RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ADGRF5Q8IZF2 1346 aa19.51■□□□□ 0.71
CRTC3-210ENST00000560927 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
CRTC3-210ENST00000560927 SYNMO15061 1565 aa19.5■□□□□ 0.71
CRTC3-210ENST00000560927 ZNF518AQ6AHZ1 1483 aa19.5■□□□□ 0.71
CRTC3-210ENST00000560927 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
CRTC3-210ENST00000560927 NEURL4Q96JN8 1562 aa19.49■□□□□ 0.71
CRTC3-210ENST00000560927 CDCA8Q53HL2 280 aa19.49■□□□□ 0.71
CRTC3-210ENST00000560927 INSRP06213 1382 aa19.48■□□□□ 0.71
CRTC3-210ENST00000560927 PPP2R1AP30153 589 aa19.48■□□□□ 0.71
CRTC3-210ENST00000560927 MAP3K4Q9Y6R4 1608 aa19.48■□□□□ 0.71
CRTC3-210ENST00000560927 ZMYM4Q5VZL5 1548 aa19.48■□□□□ 0.71
CRTC3-210ENST00000560927 KIAA1210Q9ULL0 1709 aa19.48■□□□□ 0.71
CRTC3-210ENST00000560927 EIF3AQ14152 1382 aaKnown RBP19.48■□□□□ 0.71
CRTC3-210ENST00000560927 ABCA6Q8N139 1617 aa19.47■□□□□ 0.71
CRTC3-210ENST00000560927 MYOM1P52179 1685 aa19.47■□□□□ 0.71
CRTC3-210ENST00000560927 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
CRTC3-210ENST00000560927 MYOM2P54296 1465 aa19.47■□□□□ 0.71
CRTC3-210ENST00000560927 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
CRTC3-210ENST00000560927 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
CRTC3-210ENST00000560927 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
CRTC3-210ENST00000560927 KIF1BO60333 1816 aa19.45■□□□□ 0.7
CRTC3-210ENST00000560927 CD109Q6YHK3 1445 aa19.44■□□□□ 0.7
CRTC3-210ENST00000560927 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
CRTC3-210ENST00000560927 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
CRTC3-210ENST00000560927 ASXL1Q8IXJ9 1541 aa19.44■□□□□ 0.7
CRTC3-210ENST00000560927 IFT172Q9UG01 1749 aa19.43■□□□□ 0.7
CRTC3-210ENST00000560927 POGZQ7Z3K3 1410 aa19.42■□□□□ 0.7
CRTC3-210ENST00000560927 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
CRTC3-210ENST00000560927 ERVK-7P63135 1459 aa19.42■□□□□ 0.7
CRTC3-210ENST00000560927 KDM5AP29375 1690 aaKnown RBP19.41■□□□□ 0.7
CRTC3-210ENST00000560927 GGT6Q6P531 493 aa19.41■□□□□ 0.7
CRTC3-210ENST00000560927 NRXN1Q9ULB1 1477 aa19.4■□□□□ 0.7
CRTC3-210ENST00000560927 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
CRTC3-210ENST00000560927 NPATQ14207 1427 aa19.4■□□□□ 0.7
CRTC3-210ENST00000560927 NOS1P29475 1434 aa19.4■□□□□ 0.7
CRTC3-210ENST00000560927 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
CRTC3-210ENST00000560927 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
CRTC3-210ENST00000560927 PLIN1O60240 522 aa19.38■□□□□ 0.69
CRTC3-210ENST00000560927 MLH3Q9UHC1 1453 aa19.38■□□□□ 0.69
CRTC3-210ENST00000560927 PLEKHH1Q9ULM0 1364 aa19.37■□□□□ 0.69
CRTC3-210ENST00000560927 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
CRTC3-210ENST00000560927 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
CRTC3-210ENST00000560927 PIK3C2GO75747 1445 aa19.36■□□□□ 0.69
CRTC3-210ENST00000560927 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
CRTC3-210ENST00000560927 CFAP74Q9C0B2 1584 aa19.36■□□□□ 0.69
CRTC3-210ENST00000560927 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
CRTC3-210ENST00000560927 RAPGEF3O95398 923 aa19.33■□□□□ 0.69
CRTC3-210ENST00000560927 MYO3AQ8NEV4 1616 aa19.32■□□□□ 0.68
CRTC3-210ENST00000560927 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
CRTC3-210ENST00000560927 TRAK1Q9UPV9 953 aa19.32■□□□□ 0.68
CRTC3-210ENST00000560927 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
CRTC3-210ENST00000560927 CENPJQ9HC77 1338 aaPredicted RBP19.31■□□□□ 0.68
CRTC3-210ENST00000560927 ABCC3O15438 1527 aa19.31■□□□□ 0.68
CRTC3-210ENST00000560927 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
CRTC3-210ENST00000560927 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
CRTC3-210ENST00000560927 PPLO60437 1756 aa19.3■□□□□ 0.68
CRTC3-210ENST00000560927 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
CRTC3-210ENST00000560927 DUSP27Q5VZP5 1158 aa19.3■□□□□ 0.68
CRTC3-210ENST00000560927 TMEM132EQ6IEE7 984 aa19.3■□□□□ 0.68
CRTC3-210ENST00000560927 C14orf93Q9H972 538 aaKnown RBP19.29■□□□□ 0.68
CRTC3-210ENST00000560927 CRBNQ96SW2 442 aa19.29■□□□□ 0.68
CRTC3-210ENST00000560927 ADGRB1O14514 1584 aa19.28■□□□□ 0.68
CRTC3-210ENST00000560927 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
CRTC3-210ENST00000560927 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
CRTC3-210ENST00000560927 SIGLEC1Q9BZZ2 1709 aa19.26■□□□□ 0.67
CRTC3-210ENST00000560927 GOLGA2Q08379 1002 aa19.26■□□□□ 0.67
CRTC3-210ENST00000560927 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
CRTC3-210ENST00000560927 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
CRTC3-210ENST00000560927 NEO1Q92859 1461 aa19.25■□□□□ 0.67
CRTC3-210ENST00000560927 APAF1O14727 1248 aa19.24■□□□□ 0.67
CRTC3-210ENST00000560927 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
CRTC3-210ENST00000560927 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
CRTC3-210ENST00000560927 RPGRIP1LQ68CZ1 1315 aa19.23■□□□□ 0.67
CRTC3-210ENST00000560927 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
CRTC3-210ENST00000560927 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
CRTC3-210ENST00000560927 ZC3H13Q5T200 1668 aaKnown RBP19.23■□□□□ 0.67
CRTC3-210ENST00000560927 SLFN5Q08AF3 891 aa19.23■□□□□ 0.67
CRTC3-210ENST00000560927 NSD3Q9BZ95 1437 aa19.22■□□□□ 0.67
CRTC3-210ENST00000560927 PIK3C2BO00750 1634 aa19.2■□□□□ 0.66
CRTC3-210ENST00000560927 TCERG1O14776 1098 aaKnown RBP19.19■□□□□ 0.66
CRTC3-210ENST00000560927 TRMT2AQ8IZ69 625 aaKnown RBP19.19■□□□□ 0.66
CRTC3-210ENST00000560927 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
CRTC3-210ENST00000560927 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
CRTC3-210ENST00000560927 NEXMIFQ5QGS0 1516 aa19.18■□□□□ 0.66
CRTC3-210ENST00000560927 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
CRTC3-210ENST00000560927 GLI2P10070 1586 aa19.17■□□□□ 0.66
CRTC3-210ENST00000560927 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
CRTC3-210ENST00000560927 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
CRTC3-210ENST00000560927 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
CRTC3-210ENST00000560927 IDI1Q13907 227 aa19.17■□□□□ 0.66
CRTC3-210ENST00000560927 MORC1Q86VD1 984 aa19.17■□□□□ 0.66
CRTC3-210ENST00000560927 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
CRTC3-210ENST00000560927 RICTORQ6R327 1708 aa19.16■□□□□ 0.66
CRTC3-210ENST00000560927 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
CRTC3-210ENST00000560927 VGFO15240 615 aaPredicted RBP19.16■□□□□ 0.66
CRTC3-210ENST00000560927 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
CRTC3-210ENST00000560927 PDE4AP27815 886 aa19.14■□□□□ 0.65
CRTC3-210ENST00000560927 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
CRTC3-210ENST00000560927 IPO9Q96P70 1041 aaKnown RBP19.13■□□□□ 0.65
CRTC3-210ENST00000560927 TULP4Q9NRJ4 1543 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms