RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 CCDC141Q6ZP82 1450 aa16■□□□□ 0.15
SNX29-202ENST00000563308 AHDC1Q5TGY3 1603 aaPredicted RBP15.98■□□□□ 0.15
SNX29-202ENST00000563308 ATF3P18847 181 aa15.98■□□□□ 0.15
SNX29-202ENST00000563308 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
SNX29-202ENST00000563308 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
SNX29-202ENST00000563308 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
SNX29-202ENST00000563308 SLIT1O75093 1534 aa15.98■□□□□ 0.15
SNX29-202ENST00000563308 CADPS2Q86UW7 1296 aa15.97■□□□□ 0.15
SNX29-202ENST00000563308 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
SNX29-202ENST00000563308 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
SNX29-202ENST00000563308 USP21Q9UK80 565 aa15.95■□□□□ 0.14
SNX29-202ENST00000563308 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
SNX29-202ENST00000563308 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
SNX29-202ENST00000563308 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
SNX29-202ENST00000563308 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
SNX29-202ENST00000563308 MYOM3Q5VTT5 1437 aa15.93■□□□□ 0.14
SNX29-202ENST00000563308 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
SNX29-202ENST00000563308 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
SNX29-202ENST00000563308 HRCP23327 699 aa15.92■□□□□ 0.14
SNX29-202ENST00000563308 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
SNX29-202ENST00000563308 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
SNX29-202ENST00000563308 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
SNX29-202ENST00000563308 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
SNX29-202ENST00000563308 DEFB132Q7Z7B7 95 aa15.9■□□□□ 0.14
SNX29-202ENST00000563308 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
SNX29-202ENST00000563308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNX29-202ENST00000563308 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
SNX29-202ENST00000563308 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
SNX29-202ENST00000563308 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
SNX29-202ENST00000563308 NCOA3Q9Y6Q9 1424 aa15.86■□□□□ 0.13
SNX29-202ENST00000563308 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
SNX29-202ENST00000563308 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
SNX29-202ENST00000563308 ABCC5O15440 1437 aa15.83■□□□□ 0.12
SNX29-202ENST00000563308 APLP2Q06481 763 aa15.82■□□□□ 0.12
SNX29-202ENST00000563308 TET3O43151 1660 aa15.8■□□□□ 0.12
SNX29-202ENST00000563308 MROH1Q8NDA8 1641 aa15.8■□□□□ 0.12
SNX29-202ENST00000563308 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
SNX29-202ENST00000563308 BAG6P46379 1132 aa15.8■□□□□ 0.12
SNX29-202ENST00000563308 PNPLA6Q8IY17 1366 aa15.79■□□□□ 0.12
SNX29-202ENST00000563308 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
SNX29-202ENST00000563308 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
SNX29-202ENST00000563308 ATRNO75882 1429 aa15.78■□□□□ 0.12
SNX29-202ENST00000563308 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
SNX29-202ENST00000563308 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
SNX29-202ENST00000563308 KIF15Q9NS87 1388 aa15.77■□□□□ 0.12
SNX29-202ENST00000563308 PIK3C2BO00750 1634 aa15.77■□□□□ 0.12
SNX29-202ENST00000563308 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.12
SNX29-202ENST00000563308 C1QTNF8P60827 252 aa15.77■□□□□ 0.12
SNX29-202ENST00000563308 FNBP4Q8N3X1 1017 aaPredicted RBP15.77■□□□□ 0.12
SNX29-202ENST00000563308 EP400Q96L91 3159 aa15.77■□□□□ 0.11
SNX29-202ENST00000563308 DAPK1P53355 1430 aa15.77■□□□□ 0.11
SNX29-202ENST00000563308 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
SNX29-202ENST00000563308 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
SNX29-202ENST00000563308 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
SNX29-202ENST00000563308 GJD4Q96KN9 370 aaPredicted RBP15.75■□□□□ 0.11
SNX29-202ENST00000563308 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
SNX29-202ENST00000563308 CROCC2H7BZ55 1655 aa15.75■□□□□ 0.11
SNX29-202ENST00000563308 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
SNX29-202ENST00000563308 PPP1R1BQ9UD71 204 aaPredicted RBP15.74■□□□□ 0.11
SNX29-202ENST00000563308 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
SNX29-202ENST00000563308 CEP152O94986 1710 aa15.72■□□□□ 0.11
SNX29-202ENST00000563308 UNC13BO14795 1591 aa15.72■□□□□ 0.11
SNX29-202ENST00000563308 PTCH1Q13635 1447 aa15.72■□□□□ 0.11
SNX29-202ENST00000563308 ZNF784Q8NCA9 323 aaPredicted RBP15.72■□□□□ 0.11
SNX29-202ENST00000563308 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.11
SNX29-202ENST00000563308 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
SNX29-202ENST00000563308 ARHGAP31Q2M1Z3 1444 aa15.68■□□□□ 0.1
SNX29-202ENST00000563308 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
SNX29-202ENST00000563308 IDI1Q13907 227 aa15.68■□□□□ 0.1
SNX29-202ENST00000563308 ADGRL2O95490 1459 aa15.67■□□□□ 0.1
SNX29-202ENST00000563308 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
SNX29-202ENST00000563308 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
SNX29-202ENST00000563308 DCCP43146 1447 aa15.67■□□□□ 0.1
SNX29-202ENST00000563308 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
SNX29-202ENST00000563308 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
SNX29-202ENST00000563308 LMTK2Q8IWU2 1503 aa15.63■□□□□ 0.09
SNX29-202ENST00000563308 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
SNX29-202ENST00000563308 KRT27Q7Z3Y8 459 aa15.62■□□□□ 0.09
SNX29-202ENST00000563308 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
SNX29-202ENST00000563308 EN1Q05925 392 aaPredicted RBP15.61■□□□□ 0.09
SNX29-202ENST00000563308 KANK1Q14678 1352 aa15.61■□□□□ 0.09
SNX29-202ENST00000563308 MST1RQ04912 1400 aa15.6■□□□□ 0.09
SNX29-202ENST00000563308 A0A0G2JS52 829 aa15.6■□□□□ 0.09
SNX29-202ENST00000563308 MYT1Q01538 1121 aa15.6■□□□□ 0.09
SNX29-202ENST00000563308 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
SNX29-202ENST00000563308 ADGRB3O60242 1522 aa15.59■□□□□ 0.09
SNX29-202ENST00000563308 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNX29-202ENST00000563308 AMOTL2Q9Y2J4 779 aa15.59■□□□□ 0.09
SNX29-202ENST00000563308 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
SNX29-202ENST00000563308 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
SNX29-202ENST00000563308 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
SNX29-202ENST00000563308 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
SNX29-202ENST00000563308 CCDC9Q9Y3X0 531 aaKnown RBP15.58■□□□□ 0.08
SNX29-202ENST00000563308 BRWD3Q6RI45 1802 aa15.58■□□□□ 0.08
SNX29-202ENST00000563308 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
SNX29-202ENST00000563308 SPON1Q9HCB6 807 aa15.57■□□□□ 0.08
SNX29-202ENST00000563308 NOS1P29475 1434 aa15.57■□□□□ 0.08
SNX29-202ENST00000563308 GIGYF1O75420 1035 aaPredicted RBP15.56■□□□□ 0.08
SNX29-202ENST00000563308 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
SNX29-202ENST00000563308 RIMS2Q9UQ26 1411 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms