RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ZFYVE16Q7Z3T8 1539 aa9.97□□□□□ -0.81
HERPUD1-209ENST00000564678 ZBTB7CA1YPR0 619 aa9.96□□□□□ -0.82
HERPUD1-209ENST00000564678 PRAG1Q86YV5 1406 aa9.96□□□□□ -0.82
HERPUD1-209ENST00000564678 PLCD3Q8N3E9 789 aa9.95□□□□□ -0.82
HERPUD1-209ENST00000564678 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
HERPUD1-209ENST00000564678 SCAPERQ9BY12 1400 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 DHX29Q7Z478 1369 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 IGSF3O75054 1194 aa9.94□□□□□ -0.82
HERPUD1-209ENST00000564678 KANK1Q14678 1352 aa9.93□□□□□ -0.82
HERPUD1-209ENST00000564678 LAMC1P11047 1609 aa9.93□□□□□ -0.82
HERPUD1-209ENST00000564678 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
HERPUD1-209ENST00000564678 A2MP01023 1474 aa9.93□□□□□ -0.82
HERPUD1-209ENST00000564678 EIF2AK4Q9P2K8 1649 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-209ENST00000564678 SUPT16HQ9Y5B9 1047 aaKnown RBP9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 PTPRTO14522 1441 aa9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 ST20-MTHFSA0A0A6YYL1 179 aa9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
HERPUD1-209ENST00000564678 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
HERPUD1-209ENST00000564678 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
HERPUD1-209ENST00000564678 TET3O43151 1660 aa9.91□□□□□ -0.82
HERPUD1-209ENST00000564678 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
HERPUD1-209ENST00000564678 E9PCH4 1651 aa9.9□□□□□ -0.82
HERPUD1-209ENST00000564678 TRPM2O94759 1503 aa9.9□□□□□ -0.82
HERPUD1-209ENST00000564678 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
HERPUD1-209ENST00000564678 CD109Q6YHK3 1445 aa9.9□□□□□ -0.83
HERPUD1-209ENST00000564678 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
HERPUD1-209ENST00000564678 MRS2Q9HD23 443 aa9.89□□□□□ -0.83
HERPUD1-209ENST00000564678 PRDM15P57071 1507 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-209ENST00000564678 KIF3BO15066 747 aa9.88□□□□□ -0.83
HERPUD1-209ENST00000564678 CACNB1Q02641 598 aaPredicted RBP9.88□□□□□ -0.83
HERPUD1-209ENST00000564678 SPHKAPQ2M3C7 1700 aa9.88□□□□□ -0.83
HERPUD1-209ENST00000564678 APBB1O00213 710 aa9.88□□□□□ -0.83
HERPUD1-209ENST00000564678 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
HERPUD1-209ENST00000564678 KIDINS220Q9ULH0 1771 aa9.87□□□□□ -0.83
HERPUD1-209ENST00000564678 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
HERPUD1-209ENST00000564678 GPBP1L1Q9HC44 474 aaPredicted RBP9.87□□□□□ -0.83
HERPUD1-209ENST00000564678 MLH3Q9UHC1 1453 aa9.87□□□□□ -0.83
HERPUD1-209ENST00000564678 CEP152O94986 1710 aa9.87□□□□□ -0.83
HERPUD1-209ENST00000564678 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 WASHC2CQ9Y4E1 1318 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 NEFLP07196 543 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 CCDC184Q52MB2 194 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 POLR3GLQ9BT43 218 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 NEO1Q92859 1461 aa9.86□□□□□ -0.83
HERPUD1-209ENST00000564678 RALBP1Q15311 655 aa9.85□□□□□ -0.83
HERPUD1-209ENST00000564678 POGZQ7Z3K3 1410 aa9.85□□□□□ -0.83
HERPUD1-209ENST00000564678 TESK2Q96S53 571 aa9.85□□□□□ -0.83
HERPUD1-209ENST00000564678 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
HERPUD1-209ENST00000564678 ZBED9Q6R2W3 1325 aa9.84□□□□□ -0.83
HERPUD1-209ENST00000564678 RNF17Q9BXT8 1623 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-209ENST00000564678 TMF1P82094 1093 aa9.84□□□□□ -0.83
HERPUD1-209ENST00000564678 FAM9BQ8IZU0 186 aa9.84□□□□□ -0.83
HERPUD1-209ENST00000564678 IL27Q8NEV9 243 aa9.84□□□□□ -0.83
HERPUD1-209ENST00000564678 CLTCL1P53675 1640 aa9.83□□□□□ -0.84
HERPUD1-209ENST00000564678 EIF5BO60841 1220 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-209ENST00000564678 MYT1Q01538 1121 aa9.83□□□□□ -0.84
HERPUD1-209ENST00000564678 COL17A1Q9UMD9 1497 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-209ENST00000564678 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 CADPS2Q86UW7 1296 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 HECW2Q9P2P5 1572 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 KIAA1210Q9ULL0 1709 aa9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-209ENST00000564678 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 MYBBP1AQ9BQG0 1328 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
HERPUD1-209ENST00000564678 KIF1BO60333 1816 aa9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 TMC1Q8TDI8 760 aa9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 MYOM2P54296 1465 aa9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 SCAF11Q99590 1463 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 STK25O00506 426 aa9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 KCTD17Q8N5Z5 321 aa9.8□□□□□ -0.84
HERPUD1-209ENST00000564678 IQGAP1P46940 1657 aa9.79□□□□□ -0.84
HERPUD1-209ENST00000564678 GLI2P10070 1586 aa9.79□□□□□ -0.84
HERPUD1-209ENST00000564678 EIF3AQ14152 1382 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 PPRC1Q5VV67 1664 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 FRMPD1Q5SYB0 1578 aa9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 PARD3Q8TEW0 1356 aa9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
HERPUD1-209ENST00000564678 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.84
HERPUD1-209ENST00000564678 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
HERPUD1-209ENST00000564678 LRPPRCP42704 1394 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-209ENST00000564678 RPGRIP1LQ68CZ1 1315 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 NPATQ14207 1427 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 ZMYND10O75800 440 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 POLA2Q14181 598 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 NRXN1Q9ULB1 1477 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms