RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
LYSMD2-203ENST00000558126 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
LYSMD2-203ENST00000558126 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
LYSMD2-203ENST00000558126 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
LYSMD2-203ENST00000558126 LTKP29376 864 aa16.42■□□□□ 0.22
LYSMD2-203ENST00000558126 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
LYSMD2-203ENST00000558126 SYNMO15061 1565 aa16.42■□□□□ 0.22
LYSMD2-203ENST00000558126 SLIT1O75093 1534 aa16.41■□□□□ 0.22
LYSMD2-203ENST00000558126 DUOX2Q9NRD8 1548 aa16.41■□□□□ 0.22
LYSMD2-203ENST00000558126 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
LYSMD2-203ENST00000558126 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
LYSMD2-203ENST00000558126 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
LYSMD2-203ENST00000558126 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
LYSMD2-203ENST00000558126 KIF15Q9NS87 1388 aa16.37■□□□□ 0.21
LYSMD2-203ENST00000558126 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
LYSMD2-203ENST00000558126 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
LYSMD2-203ENST00000558126 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
LYSMD2-203ENST00000558126 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
LYSMD2-203ENST00000558126 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
LYSMD2-203ENST00000558126 ABCC5O15440 1437 aa16.34■□□□□ 0.21
LYSMD2-203ENST00000558126 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
LYSMD2-203ENST00000558126 KCNA6P17658 529 aa16.33■□□□□ 0.2
LYSMD2-203ENST00000558126 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
LYSMD2-203ENST00000558126 RGS17Q9UGC6 210 aaPredicted RBP16.33■□□□□ 0.2
LYSMD2-203ENST00000558126 IDI1Q13907 227 aa16.32■□□□□ 0.2
LYSMD2-203ENST00000558126 KANK1Q14678 1352 aa16.32■□□□□ 0.2
LYSMD2-203ENST00000558126 LMTK2Q8IWU2 1503 aa16.31■□□□□ 0.2
LYSMD2-203ENST00000558126 EVX2Q03828 476 aa16.31■□□□□ 0.2
LYSMD2-203ENST00000558126 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
LYSMD2-203ENST00000558126 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
LYSMD2-203ENST00000558126 CEP152O94986 1710 aa16.28■□□□□ 0.2
LYSMD2-203ENST00000558126 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
LYSMD2-203ENST00000558126 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.2
LYSMD2-203ENST00000558126 ANKRD30AQ9BXX3 1397 aa16.27■□□□□ 0.2
LYSMD2-203ENST00000558126 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.2
LYSMD2-203ENST00000558126 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
LYSMD2-203ENST00000558126 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
LYSMD2-203ENST00000558126 NOS1P29475 1434 aa16.27■□□□□ 0.19
LYSMD2-203ENST00000558126 DAPK1P53355 1430 aa16.27■□□□□ 0.19
LYSMD2-203ENST00000558126 EFCAB6Q5THR3 1501 aa16.26■□□□□ 0.19
LYSMD2-203ENST00000558126 TET3O43151 1660 aa16.25■□□□□ 0.19
LYSMD2-203ENST00000558126 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
LYSMD2-203ENST00000558126 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
LYSMD2-203ENST00000558126 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
LYSMD2-203ENST00000558126 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
LYSMD2-203ENST00000558126 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
LYSMD2-203ENST00000558126 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-203ENST00000558126 HDGFP51858 240 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-203ENST00000558126 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
LYSMD2-203ENST00000558126 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-203ENST00000558126 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
LYSMD2-203ENST00000558126 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
LYSMD2-203ENST00000558126 CROCC2H7BZ55 1655 aa16.2■□□□□ 0.18
LYSMD2-203ENST00000558126 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
LYSMD2-203ENST00000558126 MSH6P52701 1360 aa16.19■□□□□ 0.18
LYSMD2-203ENST00000558126 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
LYSMD2-203ENST00000558126 NWD1Q149M9 1564 aa16.18■□□□□ 0.18
LYSMD2-203ENST00000558126 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
LYSMD2-203ENST00000558126 CHIC2Q9UKJ5 165 aa16.18■□□□□ 0.18
LYSMD2-203ENST00000558126 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
LYSMD2-203ENST00000558126 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
LYSMD2-203ENST00000558126 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
LYSMD2-203ENST00000558126 ADGRB3O60242 1522 aa16.17■□□□□ 0.18
LYSMD2-203ENST00000558126 ZFYVE9O95405 1425 aa16.16■□□□□ 0.18
LYSMD2-203ENST00000558126 JCADQ9P266 1359 aa16.15■□□□□ 0.18
LYSMD2-203ENST00000558126 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
LYSMD2-203ENST00000558126 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
LYSMD2-203ENST00000558126 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
LYSMD2-203ENST00000558126 BCANQ96GW7 911 aa16.13■□□□□ 0.17
LYSMD2-203ENST00000558126 ROBO1Q9Y6N7 1651 aa16.13■□□□□ 0.17
LYSMD2-203ENST00000558126 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
LYSMD2-203ENST00000558126 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
LYSMD2-203ENST00000558126 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
LYSMD2-203ENST00000558126 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
LYSMD2-203ENST00000558126 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
LYSMD2-203ENST00000558126 C19orf44Q9H6X5 657 aa16.09■□□□□ 0.17
LYSMD2-203ENST00000558126 ADAMTS13Q76LX8 1427 aa16.06■□□□□ 0.16
LYSMD2-203ENST00000558126 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
LYSMD2-203ENST00000558126 FAM50AQ14320 339 aaKnown RBP16.05■□□□□ 0.16
LYSMD2-203ENST00000558126 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
LYSMD2-203ENST00000558126 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
LYSMD2-203ENST00000558126 ATF3P18847 181 aa16.04■□□□□ 0.16
LYSMD2-203ENST00000558126 ROCK1Q13464 1354 aa16.03■□□□□ 0.16
LYSMD2-203ENST00000558126 GABBR2O75899 941 aa16.03■□□□□ 0.16
LYSMD2-203ENST00000558126 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
LYSMD2-203ENST00000558126 DIP2AQ14689 1571 aa16.02■□□□□ 0.16
LYSMD2-203ENST00000558126 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
LYSMD2-203ENST00000558126 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
LYSMD2-203ENST00000558126 PROM2Q8N271 834 aa16.01■□□□□ 0.15
LYSMD2-203ENST00000558126 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
LYSMD2-203ENST00000558126 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
LYSMD2-203ENST00000558126 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
LYSMD2-203ENST00000558126 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
LYSMD2-203ENST00000558126 DCCP43146 1447 aa16■□□□□ 0.15
LYSMD2-203ENST00000558126 LRP6O75581 1613 aa15.98■□□□□ 0.15
LYSMD2-203ENST00000558126 UNC13BO14795 1591 aa15.98■□□□□ 0.15
LYSMD2-203ENST00000558126 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
LYSMD2-203ENST00000558126 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
LYSMD2-203ENST00000558126 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
LYSMD2-203ENST00000558126 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms