RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
CAPN3-210ENST00000561817 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
CAPN3-210ENST00000561817 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-210ENST00000561817 CD109Q6YHK3 1445 aa9.52□□□□□ -0.89
CAPN3-210ENST00000561817 FANCAO15360 1455 aa9.52□□□□□ -0.89
CAPN3-210ENST00000561817 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
CAPN3-210ENST00000561817 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
CAPN3-210ENST00000561817 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
CAPN3-210ENST00000561817 HOMEZQ8IX15 550 aa9.5□□□□□ -0.89
CAPN3-210ENST00000561817 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
CAPN3-210ENST00000561817 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-210ENST00000561817 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
CAPN3-210ENST00000561817 UNC13BO14795 1591 aa9.5□□□□□ -0.89
CAPN3-210ENST00000561817 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-210ENST00000561817 MAGI2Q86UL8 1455 aa9.49□□□□□ -0.89
CAPN3-210ENST00000561817 DUOX2Q9NRD8 1548 aa9.49□□□□□ -0.89
CAPN3-210ENST00000561817 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-210ENST00000561817 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-210ENST00000561817 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
CAPN3-210ENST00000561817 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 RICTORQ6R327 1708 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 ERBINQ96RT1 1412 aa9.47□□□□□ -0.89
CAPN3-210ENST00000561817 RPRD2Q5VT52 1461 aaKnown RBP9.47□□□□□ -0.89
CAPN3-210ENST00000561817 ZNF467Q7Z7K2 595 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-210ENST00000561817 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
CAPN3-210ENST00000561817 ATP7AQ04656 1500 aa9.46□□□□□ -0.9
CAPN3-210ENST00000561817 KDM5CP41229 1560 aa9.46□□□□□ -0.9
CAPN3-210ENST00000561817 PLCG2P16885 1265 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
CAPN3-210ENST00000561817 NUP155O75694 1391 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 NEO1Q92859 1461 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 IQGAP3Q86VI3 1631 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
CAPN3-210ENST00000561817 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-210ENST00000561817 IFNLR1Q8IU57 520 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-210ENST00000561817 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
CAPN3-210ENST00000561817 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
CAPN3-210ENST00000561817 DEPDC5O75140 1603 aa9.43□□□□□ -0.9
CAPN3-210ENST00000561817 PKD2Q13563 968 aa9.43□□□□□ -0.9
CAPN3-210ENST00000561817 VWDEQ8N2E2 1590 aa9.42□□□□□ -0.9
CAPN3-210ENST00000561817 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
CAPN3-210ENST00000561817 ZNF518AQ6AHZ1 1483 aa9.42□□□□□ -0.9
CAPN3-210ENST00000561817 MLH3Q9UHC1 1453 aa9.42□□□□□ -0.9
CAPN3-210ENST00000561817 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
CAPN3-210ENST00000561817 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-210ENST00000561817 MROH1Q8NDA8 1641 aa9.41□□□□□ -0.9
CAPN3-210ENST00000561817 EIF2AK4Q9P2K8 1649 aaKnown RBP9.41□□□□□ -0.9
CAPN3-210ENST00000561817 DHX29Q7Z478 1369 aaKnown RBP9.4□□□□□ -0.9
CAPN3-210ENST00000561817 POTEMA6NI47 508 aa9.4□□□□□ -0.9
CAPN3-210ENST00000561817 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-210ENST00000561817 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
CAPN3-210ENST00000561817 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-210ENST00000561817 HECW2Q9P2P5 1572 aa9.4□□□□□ -0.9
CAPN3-210ENST00000561817 ATP10AO60312 1499 aa9.4□□□□□ -0.91
CAPN3-210ENST00000561817 COL17A1Q9UMD9 1497 aaPredicted RBP9.4□□□□□ -0.91
CAPN3-210ENST00000561817 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
CAPN3-210ENST00000561817 L3MBTL2Q969R5 705 aa9.39□□□□□ -0.91
CAPN3-210ENST00000561817 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
CAPN3-210ENST00000561817 ARHGEF40Q8TER5 1519 aa9.39□□□□□ -0.91
CAPN3-210ENST00000561817 BCORL1Q5H9F3 1711 aa9.39□□□□□ -0.91
CAPN3-210ENST00000561817 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
CAPN3-210ENST00000561817 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
CAPN3-210ENST00000561817 PRDM15P57071 1507 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-210ENST00000561817 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
CAPN3-210ENST00000561817 DIEXFQ68CQ4 756 aaKnown RBP9.37□□□□□ -0.91
CAPN3-210ENST00000561817 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-210ENST00000561817 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
CAPN3-210ENST00000561817 A2MP01023 1474 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 GOLGA2Q08379 1002 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 ZMYM4Q5VZL5 1548 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 LMTK2Q8IWU2 1503 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 E9PCH4 1651 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 TET3O43151 1660 aa9.36□□□□□ -0.91
CAPN3-210ENST00000561817 PTPRTO14522 1441 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 PSEN1P49768 467 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 NBPF8Q3BBV2 869 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 DIP2CQ9Y2E4 1556 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
CAPN3-210ENST00000561817 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
CAPN3-210ENST00000561817 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
CAPN3-210ENST00000561817 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
CAPN3-210ENST00000561817 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
CAPN3-210ENST00000561817 FER1L4A9Z1Z3 1794 aa9.32□□□□□ -0.92
CAPN3-210ENST00000561817 TRPM2O94759 1503 aa9.32□□□□□ -0.92
CAPN3-210ENST00000561817 KIF3BO15066 747 aa9.32□□□□□ -0.92
CAPN3-210ENST00000561817 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
CAPN3-210ENST00000561817 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 EFCAB6Q5THR3 1501 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 RIMS1Q86UR5 1692 aaKnown RBP9.31□□□□□ -0.92
CAPN3-210ENST00000561817 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 CCDC144AA2RUR9 1427 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
CAPN3-210ENST00000561817 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-210ENST00000561817 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms