RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
CCDC187-201ENST00000563590 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
CCDC187-201ENST00000563590 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
CCDC187-201ENST00000563590 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
CCDC187-201ENST00000563590 MLECQ14165 292 aa16.32■□□□□ 0.2
CCDC187-201ENST00000563590 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
CCDC187-201ENST00000563590 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
CCDC187-201ENST00000563590 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
CCDC187-201ENST00000563590 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
CCDC187-201ENST00000563590 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
CCDC187-201ENST00000563590 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
CCDC187-201ENST00000563590 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
CCDC187-201ENST00000563590 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
CCDC187-201ENST00000563590 ZMYM4Q5VZL5 1548 aa16.28■□□□□ 0.2
CCDC187-201ENST00000563590 RAPGEF3O95398 923 aa16.28■□□□□ 0.2
CCDC187-201ENST00000563590 TESK2Q96S53 571 aa16.28■□□□□ 0.2
CCDC187-201ENST00000563590 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
CCDC187-201ENST00000563590 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.19
CCDC187-201ENST00000563590 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
CCDC187-201ENST00000563590 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
CCDC187-201ENST00000563590 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
CCDC187-201ENST00000563590 STK26Q9P289 416 aa16.25■□□□□ 0.19
CCDC187-201ENST00000563590 COL17A1Q9UMD9 1497 aaPredicted RBP16.25■□□□□ 0.19
CCDC187-201ENST00000563590 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
CCDC187-201ENST00000563590 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
CCDC187-201ENST00000563590 INSRP06213 1382 aa16.24■□□□□ 0.19
CCDC187-201ENST00000563590 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
CCDC187-201ENST00000563590 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
CCDC187-201ENST00000563590 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
CCDC187-201ENST00000563590 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
CCDC187-201ENST00000563590 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
CCDC187-201ENST00000563590 TMF1P82094 1093 aa16.23■□□□□ 0.19
CCDC187-201ENST00000563590 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
CCDC187-201ENST00000563590 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
CCDC187-201ENST00000563590 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
CCDC187-201ENST00000563590 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
CCDC187-201ENST00000563590 BCAR3O75815 825 aa16.22■□□□□ 0.19
CCDC187-201ENST00000563590 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
CCDC187-201ENST00000563590 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
CCDC187-201ENST00000563590 SEC24BO95487 1268 aa16.21■□□□□ 0.19
CCDC187-201ENST00000563590 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
CCDC187-201ENST00000563590 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
CCDC187-201ENST00000563590 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
CCDC187-201ENST00000563590 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
CCDC187-201ENST00000563590 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 ABCA8O94911 1581 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 IGHDP01880 384 aa16.19■□□□□ 0.18
CCDC187-201ENST00000563590 USP19O94966 1318 aa16.18■□□□□ 0.18
CCDC187-201ENST00000563590 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC187-201ENST00000563590 ANP32BQ92688 251 aaKnown RBP16.18■□□□□ 0.18
CCDC187-201ENST00000563590 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
CCDC187-201ENST00000563590 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
CCDC187-201ENST00000563590 A2MP01023 1474 aa16.17■□□□□ 0.18
CCDC187-201ENST00000563590 SHANK2Q9UPX8 1470 aa16.17■□□□□ 0.18
CCDC187-201ENST00000563590 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
CCDC187-201ENST00000563590 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
CCDC187-201ENST00000563590 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
CCDC187-201ENST00000563590 SOX12O15370 315 aa16.16■□□□□ 0.18
CCDC187-201ENST00000563590 RBM10P98175 930 aaKnown RBP16.16■□□□□ 0.18
CCDC187-201ENST00000563590 APAF1O14727 1248 aa16.16■□□□□ 0.18
CCDC187-201ENST00000563590 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
CCDC187-201ENST00000563590 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
CCDC187-201ENST00000563590 TRAK2O60296 914 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 KANK1Q14678 1352 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 ADCY10Q96PN6 1610 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 MAGI2Q86UL8 1455 aa16.14■□□□□ 0.17
CCDC187-201ENST00000563590 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
CCDC187-201ENST00000563590 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
CCDC187-201ENST00000563590 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
CCDC187-201ENST00000563590 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
CCDC187-201ENST00000563590 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
CCDC187-201ENST00000563590 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
CCDC187-201ENST00000563590 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
CCDC187-201ENST00000563590 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
CCDC187-201ENST00000563590 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
CCDC187-201ENST00000563590 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
CCDC187-201ENST00000563590 PLCH2O75038 1416 aa16.11■□□□□ 0.17
CCDC187-201ENST00000563590 RRP9O43818 475 aaKnown RBP16.11■□□□□ 0.17
CCDC187-201ENST00000563590 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
CCDC187-201ENST00000563590 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
CCDC187-201ENST00000563590 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
CCDC187-201ENST00000563590 PODXL2Q9NZ53 605 aa16.1■□□□□ 0.17
CCDC187-201ENST00000563590 ESPNB1AK53 854 aa16.1■□□□□ 0.17
CCDC187-201ENST00000563590 FANCAO15360 1455 aa16.09■□□□□ 0.17
CCDC187-201ENST00000563590 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
CCDC187-201ENST00000563590 MCM4P33991 863 aa16.09■□□□□ 0.17
CCDC187-201ENST00000563590 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
CCDC187-201ENST00000563590 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
CCDC187-201ENST00000563590 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
CCDC187-201ENST00000563590 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
CCDC187-201ENST00000563590 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
CCDC187-201ENST00000563590 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
CCDC187-201ENST00000563590 E9PSI1 815 aa16.07■□□□□ 0.16
CCDC187-201ENST00000563590 MSNP26038 577 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms