RNA–Protein interactions for RNA: ENST00000559469.5

LRRC49-217, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,204 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-217ENST00000559469 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
LRRC49-217ENST00000559469 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
LRRC49-217ENST00000559469 CLIP1P30622 1438 aa10.82□□□□□ -0.68
LRRC49-217ENST00000559469 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
LRRC49-217ENST00000559469 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
LRRC49-217ENST00000559469 LHX6Q9UPM6 363 aa10.81□□□□□ -0.68
LRRC49-217ENST00000559469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.8□□□□□ -0.68
LRRC49-217ENST00000559469 ARAP3Q8WWN8 1544 aa10.8□□□□□ -0.68
LRRC49-217ENST00000559469 PLEKHD1A6NEE1 506 aa10.8□□□□□ -0.68
LRRC49-217ENST00000559469 CASKIN1Q8WXD9 1431 aa10.8□□□□□ -0.68
LRRC49-217ENST00000559469 NEO1Q92859 1461 aa10.8□□□□□ -0.68
LRRC49-217ENST00000559469 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
LRRC49-217ENST00000559469 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
LRRC49-217ENST00000559469 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
LRRC49-217ENST00000559469 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
LRRC49-217ENST00000559469 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
LRRC49-217ENST00000559469 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.69
LRRC49-217ENST00000559469 TROQ12816 1431 aaPredicted RBP10.76□□□□□ -0.69
LRRC49-217ENST00000559469 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
LRRC49-217ENST00000559469 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
LRRC49-217ENST00000559469 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
LRRC49-217ENST00000559469 TBC1D12O60347 775 aa10.75□□□□□ -0.69
LRRC49-217ENST00000559469 PLCB2Q00722 1185 aa10.75□□□□□ -0.69
LRRC49-217ENST00000559469 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
LRRC49-217ENST00000559469 FANCAO15360 1455 aa10.74□□□□□ -0.69
LRRC49-217ENST00000559469 FRMPD1Q5SYB0 1578 aa10.74□□□□□ -0.69
LRRC49-217ENST00000559469 CFAP74Q9C0B2 1584 aa10.74□□□□□ -0.69
LRRC49-217ENST00000559469 KIF14Q15058 1648 aa10.74□□□□□ -0.69
LRRC49-217ENST00000559469 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
LRRC49-217ENST00000559469 CDK11AQ9UQ88 783 aaPredicted RBP10.74□□□□□ -0.69
LRRC49-217ENST00000559469 PLCH2O75038 1416 aa10.73□□□□□ -0.69
LRRC49-217ENST00000559469 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
LRRC49-217ENST00000559469 AKNAQ7Z591 1439 aa10.72□□□□□ -0.69
LRRC49-217ENST00000559469 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
LRRC49-217ENST00000559469 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.69
LRRC49-217ENST00000559469 ANO8Q9HCE9 1232 aaPredicted RBP10.71□□□□□ -0.69
LRRC49-217ENST00000559469 EVI5O60447 810 aa10.7□□□□□ -0.7
LRRC49-217ENST00000559469 RAPGEF3O95398 923 aa10.7□□□□□ -0.7
LRRC49-217ENST00000559469 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
LRRC49-217ENST00000559469 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
LRRC49-217ENST00000559469 ARHGEF40Q8TER5 1519 aa10.68□□□□□ -0.7
LRRC49-217ENST00000559469 POGZQ7Z3K3 1410 aa10.68□□□□□ -0.7
LRRC49-217ENST00000559469 RICTORQ6R327 1708 aa10.68□□□□□ -0.7
LRRC49-217ENST00000559469 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
LRRC49-217ENST00000559469 DPYSL4O14531 572 aa10.68□□□□□ -0.7
LRRC49-217ENST00000559469 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
LRRC49-217ENST00000559469 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
LRRC49-217ENST00000559469 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
LRRC49-217ENST00000559469 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
LRRC49-217ENST00000559469 EFCAB2Q5VUJ9 269 aa10.66□□□□□ -0.7
LRRC49-217ENST00000559469 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
LRRC49-217ENST00000559469 E2F4Q16254 413 aa10.65□□□□□ -0.7
LRRC49-217ENST00000559469 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
LRRC49-217ENST00000559469 MAGI2Q86UL8 1455 aa10.64□□□□□ -0.71
LRRC49-217ENST00000559469 SPNS2Q8IVW8 549 aa10.64□□□□□ -0.71
LRRC49-217ENST00000559469 YEATS2Q9ULM3 1422 aa10.64□□□□□ -0.71
LRRC49-217ENST00000559469 ABCC1P33527 1531 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 ZNF518AQ6AHZ1 1483 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 VPS8Q8N3P4 1428 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
LRRC49-217ENST00000559469 KDM5CP41229 1560 aa10.62□□□□□ -0.71
LRRC49-217ENST00000559469 FOSBP53539 338 aa10.62□□□□□ -0.71
LRRC49-217ENST00000559469 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
LRRC49-217ENST00000559469 CDC42BPBQ9Y5S2 1711 aa10.61□□□□□ -0.71
LRRC49-217ENST00000559469 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
LRRC49-217ENST00000559469 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
LRRC49-217ENST00000559469 PSDA5PKW4 1024 aaPredicted RBP10.6□□□□□ -0.71
LRRC49-217ENST00000559469 CDC42BPAQ5VT25 1732 aa10.6□□□□□ -0.71
LRRC49-217ENST00000559469 PSEN2P49810 448 aa10.59□□□□□ -0.71
LRRC49-217ENST00000559469 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
LRRC49-217ENST00000559469 TRAPPC8Q9Y2L5 1435 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 ADAMTSL3P82987 1691 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 SAMD9LQ8IVG5 1584 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 HECW2Q9P2P5 1572 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 CCNB3Q8WWL7 1395 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 ARIH1Q9Y4X5 557 aaPredicted RBP10.58□□□□□ -0.72
LRRC49-217ENST00000559469 PCDHGA10Q9Y5H3 936 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 BCORL1Q5H9F3 1711 aa10.58□□□□□ -0.72
LRRC49-217ENST00000559469 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 MLH3Q9UHC1 1453 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
LRRC49-217ENST00000559469 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 AFAP1Q8N556 730 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 SIGLEC1Q9BZZ2 1709 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 SYCP2Q9BX26 1530 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 C9orf84Q5VXU9 1444 aa10.57□□□□□ -0.72
LRRC49-217ENST00000559469 DIP2CQ9Y2E4 1556 aa10.56□□□□□ -0.72
LRRC49-217ENST00000559469 ATP10AO60312 1499 aa10.56□□□□□ -0.72
LRRC49-217ENST00000559469 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
LRRC49-217ENST00000559469 LSM11P83369 360 aaKnown RBP eCLIP10.56□□□□□ -0.72
LRRC49-217ENST00000559469 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
LRRC49-217ENST00000559469 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
LRRC49-217ENST00000559469 PLEKHH2Q8IVE3 1493 aa10.55□□□□□ -0.72
LRRC49-217ENST00000559469 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
LRRC49-217ENST00000559469 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
LRRC49-217ENST00000559469 PBX2P40425 430 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms