RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
ACTC1-203ENST00000560563 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
ACTC1-203ENST00000560563 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
ACTC1-203ENST00000560563 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
ACTC1-203ENST00000560563 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
ACTC1-203ENST00000560563 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
ACTC1-203ENST00000560563 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
ACTC1-203ENST00000560563 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.42
ACTC1-203ENST00000560563 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 HRCP23327 699 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
ACTC1-203ENST00000560563 RAB3GAP2Q9H2M9 1393 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 A2MP01023 1474 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
ACTC1-203ENST00000560563 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
ACTC1-203ENST00000560563 ATP10AO60312 1499 aa12.37□□□□□ -0.43
ACTC1-203ENST00000560563 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
ACTC1-203ENST00000560563 ARHGEF40Q8TER5 1519 aa12.36□□□□□ -0.43
ACTC1-203ENST00000560563 IER5LQ5T953 404 aa12.35□□□□□ -0.43
ACTC1-203ENST00000560563 ACIN1Q9UKV3 1341 aaKnown RBP12.35□□□□□ -0.43
ACTC1-203ENST00000560563 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
ACTC1-203ENST00000560563 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
ACTC1-203ENST00000560563 KIF3BO15066 747 aa12.33□□□□□ -0.44
ACTC1-203ENST00000560563 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
ACTC1-203ENST00000560563 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
ACTC1-203ENST00000560563 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
ACTC1-203ENST00000560563 TRIM52Q96A61 297 aa12.31□□□□□ -0.44
ACTC1-203ENST00000560563 AGLP35573 1532 aa12.31□□□□□ -0.44
ACTC1-203ENST00000560563 PLCG2P16885 1265 aa12.3□□□□□ -0.44
ACTC1-203ENST00000560563 NUP155O75694 1391 aa12.29□□□□□ -0.44
ACTC1-203ENST00000560563 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
ACTC1-203ENST00000560563 UNC13BO14795 1591 aa12.28□□□□□ -0.44
ACTC1-203ENST00000560563 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
ACTC1-203ENST00000560563 PSEN1P49768 467 aa12.27□□□□□ -0.45
ACTC1-203ENST00000560563 GGT6Q6P531 493 aa12.27□□□□□ -0.45
ACTC1-203ENST00000560563 SIGLEC1Q9BZZ2 1709 aa12.27□□□□□ -0.45
ACTC1-203ENST00000560563 KDM5DQ9BY66 1539 aa12.27□□□□□ -0.45
ACTC1-203ENST00000560563 MROH1Q8NDA8 1641 aa12.26□□□□□ -0.45
ACTC1-203ENST00000560563 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
ACTC1-203ENST00000560563 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
ACTC1-203ENST00000560563 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
ACTC1-203ENST00000560563 PRDM15P57071 1507 aaPredicted RBP12.26□□□□□ -0.45
ACTC1-203ENST00000560563 MPHOSPH9Q99550 1183 aa12.25□□□□□ -0.45
ACTC1-203ENST00000560563 KANK1Q14678 1352 aa12.25□□□□□ -0.45
ACTC1-203ENST00000560563 DHX57Q6P158 1386 aaKnown RBP12.25□□□□□ -0.45
ACTC1-203ENST00000560563 PZPP20742 1482 aa12.25□□□□□ -0.45
ACTC1-203ENST00000560563 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
ACTC1-203ENST00000560563 MLECQ14165 292 aa12.24□□□□□ -0.45
ACTC1-203ENST00000560563 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
ACTC1-203ENST00000560563 IQGAP3Q86VI3 1631 aa12.23□□□□□ -0.45
ACTC1-203ENST00000560563 FAM135AQ9P2D6 1515 aa12.23□□□□□ -0.45
ACTC1-203ENST00000560563 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
ACTC1-203ENST00000560563 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
ACTC1-203ENST00000560563 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
ACTC1-203ENST00000560563 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
ACTC1-203ENST00000560563 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
ACTC1-203ENST00000560563 PKD2Q13563 968 aa12.2□□□□□ -0.46
ACTC1-203ENST00000560563 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
ACTC1-203ENST00000560563 ABCC3O15438 1527 aa12.2□□□□□ -0.46
ACTC1-203ENST00000560563 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
ACTC1-203ENST00000560563 TET3O43151 1660 aa12.17□□□□□ -0.46
ACTC1-203ENST00000560563 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
ACTC1-203ENST00000560563 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
ACTC1-203ENST00000560563 CEP152O94986 1710 aa12.17□□□□□ -0.46
ACTC1-203ENST00000560563 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
ACTC1-203ENST00000560563 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
ACTC1-203ENST00000560563 CNTLNQ9NXG0 1405 aa12.16□□□□□ -0.46
ACTC1-203ENST00000560563 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
ACTC1-203ENST00000560563 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
ACTC1-203ENST00000560563 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.47
ACTC1-203ENST00000560563 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
ACTC1-203ENST00000560563 NPATQ14207 1427 aa12.14□□□□□ -0.47
ACTC1-203ENST00000560563 E9PCH4 1651 aa12.14□□□□□ -0.47
ACTC1-203ENST00000560563 CLTCQ00610 1675 aaKnown RBP12.14□□□□□ -0.47
ACTC1-203ENST00000560563 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
ACTC1-203ENST00000560563 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
ACTC1-203ENST00000560563 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
ACTC1-203ENST00000560563 POTEMA6NI47 508 aa12.13□□□□□ -0.47
ACTC1-203ENST00000560563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
ACTC1-203ENST00000560563 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
ACTC1-203ENST00000560563 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
ACTC1-203ENST00000560563 PTPRTO14522 1441 aa12.11□□□□□ -0.47
ACTC1-203ENST00000560563 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
ACTC1-203ENST00000560563 NOS1P29475 1434 aa12.11□□□□□ -0.47
ACTC1-203ENST00000560563 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
ACTC1-203ENST00000560563 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
ACTC1-203ENST00000560563 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
ACTC1-203ENST00000560563 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
ACTC1-203ENST00000560563 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
ACTC1-203ENST00000560563 PDCD7Q8N8D1 485 aaKnown RBP12.09□□□□□ -0.47
ACTC1-203ENST00000560563 ERVK-7P63135 1459 aa12.08□□□□□ -0.47
ACTC1-203ENST00000560563 TRPM2O94759 1503 aa12.08□□□□□ -0.48
ACTC1-203ENST00000560563 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
ACTC1-203ENST00000560563 CCDC144AA2RUR9 1427 aa12.07□□□□□ -0.48
ACTC1-203ENST00000560563 SPHKAPQ2M3C7 1700 aa12.07□□□□□ -0.48
ACTC1-203ENST00000560563 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
ACTC1-203ENST00000560563 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
ACTC1-203ENST00000560563 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
ACTC1-203ENST00000560563 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms