RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 GGCXP38435 758 aa11.03□□□□□ -0.64
PTPN9-202ENST00000561731 HIC1Q14526 733 aa11.03□□□□□ -0.64
PTPN9-202ENST00000561731 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
PTPN9-202ENST00000561731 PRKD2Q9BZL6 878 aa11.03□□□□□ -0.64
PTPN9-202ENST00000561731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
PTPN9-202ENST00000561731 ZPR1O75312 459 aa11.02□□□□□ -0.65
PTPN9-202ENST00000561731 OATP04181 439 aa11.02□□□□□ -0.65
PTPN9-202ENST00000561731 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
PTPN9-202ENST00000561731 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
PTPN9-202ENST00000561731 LAPTM4AQ15012 233 aa11.01□□□□□ -0.65
PTPN9-202ENST00000561731 RBM26Q5T8P6 1007 aaKnown RBP11.01□□□□□ -0.65
PTPN9-202ENST00000561731 Q6ZNB5 142 aa11□□□□□ -0.65
PTPN9-202ENST00000561731 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
PTPN9-202ENST00000561731 CFHP08603 1231 aa10.99□□□□□ -0.65
PTPN9-202ENST00000561731 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
PTPN9-202ENST00000561731 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
PTPN9-202ENST00000561731 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
PTPN9-202ENST00000561731 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
PTPN9-202ENST00000561731 GNPATO15228 680 aa10.96□□□□□ -0.65
PTPN9-202ENST00000561731 GFRA3O60609 400 aa10.95□□□□□ -0.66
PTPN9-202ENST00000561731 METTL3Q86U44 580 aaKnown RBP10.95□□□□□ -0.66
PTPN9-202ENST00000561731 SLC10A3P09131 477 aa10.94□□□□□ -0.66
PTPN9-202ENST00000561731 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
PTPN9-202ENST00000561731 GPR37O15354 613 aa10.92□□□□□ -0.66
PTPN9-202ENST00000561731 TLL1O43897 1013 aa10.91□□□□□ -0.66
PTPN9-202ENST00000561731 FECHP22830 423 aa10.91□□□□□ -0.66
PTPN9-202ENST00000561731 NR1I2O75469 434 aa10.9□□□□□ -0.66
PTPN9-202ENST00000561731 NRG2O14511 850 aaPredicted RBP10.89□□□□□ -0.67
PTPN9-202ENST00000561731 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
PTPN9-202ENST00000561731 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
PTPN9-202ENST00000561731 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
PTPN9-202ENST00000561731 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
PTPN9-202ENST00000561731 ADH1BP00325 375 aa10.86□□□□□ -0.67
PTPN9-202ENST00000561731 S1PR4O95977 384 aa10.85□□□□□ -0.67
PTPN9-202ENST00000561731 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
PTPN9-202ENST00000561731 RDH13Q8NBN7 331 aa10.85□□□□□ -0.67
PTPN9-202ENST00000561731 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
PTPN9-202ENST00000561731 SLC19A1P41440 591 aa10.84□□□□□ -0.67
PTPN9-202ENST00000561731 TRAF7Q6Q0C0 670 aa10.83□□□□□ -0.68
PTPN9-202ENST00000561731 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
PTPN9-202ENST00000561731 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
PTPN9-202ENST00000561731 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
PTPN9-202ENST00000561731 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
PTPN9-202ENST00000561731 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
PTPN9-202ENST00000561731 SLC6A16Q9GZN6 736 aa10.82□□□□□ -0.68
PTPN9-202ENST00000561731 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
PTPN9-202ENST00000561731 NLRP7Q8WX94 980 aa10.81□□□□□ -0.68
PTPN9-202ENST00000561731 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
PTPN9-202ENST00000561731 LCE2BO14633 110 aa10.78□□□□□ -0.68
PTPN9-202ENST00000561731 SPRYD7Q5W111 196 aa10.78□□□□□ -0.68
PTPN9-202ENST00000561731 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
PTPN9-202ENST00000561731 PHOX2BQ99453 314 aa10.78□□□□□ -0.68
PTPN9-202ENST00000561731 SPSB2Q99619 263 aa10.78□□□□□ -0.68
PTPN9-202ENST00000561731 ATP6V1AP38606 617 aa10.77□□□□□ -0.69
PTPN9-202ENST00000561731 FUT2Q10981 343 aa10.77□□□□□ -0.69
PTPN9-202ENST00000561731 GCGRP47871 477 aa10.76□□□□□ -0.69
PTPN9-202ENST00000561731 MORN1Q5T089 497 aa10.76□□□□□ -0.69
PTPN9-202ENST00000561731 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
PTPN9-202ENST00000561731 LIAT1Q6ZQX7 453 aa10.75□□□□□ -0.69
PTPN9-202ENST00000561731 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
PTPN9-202ENST00000561731 ZNF697Q5TEC3 545 aa10.73□□□□□ -0.69
PTPN9-202ENST00000561731 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
PTPN9-202ENST00000561731 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
PTPN9-202ENST00000561731 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
PTPN9-202ENST00000561731 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
PTPN9-202ENST00000561731 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.69
PTPN9-202ENST00000561731 PRR20EP86478 221 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 PRR20CP86479 221 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 PRR20DP86480 221 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 PRR20BP86481 221 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 PRR20AP86496 221 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 PLA2G2CQ5R387 149 aa10.7□□□□□ -0.7
PTPN9-202ENST00000561731 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
PTPN9-202ENST00000561731 IRF6O14896 467 aa10.68□□□□□ -0.7
PTPN9-202ENST00000561731 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
PTPN9-202ENST00000561731 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
PTPN9-202ENST00000561731 CD46P15529 392 aa10.67□□□□□ -0.7
PTPN9-202ENST00000561731 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
PTPN9-202ENST00000561731 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
PTPN9-202ENST00000561731 GDF9O60383 454 aa10.65□□□□□ -0.7
PTPN9-202ENST00000561731 DGAT1O75907 488 aa10.65□□□□□ -0.7
PTPN9-202ENST00000561731 RPIAP49247 311 aa10.65□□□□□ -0.7
PTPN9-202ENST00000561731 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
PTPN9-202ENST00000561731 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
PTPN9-202ENST00000561731 MDM2Q00987 491 aaPredicted RBP10.64□□□□□ -0.71
PTPN9-202ENST00000561731 Q3C1V9 767 aa10.63□□□□□ -0.71
PTPN9-202ENST00000561731 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
PTPN9-202ENST00000561731 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
PTPN9-202ENST00000561731 CCDC102AQ96A19 550 aa10.63□□□□□ -0.71
PTPN9-202ENST00000561731 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
PTPN9-202ENST00000561731 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
PTPN9-202ENST00000561731 KDM4AO75164 1064 aa10.62□□□□□ -0.71
PTPN9-202ENST00000561731 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
PTPN9-202ENST00000561731 ZNF787Q6DD87 383 aa10.61□□□□□ -0.71
PTPN9-202ENST00000561731 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
PTPN9-202ENST00000561731 USP46P62068 366 aa10.6□□□□□ -0.71
PTPN9-202ENST00000561731 MYT1Q01538 1121 aa10.6□□□□□ -0.71
PTPN9-202ENST00000561731 FOXC1Q12948 553 aa10.6□□□□□ -0.71
PTPN9-202ENST00000561731 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
PTPN9-202ENST00000561731 CLCN1P35523 988 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms