RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
TCF4-224ENST00000564403 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
TCF4-224ENST00000564403 ATP7AQ04656 1500 aa12.28□□□□□ -0.44
TCF4-224ENST00000564403 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.44
TCF4-224ENST00000564403 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.45
TCF4-224ENST00000564403 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
TCF4-224ENST00000564403 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
TCF4-224ENST00000564403 DHX29Q7Z478 1369 aaKnown RBP12.26□□□□□ -0.45
TCF4-224ENST00000564403 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
TCF4-224ENST00000564403 IPO4Q8TEX9 1081 aaKnown RBP12.24□□□□□ -0.45
TCF4-224ENST00000564403 ATP10AO60312 1499 aa12.24□□□□□ -0.45
TCF4-224ENST00000564403 E9PCH4 1651 aa12.23□□□□□ -0.45
TCF4-224ENST00000564403 FKBP8Q14318 412 aa12.23□□□□□ -0.45
TCF4-224ENST00000564403 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
TCF4-224ENST00000564403 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
TCF4-224ENST00000564403 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
TCF4-224ENST00000564403 TESK2Q96S53 571 aa12.22□□□□□ -0.45
TCF4-224ENST00000564403 KANK1Q14678 1352 aa12.22□□□□□ -0.45
TCF4-224ENST00000564403 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.46
TCF4-224ENST00000564403 CNPY4Q8N129 248 aa12.2□□□□□ -0.46
TCF4-224ENST00000564403 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
TCF4-224ENST00000564403 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
TCF4-224ENST00000564403 DISP3Q9P2K9 1392 aa12.2□□□□□ -0.46
TCF4-224ENST00000564403 TEX2Q8IWB9 1127 aa12.2□□□□□ -0.46
TCF4-224ENST00000564403 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
TCF4-224ENST00000564403 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
TCF4-224ENST00000564403 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
TCF4-224ENST00000564403 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
TCF4-224ENST00000564403 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
TCF4-224ENST00000564403 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
TCF4-224ENST00000564403 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
TCF4-224ENST00000564403 PTPRTO14522 1441 aa12.18□□□□□ -0.46
TCF4-224ENST00000564403 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
TCF4-224ENST00000564403 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
TCF4-224ENST00000564403 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
TCF4-224ENST00000564403 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
TCF4-224ENST00000564403 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
TCF4-224ENST00000564403 WASHC2CQ9Y4E1 1318 aa12.17□□□□□ -0.46
TCF4-224ENST00000564403 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
TCF4-224ENST00000564403 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.17□□□□□ -0.46
TCF4-224ENST00000564403 POLR1AO95602 1720 aaPredicted RBP12.17□□□□□ -0.46
TCF4-224ENST00000564403 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
TCF4-224ENST00000564403 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
TCF4-224ENST00000564403 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
TCF4-224ENST00000564403 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
TCF4-224ENST00000564403 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
TCF4-224ENST00000564403 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
TCF4-224ENST00000564403 PANK3Q9H999 370 aa12.15□□□□□ -0.46
TCF4-224ENST00000564403 TRPM2O94759 1503 aa12.15□□□□□ -0.46
TCF4-224ENST00000564403 PRDM15P57071 1507 aaPredicted RBP12.15□□□□□ -0.46
TCF4-224ENST00000564403 VWDEQ8N2E2 1590 aa12.14□□□□□ -0.47
TCF4-224ENST00000564403 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
TCF4-224ENST00000564403 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
TCF4-224ENST00000564403 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 TET3O43151 1660 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 MSH5O43196 834 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 TMF1P82094 1093 aa12.13□□□□□ -0.47
TCF4-224ENST00000564403 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
TCF4-224ENST00000564403 NPATQ14207 1427 aa12.12□□□□□ -0.47
TCF4-224ENST00000564403 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
TCF4-224ENST00000564403 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
TCF4-224ENST00000564403 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
TCF4-224ENST00000564403 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
TCF4-224ENST00000564403 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
TCF4-224ENST00000564403 CEP152O94986 1710 aa12.1□□□□□ -0.47
TCF4-224ENST00000564403 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
TCF4-224ENST00000564403 RIMBP3CA6NJZ7 1639 aa12.1□□□□□ -0.47
TCF4-224ENST00000564403 RIMBP3BA6NNM3 1639 aa12.1□□□□□ -0.47
TCF4-224ENST00000564403 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
TCF4-224ENST00000564403 RIMBP3Q9UFD9 1639 aa12.1□□□□□ -0.47
TCF4-224ENST00000564403 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
TCF4-224ENST00000564403 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
TCF4-224ENST00000564403 MADDQ8WXG6 1647 aa12.09□□□□□ -0.47
TCF4-224ENST00000564403 EFCAB6Q5THR3 1501 aa12.09□□□□□ -0.47
TCF4-224ENST00000564403 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.47
TCF4-224ENST00000564403 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
TCF4-224ENST00000564403 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
TCF4-224ENST00000564403 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
TCF4-224ENST00000564403 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
TCF4-224ENST00000564403 NEO1Q92859 1461 aa12.08□□□□□ -0.48
TCF4-224ENST00000564403 NOS1P29475 1434 aa12.07□□□□□ -0.48
TCF4-224ENST00000564403 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
TCF4-224ENST00000564403 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
TCF4-224ENST00000564403 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
TCF4-224ENST00000564403 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
TCF4-224ENST00000564403 IDI1Q13907 227 aa12.06□□□□□ -0.48
TCF4-224ENST00000564403 MLECQ14165 292 aa12.06□□□□□ -0.48
TCF4-224ENST00000564403 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
TCF4-224ENST00000564403 RALBP1Q15311 655 aa12.06□□□□□ -0.48
TCF4-224ENST00000564403 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
TCF4-224ENST00000564403 KCNG1Q9UIX4 513 aa12.05□□□□□ -0.48
TCF4-224ENST00000564403 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
TCF4-224ENST00000564403 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
TCF4-224ENST00000564403 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
TCF4-224ENST00000564403 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
TCF4-224ENST00000564403 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
TCF4-224ENST00000564403 ABCC3O15438 1527 aa12.04□□□□□ -0.48
TCF4-224ENST00000564403 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms