RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
USB1-207ENST00000563149 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
USB1-207ENST00000563149 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
USB1-207ENST00000563149 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
USB1-207ENST00000563149 KANK1Q14678 1352 aa17.29■□□□□ 0.36
USB1-207ENST00000563149 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
USB1-207ENST00000563149 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
USB1-207ENST00000563149 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
USB1-207ENST00000563149 PPP2R1AP30153 589 aa17.28■□□□□ 0.36
USB1-207ENST00000563149 AMER1Q5JTC6 1135 aaPredicted RBP17.27■□□□□ 0.35
USB1-207ENST00000563149 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
USB1-207ENST00000563149 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
USB1-207ENST00000563149 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
USB1-207ENST00000563149 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
USB1-207ENST00000563149 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
USB1-207ENST00000563149 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
USB1-207ENST00000563149 PDE4AP27815 886 aa17.24■□□□□ 0.35
USB1-207ENST00000563149 BACH2Q9BYV9 841 aa17.24■□□□□ 0.35
USB1-207ENST00000563149 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
USB1-207ENST00000563149 MYOM1P52179 1685 aa17.23■□□□□ 0.35
USB1-207ENST00000563149 MYOM2P54296 1465 aa17.23■□□□□ 0.35
USB1-207ENST00000563149 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
USB1-207ENST00000563149 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
USB1-207ENST00000563149 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
USB1-207ENST00000563149 MAP3K4Q9Y6R4 1608 aa17.21■□□□□ 0.35
USB1-207ENST00000563149 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
USB1-207ENST00000563149 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
USB1-207ENST00000563149 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
USB1-207ENST00000563149 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
USB1-207ENST00000563149 FANCAO15360 1455 aa17.19■□□□□ 0.34
USB1-207ENST00000563149 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
USB1-207ENST00000563149 PLIN1O60240 522 aa17.18■□□□□ 0.34
USB1-207ENST00000563149 KIF1BO60333 1816 aa17.17■□□□□ 0.34
USB1-207ENST00000563149 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
USB1-207ENST00000563149 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
USB1-207ENST00000563149 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
USB1-207ENST00000563149 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
USB1-207ENST00000563149 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
USB1-207ENST00000563149 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
USB1-207ENST00000563149 TRMT2AQ8IZ69 625 aaKnown RBP17.15■□□□□ 0.34
USB1-207ENST00000563149 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
USB1-207ENST00000563149 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
USB1-207ENST00000563149 ABCA6Q8N139 1617 aa17.14■□□□□ 0.34
USB1-207ENST00000563149 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 EFCAB6Q5THR3 1501 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 KIF3BO15066 747 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
USB1-207ENST00000563149 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
USB1-207ENST00000563149 NBR1Q14596 966 aa17.12■□□□□ 0.33
USB1-207ENST00000563149 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
USB1-207ENST00000563149 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
USB1-207ENST00000563149 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
USB1-207ENST00000563149 C20orf194Q5TEA3 1177 aa17.1■□□□□ 0.33
USB1-207ENST00000563149 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
USB1-207ENST00000563149 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
USB1-207ENST00000563149 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
USB1-207ENST00000563149 E9PSI1 815 aa17.09■□□□□ 0.33
USB1-207ENST00000563149 ADGRF5Q8IZF2 1346 aa17.08■□□□□ 0.32
USB1-207ENST00000563149 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
USB1-207ENST00000563149 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
USB1-207ENST00000563149 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
USB1-207ENST00000563149 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
USB1-207ENST00000563149 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
USB1-207ENST00000563149 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
USB1-207ENST00000563149 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
USB1-207ENST00000563149 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
USB1-207ENST00000563149 UGGT1Q9NYU2 1555 aa17.05■□□□□ 0.32
USB1-207ENST00000563149 APAF1O14727 1248 aa17.05■□□□□ 0.32
USB1-207ENST00000563149 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
USB1-207ENST00000563149 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
USB1-207ENST00000563149 CFAP74Q9C0B2 1584 aa17.03■□□□□ 0.32
USB1-207ENST00000563149 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
USB1-207ENST00000563149 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
USB1-207ENST00000563149 RPGRIP1LQ68CZ1 1315 aa17.02■□□□□ 0.31
USB1-207ENST00000563149 CCDC146Q8IYE0 955 aa17.02■□□□□ 0.31
USB1-207ENST00000563149 ZC3H13Q5T200 1668 aaKnown RBP17.02■□□□□ 0.31
USB1-207ENST00000563149 USP32Q8NFA0 1604 aa17.01■□□□□ 0.31
USB1-207ENST00000563149 PPLO60437 1756 aa17.01■□□□□ 0.31
USB1-207ENST00000563149 NOS1P29475 1434 aa17.01■□□□□ 0.31
USB1-207ENST00000563149 PDE3AQ14432 1141 aa17■□□□□ 0.31
USB1-207ENST00000563149 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
USB1-207ENST00000563149 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
USB1-207ENST00000563149 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
USB1-207ENST00000563149 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
USB1-207ENST00000563149 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
USB1-207ENST00000563149 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
USB1-207ENST00000563149 AAMPQ13685 434 aa16.97■□□□□ 0.31
USB1-207ENST00000563149 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
USB1-207ENST00000563149 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
USB1-207ENST00000563149 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
USB1-207ENST00000563149 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
USB1-207ENST00000563149 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
USB1-207ENST00000563149 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
USB1-207ENST00000563149 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
USB1-207ENST00000563149 NPATQ14207 1427 aa16.95■□□□□ 0.3
USB1-207ENST00000563149 NEFMP07197 916 aa16.94■□□□□ 0.3
USB1-207ENST00000563149 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
USB1-207ENST00000563149 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms