RNA–Protein interactions for RNA: ENST00000562929.1

COX4I1-204, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 452 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-204ENST00000562929 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
COX4I1-204ENST00000562929 C14orf93Q9H972 538 aaKnown RBP17.47■□□□□ 0.39
COX4I1-204ENST00000562929 SYNMO15061 1565 aa17.47■□□□□ 0.39
COX4I1-204ENST00000562929 PIK3C2BO00750 1634 aa17.47■□□□□ 0.39
COX4I1-204ENST00000562929 NRXN1Q9ULB1 1477 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 TMF1P82094 1093 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.39
COX4I1-204ENST00000562929 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
COX4I1-204ENST00000562929 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
COX4I1-204ENST00000562929 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
COX4I1-204ENST00000562929 EIF3AQ14152 1382 aaKnown RBP17.44■□□□□ 0.38
COX4I1-204ENST00000562929 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
COX4I1-204ENST00000562929 TESK2Q96S53 571 aa17.44■□□□□ 0.38
COX4I1-204ENST00000562929 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
COX4I1-204ENST00000562929 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
COX4I1-204ENST00000562929 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
COX4I1-204ENST00000562929 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
COX4I1-204ENST00000562929 MROH2AA6NES4 1674 aa17.42■□□□□ 0.38
COX4I1-204ENST00000562929 IFT172Q9UG01 1749 aa17.41■□□□□ 0.38
COX4I1-204ENST00000562929 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
COX4I1-204ENST00000562929 PPLO60437 1756 aa17.39■□□□□ 0.37
COX4I1-204ENST00000562929 SPATA31D1Q6ZQQ2 1576 aa17.39■□□□□ 0.37
COX4I1-204ENST00000562929 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
COX4I1-204ENST00000562929 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
COX4I1-204ENST00000562929 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
COX4I1-204ENST00000562929 TMEM131LA2VDJ0 1609 aa17.36■□□□□ 0.37
COX4I1-204ENST00000562929 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
COX4I1-204ENST00000562929 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
COX4I1-204ENST00000562929 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
COX4I1-204ENST00000562929 NUTM2DQ5VT03 806 aaPredicted RBP17.35■□□□□ 0.37
COX4I1-204ENST00000562929 TNRQ92752 1358 aa17.34■□□□□ 0.37
COX4I1-204ENST00000562929 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
COX4I1-204ENST00000562929 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
COX4I1-204ENST00000562929 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
COX4I1-204ENST00000562929 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
COX4I1-204ENST00000562929 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
COX4I1-204ENST00000562929 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
COX4I1-204ENST00000562929 RALBP1Q15311 655 aa17.29■□□□□ 0.36
COX4I1-204ENST00000562929 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
COX4I1-204ENST00000562929 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
COX4I1-204ENST00000562929 PANK3Q9H999 370 aa17.28■□□□□ 0.36
COX4I1-204ENST00000562929 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
COX4I1-204ENST00000562929 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
COX4I1-204ENST00000562929 ADGRB1O14514 1584 aa17.27■□□□□ 0.35
COX4I1-204ENST00000562929 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
COX4I1-204ENST00000562929 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
COX4I1-204ENST00000562929 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
COX4I1-204ENST00000562929 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
COX4I1-204ENST00000562929 STK26Q9P289 416 aa17.22■□□□□ 0.35
COX4I1-204ENST00000562929 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
COX4I1-204ENST00000562929 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
COX4I1-204ENST00000562929 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
COX4I1-204ENST00000562929 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
COX4I1-204ENST00000562929 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
COX4I1-204ENST00000562929 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
COX4I1-204ENST00000562929 POGKQ9P215 609 aa17.2■□□□□ 0.34
COX4I1-204ENST00000562929 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
COX4I1-204ENST00000562929 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
COX4I1-204ENST00000562929 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
COX4I1-204ENST00000562929 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
COX4I1-204ENST00000562929 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
COX4I1-204ENST00000562929 BCANQ96GW7 911 aa17.18■□□□□ 0.34
COX4I1-204ENST00000562929 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
COX4I1-204ENST00000562929 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
COX4I1-204ENST00000562929 SIRT1Q96EB6 747 aa17.17■□□□□ 0.34
COX4I1-204ENST00000562929 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
COX4I1-204ENST00000562929 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
COX4I1-204ENST00000562929 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
COX4I1-204ENST00000562929 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
COX4I1-204ENST00000562929 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
COX4I1-204ENST00000562929 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
COX4I1-204ENST00000562929 C3P01024 1663 aa17.14■□□□□ 0.33
COX4I1-204ENST00000562929 PRAM1Q96QH2 718 aa17.14■□□□□ 0.33
COX4I1-204ENST00000562929 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
COX4I1-204ENST00000562929 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
COX4I1-204ENST00000562929 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
COX4I1-204ENST00000562929 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
COX4I1-204ENST00000562929 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
COX4I1-204ENST00000562929 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
COX4I1-204ENST00000562929 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
COX4I1-204ENST00000562929 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
COX4I1-204ENST00000562929 QRICH2Q9H0J4 1663 aa17.11■□□□□ 0.33
COX4I1-204ENST00000562929 LTKP29376 864 aa17.11■□□□□ 0.33
COX4I1-204ENST00000562929 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
COX4I1-204ENST00000562929 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
COX4I1-204ENST00000562929 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
COX4I1-204ENST00000562929 DLC1Q96QB1 1528 aa17.1■□□□□ 0.33
COX4I1-204ENST00000562929 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
COX4I1-204ENST00000562929 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
COX4I1-204ENST00000562929 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
COX4I1-204ENST00000562929 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
COX4I1-204ENST00000562929 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
COX4I1-204ENST00000562929 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
COX4I1-204ENST00000562929 PTPRMP28827 1452 aa17.09■□□□□ 0.33
COX4I1-204ENST00000562929 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.32
COX4I1-204ENST00000562929 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
COX4I1-204ENST00000562929 SLIT1O75093 1534 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms