RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
SPG11-205ENST00000558080 PLEKHH2Q8IVE3 1493 aa11.97□□□□□ -0.49
SPG11-205ENST00000558080 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
SPG11-205ENST00000558080 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
SPG11-205ENST00000558080 C3P01024 1663 aa11.97□□□□□ -0.49
SPG11-205ENST00000558080 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.49
SPG11-205ENST00000558080 ZNF644Q9H582 1327 aaPredicted RBP11.96□□□□□ -0.49
SPG11-205ENST00000558080 CEBPAP49715 358 aaPredicted RBP11.96□□□□□ -0.49
SPG11-205ENST00000558080 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
SPG11-205ENST00000558080 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.5
SPG11-205ENST00000558080 AGLP35573 1532 aa11.96□□□□□ -0.5
SPG11-205ENST00000558080 ATP7AQ04656 1500 aa11.96□□□□□ -0.5
SPG11-205ENST00000558080 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
SPG11-205ENST00000558080 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
SPG11-205ENST00000558080 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
SPG11-205ENST00000558080 HSPA2P54652 639 aa11.94□□□□□ -0.5
SPG11-205ENST00000558080 ESF1Q9H501 851 aaKnown RBP11.93□□□□□ -0.5
SPG11-205ENST00000558080 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
SPG11-205ENST00000558080 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
SPG11-205ENST00000558080 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
SPG11-205ENST00000558080 A2MP01023 1474 aa11.9□□□□□ -0.5
SPG11-205ENST00000558080 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
SPG11-205ENST00000558080 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SPG11-205ENST00000558080 MROH2AA6NES4 1674 aa11.9□□□□□ -0.5
SPG11-205ENST00000558080 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
SPG11-205ENST00000558080 PLXNC1O60486 1568 aa11.88□□□□□ -0.51
SPG11-205ENST00000558080 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 GGT6Q6P531 493 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 MARVELD3Q96A59 401 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
SPG11-205ENST00000558080 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
SPG11-205ENST00000558080 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
SPG11-205ENST00000558080 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
SPG11-205ENST00000558080 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
SPG11-205ENST00000558080 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
SPG11-205ENST00000558080 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
SPG11-205ENST00000558080 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
SPG11-205ENST00000558080 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
SPG11-205ENST00000558080 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
SPG11-205ENST00000558080 TSPY4P0CV99 314 aa11.82□□□□□ -0.52
SPG11-205ENST00000558080 TSPY10P0CW01 314 aa11.82□□□□□ -0.52
SPG11-205ENST00000558080 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
SPG11-205ENST00000558080 G3V3G9 751 aa11.81□□□□□ -0.52
SPG11-205ENST00000558080 KIF3BO15066 747 aa11.81□□□□□ -0.52
SPG11-205ENST00000558080 MAST1Q9Y2H9 1570 aa11.79□□□□□ -0.52
SPG11-205ENST00000558080 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
SPG11-205ENST00000558080 MIA2Q96PC5 1412 aa11.79□□□□□ -0.52
SPG11-205ENST00000558080 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
SPG11-205ENST00000558080 EMP3P54852 163 aa11.79□□□□□ -0.52
SPG11-205ENST00000558080 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
SPG11-205ENST00000558080 NPATQ14207 1427 aa11.78□□□□□ -0.52
SPG11-205ENST00000558080 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
SPG11-205ENST00000558080 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
SPG11-205ENST00000558080 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
SPG11-205ENST00000558080 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
SPG11-205ENST00000558080 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
SPG11-205ENST00000558080 CAMSAP1Q5T5Y3 1602 aa11.76□□□□□ -0.53
SPG11-205ENST00000558080 CEP152O94986 1710 aa11.76□□□□□ -0.53
SPG11-205ENST00000558080 WASHC2CQ9Y4E1 1318 aa11.75□□□□□ -0.53
SPG11-205ENST00000558080 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
SPG11-205ENST00000558080 RNF17Q9BXT8 1623 aaKnown RBP11.75□□□□□ -0.53
SPG11-205ENST00000558080 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
SPG11-205ENST00000558080 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
SPG11-205ENST00000558080 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
SPG11-205ENST00000558080 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
SPG11-205ENST00000558080 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
SPG11-205ENST00000558080 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
SPG11-205ENST00000558080 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
SPG11-205ENST00000558080 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
SPG11-205ENST00000558080 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
SPG11-205ENST00000558080 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
SPG11-205ENST00000558080 ABCC5O15440 1437 aa11.72□□□□□ -0.53
SPG11-205ENST00000558080 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
SPG11-205ENST00000558080 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
SPG11-205ENST00000558080 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
SPG11-205ENST00000558080 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.53
SPG11-205ENST00000558080 DUOX2Q9NRD8 1548 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 PTPRTO14522 1441 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
SPG11-205ENST00000558080 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.54
SPG11-205ENST00000558080 MROH1Q8NDA8 1641 aa11.71□□□□□ -0.54
SPG11-205ENST00000558080 PZPP20742 1482 aa11.7□□□□□ -0.54
SPG11-205ENST00000558080 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
SPG11-205ENST00000558080 DAPK1P53355 1430 aa11.7□□□□□ -0.54
SPG11-205ENST00000558080 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
SPG11-205ENST00000558080 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
SPG11-205ENST00000558080 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
SPG11-205ENST00000558080 TNRQ92752 1358 aa11.69□□□□□ -0.54
SPG11-205ENST00000558080 FAM205CA6NFA0 338 aa11.69□□□□□ -0.54
SPG11-205ENST00000558080 ABCC3O15438 1527 aa11.69□□□□□ -0.54
SPG11-205ENST00000558080 KIF15Q9NS87 1388 aa11.68□□□□□ -0.54
SPG11-205ENST00000558080 SOX12O15370 315 aa11.68□□□□□ -0.54
SPG11-205ENST00000558080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
SPG11-205ENST00000558080 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
SPG11-205ENST00000558080 FAM50AQ14320 339 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms