1390 aa26.62■■□□□ 1.85
CLN6-205ENST00000564846 ADAMTS13Q76LX8 1427 aa26.6■■□□□ 1.85
CLN6-205ENST00000564846 SAFB2Q14151 953 aaKnown RBP eCLIP26.6■■□□□ 1.85
CLN6-205ENST00000564846 CEP170BQ9Y4F5 1589 aaPredicted RBP26.6■■□□□ 1.85
CLN6-205ENST00000564846 SIRT1Q96EB6 747 aa26.58■■□□□ 1.85
CLN6-205ENST00000564846 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.85
CLN6-205ENST00000564846 BRD4O60885 1362 aaPredicted RBP26.58■■□□□ 1.84
CLN6-205ENST00000564846 TECPR2O15040 1411 aa26.58■■□□□ 1.84
CLN6-205ENST00000564846 AMER1Q5JTC6 1135 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms