RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 RGS12O14924 1447 aa16.2■□□□□ 0.18
ABCD4-227ENST00000557554 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-227ENST00000557554 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-227ENST00000557554 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
ABCD4-227ENST00000557554 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-227ENST00000557554 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
ABCD4-227ENST00000557554 QTRT2Q9H974 415 aaKnown RBP16.19■□□□□ 0.18
ABCD4-227ENST00000557554 DUOX2Q9NRD8 1548 aa16.18■□□□□ 0.18
ABCD4-227ENST00000557554 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
ABCD4-227ENST00000557554 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
ABCD4-227ENST00000557554 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
ABCD4-227ENST00000557554 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-227ENST00000557554 TBX22Q9Y458 520 aa16.15■□□□□ 0.18
ABCD4-227ENST00000557554 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
ABCD4-227ENST00000557554 NOS1P29475 1434 aa16.14■□□□□ 0.17
ABCD4-227ENST00000557554 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
ABCD4-227ENST00000557554 BCANQ96GW7 911 aa16.14■□□□□ 0.17
ABCD4-227ENST00000557554 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
ABCD4-227ENST00000557554 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
ABCD4-227ENST00000557554 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
ABCD4-227ENST00000557554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.173e-10■■□□□ 13
ABCD4-227ENST00000557554 ATF3P18847 181 aa16.12■□□□□ 0.17
ABCD4-227ENST00000557554 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
ABCD4-227ENST00000557554 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
ABCD4-227ENST00000557554 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
ABCD4-227ENST00000557554 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
ABCD4-227ENST00000557554 C8orf37Q96NL8 207 aa16.1■□□□□ 0.17
ABCD4-227ENST00000557554 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
ABCD4-227ENST00000557554 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
ABCD4-227ENST00000557554 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
ABCD4-227ENST00000557554 ATAD2Q6PL18 1390 aa16.09■□□□□ 0.17
ABCD4-227ENST00000557554 FOXD1Q16676 465 aa16.08■□□□□ 0.16
ABCD4-227ENST00000557554 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
ABCD4-227ENST00000557554 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
ABCD4-227ENST00000557554 EP400Q96L91 3159 aa16.07■□□□□ 0.16
ABCD4-227ENST00000557554 ADAMTS13Q76LX8 1427 aa16.07■□□□□ 0.16
ABCD4-227ENST00000557554 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
ABCD4-227ENST00000557554 KANK1Q14678 1352 aa16.06■□□□□ 0.16
ABCD4-227ENST00000557554 HDGFP51858 240 aaKnown RBP16.06■□□□□ 0.16
ABCD4-227ENST00000557554 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
ABCD4-227ENST00000557554 RIMS2Q9UQ26 1411 aa16.05■□□□□ 0.16
ABCD4-227ENST00000557554 CCDC125Q86Z20 511 aa16.05■□□□□ 0.16
ABCD4-227ENST00000557554 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
ABCD4-227ENST00000557554 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
ABCD4-227ENST00000557554 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
ABCD4-227ENST00000557554 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
ABCD4-227ENST00000557554 ABCC5O15440 1437 aa16.03■□□□□ 0.16
ABCD4-227ENST00000557554 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
ABCD4-227ENST00000557554 DDX17Q92841 729 aaKnown RBP16.02■□□□□ 0.16
ABCD4-227ENST00000557554 AMOTL2Q9Y2J4 779 aa16.02■□□□□ 0.16
ABCD4-227ENST00000557554 DCCP43146 1447 aa16.02■□□□□ 0.15
ABCD4-227ENST00000557554 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
ABCD4-227ENST00000557554 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
ABCD4-227ENST00000557554 MST1RQ04912 1400 aa16.01■□□□□ 0.15
ABCD4-227ENST00000557554 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
ABCD4-227ENST00000557554 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
ABCD4-227ENST00000557554 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-227ENST00000557554 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.99■□□□□ 0.15
ABCD4-227ENST00000557554 USP21Q9UK80 565 aa15.99■□□□□ 0.15
ABCD4-227ENST00000557554 TRPC5Q9UL62 973 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-227ENST00000557554 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
ABCD4-227ENST00000557554 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.15
ABCD4-227ENST00000557554 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
ABCD4-227ENST00000557554 ATRNO75882 1429 aa15.96■□□□□ 0.15
ABCD4-227ENST00000557554 TRPM2O94759 1503 aa15.93■□□□□ 0.14
ABCD4-227ENST00000557554 LRP5O75197 1615 aa15.92■□□□□ 0.14
ABCD4-227ENST00000557554 DAPK1P53355 1430 aa15.92■□□□□ 0.14
ABCD4-227ENST00000557554 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
ABCD4-227ENST00000557554 LAMC1P11047 1609 aa15.91■□□□□ 0.14
ABCD4-227ENST00000557554 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
ABCD4-227ENST00000557554 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
ABCD4-227ENST00000557554 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
ABCD4-227ENST00000557554 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
ABCD4-227ENST00000557554 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
ABCD4-227ENST00000557554 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
ABCD4-227ENST00000557554 DEFB132Q7Z7B7 95 aa15.88■□□□□ 0.13
ABCD4-227ENST00000557554 GJD4Q96KN9 370 aaPredicted RBP15.88■□□□□ 0.13
ABCD4-227ENST00000557554 UNC13BO14795 1591 aa15.87■□□□□ 0.13
ABCD4-227ENST00000557554 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
ABCD4-227ENST00000557554 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
ABCD4-227ENST00000557554 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
ABCD4-227ENST00000557554 METP08581 1390 aa15.86■□□□□ 0.13
ABCD4-227ENST00000557554 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
ABCD4-227ENST00000557554 C1orf167Q5SNV9 1468 aa15.85■□□□□ 0.13
ABCD4-227ENST00000557554 ORAI2Q96SN7 254 aa15.85■□□□□ 0.13
ABCD4-227ENST00000557554 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
ABCD4-227ENST00000557554 HRCP23327 699 aa15.82■□□□□ 0.12
ABCD4-227ENST00000557554 NALCNQ8IZF0 1738 aa15.82■□□□□ 0.12
ABCD4-227ENST00000557554 MYOM2P54296 1465 aa15.81■□□□□ 0.12
ABCD4-227ENST00000557554 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
ABCD4-227ENST00000557554 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
ABCD4-227ENST00000557554 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
ABCD4-227ENST00000557554 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
ABCD4-227ENST00000557554 E9PCH4 1651 aa15.79■□□□□ 0.12
ABCD4-227ENST00000557554 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
ABCD4-227ENST00000557554 GLI3P10071 1580 aa15.78■□□□□ 0.12
ABCD4-227ENST00000557554 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
ABCD4-227ENST00000557554 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
ABCD4-227ENST00000557554 ONECUT3O60422 494 aaPredicted RBP15.76■□□□□ 0.11
ABCD4-227ENST00000557554 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms