RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
GTF3C1-205ENST00000564747 PTPRTO14522 1441 aa20.37■□□□□ 0.85
GTF3C1-205ENST00000564747 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
GTF3C1-205ENST00000564747 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
GTF3C1-205ENST00000564747 CLTCL1P53675 1640 aa20.36■□□□□ 0.85
GTF3C1-205ENST00000564747 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
GTF3C1-205ENST00000564747 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
GTF3C1-205ENST00000564747 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
GTF3C1-205ENST00000564747 ZFYVE16Q7Z3T8 1539 aa20.34■□□□□ 0.85
GTF3C1-205ENST00000564747 ZNF521Q96K83 1311 aa20.34■□□□□ 0.85
GTF3C1-205ENST00000564747 CEP152O94986 1710 aa20.34■□□□□ 0.85
GTF3C1-205ENST00000564747 GOLGA2Q08379 1002 aa20.34■□□□□ 0.85
GTF3C1-205ENST00000564747 SYNMO15061 1565 aa20.33■□□□□ 0.85
GTF3C1-205ENST00000564747 ASXL1Q8IXJ9 1541 aa20.33■□□□□ 0.84
GTF3C1-205ENST00000564747 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.84
GTF3C1-205ENST00000564747 KIF3BO15066 747 aa20.32■□□□□ 0.84
GTF3C1-205ENST00000564747 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
GTF3C1-205ENST00000564747 CFAP70Q5T0N1 1121 aa20.31■□□□□ 0.84
GTF3C1-205ENST00000564747 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
GTF3C1-205ENST00000564747 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
GTF3C1-205ENST00000564747 EIF3AQ14152 1382 aaKnown RBP20.29■□□□□ 0.84
GTF3C1-205ENST00000564747 KANK1Q14678 1352 aa20.29■□□□□ 0.84
GTF3C1-205ENST00000564747 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
GTF3C1-205ENST00000564747 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
GTF3C1-205ENST00000564747 MYOM1P52179 1685 aa20.28■□□□□ 0.84
GTF3C1-205ENST00000564747 TET3O43151 1660 aa20.27■□□□□ 0.84
GTF3C1-205ENST00000564747 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.84
GTF3C1-205ENST00000564747 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
GTF3C1-205ENST00000564747 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.83
GTF3C1-205ENST00000564747 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.83
GTF3C1-205ENST00000564747 APAF1O14727 1248 aa20.26■□□□□ 0.83
GTF3C1-205ENST00000564747 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
GTF3C1-205ENST00000564747 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
GTF3C1-205ENST00000564747 ATP7AQ04656 1500 aa20.25■□□□□ 0.83
GTF3C1-205ENST00000564747 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
GTF3C1-205ENST00000564747 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
GTF3C1-205ENST00000564747 FANCAO15360 1455 aa20.24■□□□□ 0.83
GTF3C1-205ENST00000564747 TRMT2AQ8IZ69 625 aaKnown RBP20.24■□□□□ 0.83
GTF3C1-205ENST00000564747 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
GTF3C1-205ENST00000564747 VWDEQ8N2E2 1590 aa20.23■□□□□ 0.83
GTF3C1-205ENST00000564747 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
GTF3C1-205ENST00000564747 KDM5AP29375 1690 aaKnown RBP20.22■□□□□ 0.83
GTF3C1-205ENST00000564747 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
GTF3C1-205ENST00000564747 INO80Q9ULG1 1556 aaPredicted RBP20.2■□□□□ 0.82
GTF3C1-205ENST00000564747 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
GTF3C1-205ENST00000564747 BCAR3O75815 825 aa20.19■□□□□ 0.82
GTF3C1-205ENST00000564747 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
GTF3C1-205ENST00000564747 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
GTF3C1-205ENST00000564747 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
GTF3C1-205ENST00000564747 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
GTF3C1-205ENST00000564747 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
GTF3C1-205ENST00000564747 NEFMP07197 916 aa20.17■□□□□ 0.82
GTF3C1-205ENST00000564747 ABCA9Q8IUA7 1624 aa20.17■□□□□ 0.82
GTF3C1-205ENST00000564747 MROH1Q8NDA8 1641 aa20.17■□□□□ 0.82
GTF3C1-205ENST00000564747 MYOM2P54296 1465 aa20.16■□□□□ 0.82
GTF3C1-205ENST00000564747 NKTRP30414 1462 aaKnown RBP20.16■□□□□ 0.82
GTF3C1-205ENST00000564747 E9PSI1 815 aa20.15■□□□□ 0.82
GTF3C1-205ENST00000564747 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
GTF3C1-205ENST00000564747 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
GTF3C1-205ENST00000564747 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
GTF3C1-205ENST00000564747 RGS3P49796 1198 aa20.13■□□□□ 0.81
GTF3C1-205ENST00000564747 C8orf34Q49A92 452 aa20.13■□□□□ 0.81
GTF3C1-205ENST00000564747 KIF1BO60333 1816 aa20.13■□□□□ 0.81
GTF3C1-205ENST00000564747 SLC4A3P48751 1232 aa20.12■□□□□ 0.81
GTF3C1-205ENST00000564747 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
GTF3C1-205ENST00000564747 TRAK1Q9UPV9 953 aa20.12■□□□□ 0.81
GTF3C1-205ENST00000564747 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
GTF3C1-205ENST00000564747 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
GTF3C1-205ENST00000564747 EFCAB6Q5THR3 1501 aa20.11■□□□□ 0.81
GTF3C1-205ENST00000564747 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
GTF3C1-205ENST00000564747 NOS1P29475 1434 aa20.1■□□□□ 0.81
GTF3C1-205ENST00000564747 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
GTF3C1-205ENST00000564747 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
GTF3C1-205ENST00000564747 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
GTF3C1-205ENST00000564747 SLC12A5Q9H2X9 1139 aa20.09■□□□□ 0.81
GTF3C1-205ENST00000564747 NRXN1Q9ULB1 1477 aa20.08■□□□□ 0.81
GTF3C1-205ENST00000564747 PPRC1Q5VV67 1664 aaKnown RBP20.08■□□□□ 0.81
GTF3C1-205ENST00000564747 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
GTF3C1-205ENST00000564747 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.8
GTF3C1-205ENST00000564747 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
GTF3C1-205ENST00000564747 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
GTF3C1-205ENST00000564747 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
GTF3C1-205ENST00000564747 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
GTF3C1-205ENST00000564747 IGHDP01880 384 aa20.06■□□□□ 0.8
GTF3C1-205ENST00000564747 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
GTF3C1-205ENST00000564747 NSD3Q9BZ95 1437 aa20.06■□□□□ 0.8
GTF3C1-205ENST00000564747 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
GTF3C1-205ENST00000564747 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
GTF3C1-205ENST00000564747 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
GTF3C1-205ENST00000564747 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
GTF3C1-205ENST00000564747 MYO3AQ8NEV4 1616 aa20.04■□□□□ 0.8
GTF3C1-205ENST00000564747 GGT6Q6P531 493 aa20.04■□□□□ 0.8
GTF3C1-205ENST00000564747 PANK1Q8TE04 598 aa20.04■□□□□ 0.8
GTF3C1-205ENST00000564747 C14orf93Q9H972 538 aaKnown RBP20.04■□□□□ 0.8
GTF3C1-205ENST00000564747 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
GTF3C1-205ENST00000564747 PDE3AQ14432 1141 aa20.02■□□□□ 0.8
GTF3C1-205ENST00000564747 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
GTF3C1-205ENST00000564747 ADGRB3O60242 1522 aa20.02■□□□□ 0.8
GTF3C1-205ENST00000564747 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
GTF3C1-205ENST00000564747 LMTK2Q8IWU2 1503 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms