RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 LMOD2Q6P5Q4 547 aa9.05□□□□□ -0.96
TMOD3-207ENST00000560549 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
TMOD3-207ENST00000560549 RCCD1A6NED2 376 aa9.04□□□□□ -0.96
TMOD3-207ENST00000560549 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
TMOD3-207ENST00000560549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.96
TMOD3-207ENST00000560549 OATP04181 439 aa9.02□□□□□ -0.96
TMOD3-207ENST00000560549 METTL3Q86U44 580 aaKnown RBP9.02□□□□□ -0.96
TMOD3-207ENST00000560549 NLRP7Q8WX94 980 aa9.02□□□□□ -0.96
TMOD3-207ENST00000560549 MTRQ99707 1265 aa9.01□□□□□ -0.97
TMOD3-207ENST00000560549 RNF40O75150 1001 aa9□□□□□ -0.97
TMOD3-207ENST00000560549 IL21Q9HBE4 155 aa9□□□□□ -0.97
TMOD3-207ENST00000560549 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
TMOD3-207ENST00000560549 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
TMOD3-207ENST00000560549 SLC10A3P09131 477 aa8.97□□□□□ -0.97
TMOD3-207ENST00000560549 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
TMOD3-207ENST00000560549 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.97
TMOD3-207ENST00000560549 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
TMOD3-207ENST00000560549 ZNF516Q92618 1163 aa8.96□□□□□ -0.98
TMOD3-207ENST00000560549 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
TMOD3-207ENST00000560549 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
TMOD3-207ENST00000560549 IRF6O14896 467 aa8.93□□□□□ -0.98
TMOD3-207ENST00000560549 ZMYND10O75800 440 aa8.93□□□□□ -0.98
TMOD3-207ENST00000560549 BCANQ96GW7 911 aa8.93□□□□□ -0.98
TMOD3-207ENST00000560549 DAXXQ9UER7 740 aaPredicted RBP8.92□□□□□ -0.98
TMOD3-207ENST00000560549 ZPR1O75312 459 aa8.91□□□□□ -0.98
TMOD3-207ENST00000560549 CFHP08603 1231 aa8.91□□□□□ -0.98
TMOD3-207ENST00000560549 KMT5BQ4FZB7 885 aa8.91□□□□□ -0.98
TMOD3-207ENST00000560549 PCDHB3Q9Y5E6 796 aa8.91□□□□□ -0.98
TMOD3-207ENST00000560549 COPS2P61201 443 aa8.9□□□□□ -0.98
TMOD3-207ENST00000560549 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
TMOD3-207ENST00000560549 MINK1Q8N4C8 1332 aaPredicted RBP8.9□□□□□ -0.98
TMOD3-207ENST00000560549 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
TMOD3-207ENST00000560549 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
TMOD3-207ENST00000560549 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
TMOD3-207ENST00000560549 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
TMOD3-207ENST00000560549 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
TMOD3-207ENST00000560549 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
TMOD3-207ENST00000560549 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
TMOD3-207ENST00000560549 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
TMOD3-207ENST00000560549 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
TMOD3-207ENST00000560549 SULF1Q8IWU6 871 aa8.83□□□□□ -1
TMOD3-207ENST00000560549 GCGRP47871 477 aa8.83□□□□□ -1
TMOD3-207ENST00000560549 TLL1O43897 1013 aa8.82□□□□□ -1
TMOD3-207ENST00000560549 NR1I2O75469 434 aa8.82□□□□□ -1
TMOD3-207ENST00000560549 PRKCSHP14314 528 aaPredicted RBP8.82□□□□□ -1
TMOD3-207ENST00000560549 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
TMOD3-207ENST00000560549 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
TMOD3-207ENST00000560549 RDH13Q8NBN7 331 aa8.81□□□□□ -1
TMOD3-207ENST00000560549 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
TMOD3-207ENST00000560549 ADH1BP00325 375 aa8.8□□□□□ -1
TMOD3-207ENST00000560549 CD46P15529 392 aa8.8□□□□□ -1
TMOD3-207ENST00000560549 GGCXP38435 758 aa8.8□□□□□ -1
TMOD3-207ENST00000560549 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
TMOD3-207ENST00000560549 MORN1Q5T089 497 aa8.8□□□□□ -1
TMOD3-207ENST00000560549 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
TMOD3-207ENST00000560549 SLC24A3Q9HC58 644 aa8.79□□□□□ -1
TMOD3-207ENST00000560549 RNF223E7ERA6 249 aa8.78□□□□□ -1
TMOD3-207ENST00000560549 FUT2Q10981 343 aa8.78□□□□□ -1
TMOD3-207ENST00000560549 PRKD2Q9BZL6 878 aa8.78□□□□□ -1
TMOD3-207ENST00000560549 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
TMOD3-207ENST00000560549 ATP6V1AP38606 617 aa8.77□□□□□ -1
TMOD3-207ENST00000560549 AMHR2Q16671 573 aa8.77□□□□□ -1
TMOD3-207ENST00000560549 EMID1Q96A84 441 aaPredicted RBP8.77□□□□□ -1
TMOD3-207ENST00000560549 THAP11Q96EK4 314 aa8.77□□□□□ -1
TMOD3-207ENST00000560549 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1
TMOD3-207ENST00000560549 TRIM66O15016 1216 aa8.77□□□□□ -1.01
TMOD3-207ENST00000560549 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
TMOD3-207ENST00000560549 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
TMOD3-207ENST00000560549 S1PR4O95977 384 aa8.75□□□□□ -1.01
TMOD3-207ENST00000560549 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
TMOD3-207ENST00000560549 HLA-CQ95604 372 aa8.75□□□□□ -1.01
TMOD3-207ENST00000560549 CLCN1P35523 988 aa8.74□□□□□ -1.01
TMOD3-207ENST00000560549 SLC27A5Q9Y2P5 690 aa8.74□□□□□ -1.01
TMOD3-207ENST00000560549 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
TMOD3-207ENST00000560549 SPSB2Q99619 263 aa8.73□□□□□ -1.01
TMOD3-207ENST00000560549 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
TMOD3-207ENST00000560549 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
TMOD3-207ENST00000560549 AK7Q96M32 723 aa8.72□□□□□ -1.01
TMOD3-207ENST00000560549 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
TMOD3-207ENST00000560549 LAPTM4AQ15012 233 aa8.71□□□□□ -1.01
TMOD3-207ENST00000560549 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
TMOD3-207ENST00000560549 MS4A1P11836 297 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
TMOD3-207ENST00000560549 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
TMOD3-207ENST00000560549 KDM4AO75164 1064 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 USP46P62068 366 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 GRIPAP1Q4V328 841 aa8.7□□□□□ -1.02
TMOD3-207ENST00000560549 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
TMOD3-207ENST00000560549 PDE4DQ08499 809 aa8.69□□□□□ -1.02
TMOD3-207ENST00000560549 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
TMOD3-207ENST00000560549 SLC19A1P41440 591 aa8.68□□□□□ -1.02
TMOD3-207ENST00000560549 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
TMOD3-207ENST00000560549 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
TMOD3-207ENST00000560549 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
TMOD3-207ENST00000560549 HOXA2O43364 376 aa8.67□□□□□ -1.02
TMOD3-207ENST00000560549 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
TMOD3-207ENST00000560549 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
TMOD3-207ENST00000560549 NRG2O14511 850 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms