RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 METTL3Q86U44 580 aaKnown RBP9.47□□□□□ -0.89
SPG11-218ENST00000559754 PRR14Q9BWN1 585 aa9.47□□□□□ -0.89
SPG11-218ENST00000559754 KCNC4Q03721 635 aa9.45□□□□□ -0.9
SPG11-218ENST00000559754 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
SPG11-218ENST00000559754 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
SPG11-218ENST00000559754 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
SPG11-218ENST00000559754 APLP1P51693 650 aa9.42□□□□□ -0.9
SPG11-218ENST00000559754 SLC24A1O60721 1099 aa9.41□□□□□ -0.9
SPG11-218ENST00000559754 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
SPG11-218ENST00000559754 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
SPG11-218ENST00000559754 A0A0G2JS52 829 aa9.4□□□□□ -0.9
SPG11-218ENST00000559754 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
SPG11-218ENST00000559754 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.9
SPG11-218ENST00000559754 MTRQ99707 1265 aa9.39□□□□□ -0.91
SPG11-218ENST00000559754 IRF6O14896 467 aa9.38□□□□□ -0.91
SPG11-218ENST00000559754 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
SPG11-218ENST00000559754 RGS20O76081 388 aa9.37□□□□□ -0.91
SPG11-218ENST00000559754 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
SPG11-218ENST00000559754 CFHP08603 1231 aa9.36□□□□□ -0.91
SPG11-218ENST00000559754 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
SPG11-218ENST00000559754 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
SPG11-218ENST00000559754 SLC10A3P09131 477 aa9.35□□□□□ -0.91
SPG11-218ENST00000559754 PHOX2BQ99453 314 aa9.34□□□□□ -0.91
SPG11-218ENST00000559754 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
SPG11-218ENST00000559754 COPS2P61201 443 aa9.33□□□□□ -0.92
SPG11-218ENST00000559754 KRI1Q8N9T8 703 aaKnown RBP9.33□□□□□ -0.92
SPG11-218ENST00000559754 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
SPG11-218ENST00000559754 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
SPG11-218ENST00000559754 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
SPG11-218ENST00000559754 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
SPG11-218ENST00000559754 ZMYND10O75800 440 aa9.31□□□□□ -0.92
SPG11-218ENST00000559754 BARGINQ6ZT62 677 aa9.31□□□□□ -0.92
SPG11-218ENST00000559754 ZPR1O75312 459 aa9.3□□□□□ -0.92
SPG11-218ENST00000559754 ZNF516Q92618 1163 aa9.3□□□□□ -0.92
SPG11-218ENST00000559754 BLOC1S3Q6QNY0 202 aa9.29□□□□□ -0.92
SPG11-218ENST00000559754 NR1I2O75469 434 aa9.28□□□□□ -0.92
SPG11-218ENST00000559754 CLCN1P35523 988 aa9.28□□□□□ -0.92
SPG11-218ENST00000559754 GGCXP38435 758 aa9.28□□□□□ -0.92
SPG11-218ENST00000559754 BCANQ96GW7 911 aa9.28□□□□□ -0.92
SPG11-218ENST00000559754 GCGRP47871 477 aa9.27□□□□□ -0.93
SPG11-218ENST00000559754 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
SPG11-218ENST00000559754 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
SPG11-218ENST00000559754 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
SPG11-218ENST00000559754 CD46P15529 392 aa9.24□□□□□ -0.93
SPG11-218ENST00000559754 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
SPG11-218ENST00000559754 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
SPG11-218ENST00000559754 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
SPG11-218ENST00000559754 FUT2Q10981 343 aa9.23□□□□□ -0.93
SPG11-218ENST00000559754 NKX2-3Q8TAU0 364 aa9.23□□□□□ -0.93
SPG11-218ENST00000559754 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
SPG11-218ENST00000559754 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
SPG11-218ENST00000559754 AMHR2Q16671 573 aa9.21□□□□□ -0.94
SPG11-218ENST00000559754 MORN1Q5T089 497 aa9.21□□□□□ -0.94
SPG11-218ENST00000559754 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
SPG11-218ENST00000559754 ADH1BP00325 375 aa9.2□□□□□ -0.94
SPG11-218ENST00000559754 FAM217BQ9NTX9 383 aaPredicted RBP9.2□□□□□ -0.94
SPG11-218ENST00000559754 TLL1O43897 1013 aa9.19□□□□□ -0.94
SPG11-218ENST00000559754 KDM4AO75164 1064 aa9.19□□□□□ -0.94
SPG11-218ENST00000559754 USP46P62068 366 aa9.19□□□□□ -0.94
SPG11-218ENST00000559754 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
SPG11-218ENST00000559754 AK7Q96M32 723 aa9.19□□□□□ -0.94
SPG11-218ENST00000559754 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
SPG11-218ENST00000559754 SPSB2Q99619 263 aa9.17□□□□□ -0.94
SPG11-218ENST00000559754 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
SPG11-218ENST00000559754 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
SPG11-218ENST00000559754 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
SPG11-218ENST00000559754 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
SPG11-218ENST00000559754 Q3C1V9 767 aa9.15□□□□□ -0.94
SPG11-218ENST00000559754 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
SPG11-218ENST00000559754 PRKD2Q9BZL6 878 aa9.15□□□□□ -0.94
SPG11-218ENST00000559754 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
SPG11-218ENST00000559754 TRIM66O15016 1216 aa9.14□□□□□ -0.95
SPG11-218ENST00000559754 S1PR4O95977 384 aa9.14□□□□□ -0.95
SPG11-218ENST00000559754 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
SPG11-218ENST00000559754 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
SPG11-218ENST00000559754 ANKLE1Q8NAG6 615 aa9.13□□□□□ -0.95
SPG11-218ENST00000559754 THAP11Q96EK4 314 aa9.13□□□□□ -0.95
SPG11-218ENST00000559754 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
SPG11-218ENST00000559754 GIGYF2Q6Y7W6 1299 aaKnown RBP9.12□□□□□ -0.95
SPG11-218ENST00000559754 HOXA2O43364 376 aa9.11□□□□□ -0.95
SPG11-218ENST00000559754 BRICD5Q6PL45 260 aa9.11□□□□□ -0.95
SPG11-218ENST00000559754 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
SPG11-218ENST00000559754 PARP9Q8IXQ6 854 aa9.1□□□□□ -0.95
SPG11-218ENST00000559754 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
SPG11-218ENST00000559754 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
SPG11-218ENST00000559754 PDE4DQ08499 809 aa9.08□□□□□ -0.96
SPG11-218ENST00000559754 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
SPG11-218ENST00000559754 SLC19A1P41440 591 aa9.07□□□□□ -0.96
SPG11-218ENST00000559754 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
SPG11-218ENST00000559754 RNF19BQ6ZMZ0 732 aa9.07□□□□□ -0.96
SPG11-218ENST00000559754 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
SPG11-218ENST00000559754 BEGAINQ9BUH8 593 aa9.07□□□□□ -0.96
SPG11-218ENST00000559754 SPIRE2Q8WWL2 714 aa9.06□□□□□ -0.96
SPG11-218ENST00000559754 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
SPG11-218ENST00000559754 FDX1P10109 184 aa9.04□□□□□ -0.96
SPG11-218ENST00000559754 HLA-CQ95604 372 aa9.04□□□□□ -0.96
SPG11-218ENST00000559754 MS4A1P11836 297 aa9.03□□□□□ -0.96
SPG11-218ENST00000559754 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
SPG11-218ENST00000559754 GUCA2AQ02747 115 aa9.02□□□□□ -0.97
SPG11-218ENST00000559754 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 378.4 ms