RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NBPF3Q9H094 633 aa8.82□□□□□ -1
MTHFD1-216ENST00000557539 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
MTHFD1-216ENST00000557539 GPR37O15354 613 aa8.81□□□□□ -1
MTHFD1-216ENST00000557539 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
MTHFD1-216ENST00000557539 MAP3K7O43318 606 aa8.8□□□□□ -1
MTHFD1-216ENST00000557539 ONECUT3O60422 494 aaPredicted RBP8.8□□□□□ -1
MTHFD1-216ENST00000557539 GRXCR2A6NFK2 248 aa8.79□□□□□ -1
MTHFD1-216ENST00000557539 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
MTHFD1-216ENST00000557539 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
MTHFD1-216ENST00000557539 NUTM2FA1L443 756 aa8.78□□□□□ -1
MTHFD1-216ENST00000557539 OSBPP22059 807 aa8.78□□□□□ -1
MTHFD1-216ENST00000557539 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
MTHFD1-216ENST00000557539 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
MTHFD1-216ENST00000557539 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
MTHFD1-216ENST00000557539 SEPT9Q9UHD8 586 aaPredicted RBP8.77□□□□□ -1.01
MTHFD1-216ENST00000557539 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
MTHFD1-216ENST00000557539 TRIM26Q12899 539 aaPredicted RBP8.76□□□□□ -1.01
MTHFD1-216ENST00000557539 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
MTHFD1-216ENST00000557539 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
MTHFD1-216ENST00000557539 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
MTHFD1-216ENST00000557539 BCAMP50895 628 aa8.75□□□□□ -1.01
MTHFD1-216ENST00000557539 ZFRQ96KR1 1074 aaKnown RBP8.75□□□□□ -1.01
MTHFD1-216ENST00000557539 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
MTHFD1-216ENST00000557539 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
MTHFD1-216ENST00000557539 KIF21AQ7Z4S6 1674 aa8.75□□□□□ -1.01
MTHFD1-216ENST00000557539 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
MTHFD1-216ENST00000557539 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
MTHFD1-216ENST00000557539 IRF6O14896 467 aa8.74□□□□□ -1.01
MTHFD1-216ENST00000557539 SOWAHBA6NEL2 793 aa8.73□□□□□ -1.01
MTHFD1-216ENST00000557539 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
MTHFD1-216ENST00000557539 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
MTHFD1-216ENST00000557539 APBB1O00213 710 aa8.72□□□□□ -1.01
MTHFD1-216ENST00000557539 FLIIQ13045 1269 aa8.72□□□□□ -1.01
MTHFD1-216ENST00000557539 AMHR2Q16671 573 aa8.72□□□□□ -1.01
MTHFD1-216ENST00000557539 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
MTHFD1-216ENST00000557539 PRSS12P56730 875 aa8.71□□□□□ -1.02
MTHFD1-216ENST00000557539 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.02
MTHFD1-216ENST00000557539 GNPATO15228 680 aa8.7□□□□□ -1.02
MTHFD1-216ENST00000557539 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-216ENST00000557539 ADGRL1O94910 1474 aa8.7□□□□□ -1.02
MTHFD1-216ENST00000557539 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
MTHFD1-216ENST00000557539 SMAPO00193 183 aa8.69□□□□□ -1.02
MTHFD1-216ENST00000557539 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
MTHFD1-216ENST00000557539 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-216ENST00000557539 FCHSD2O94868 740 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 FECHP22830 423 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 HRCP23327 699 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 IFFO2Q5TF58 517 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 CERKQ8TCT0 537 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 WBP1LQ9NX94 342 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 PDS5BQ9NTI5 1447 aa8.68□□□□□ -1.02
MTHFD1-216ENST00000557539 HIC1Q14526 733 aa8.67□□□□□ -1.02
MTHFD1-216ENST00000557539 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
MTHFD1-216ENST00000557539 WDR62O43379 1518 aa8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 RSF1Q96T23 1441 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 TATDN2Q93075 761 aa8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-216ENST00000557539 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-216ENST00000557539 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
MTHFD1-216ENST00000557539 ITGBL1O95965 494 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 LRCH3Q96II8 777 aa8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
MTHFD1-216ENST00000557539 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
MTHFD1-216ENST00000557539 GIGYF2Q6Y7W6 1299 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-216ENST00000557539 SAMD7Q7Z3H4 446 aa8.62□□□□□ -1.03
MTHFD1-216ENST00000557539 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
MTHFD1-216ENST00000557539 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
MTHFD1-216ENST00000557539 A0A0G2JS52 829 aa8.61□□□□□ -1.03
MTHFD1-216ENST00000557539 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
MTHFD1-216ENST00000557539 MS4A1P11836 297 aa8.61□□□□□ -1.03
MTHFD1-216ENST00000557539 NYAP1Q6ZVC0 841 aa8.61□□□□□ -1.03
MTHFD1-216ENST00000557539 NCAPD3P42695 1498 aa8.6□□□□□ -1.03
MTHFD1-216ENST00000557539 A6NJR5 290 aa8.6□□□□□ -1.03
MTHFD1-216ENST00000557539 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
MTHFD1-216ENST00000557539 TRAK2O60296 914 aa8.59□□□□□ -1.03
MTHFD1-216ENST00000557539 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
MTHFD1-216ENST00000557539 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
MTHFD1-216ENST00000557539 PTGDRQ13258 359 aa8.58□□□□□ -1.04
MTHFD1-216ENST00000557539 PPP4CP60510 307 aa8.57□□□□□ -1.04
MTHFD1-216ENST00000557539 EYA1Q99502 592 aa8.57□□□□□ -1.04
MTHFD1-216ENST00000557539 REPIN1Q9BWE0 567 aaKnown RBP8.57□□□□□ -1.04
MTHFD1-216ENST00000557539 MCM6Q14566 821 aa8.55□□□□□ -1.04
MTHFD1-216ENST00000557539 SH3D19Q5HYK7 790 aa8.55□□□□□ -1.04
MTHFD1-216ENST00000557539 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
MTHFD1-216ENST00000557539 KCNC4Q03721 635 aa8.54□□□□□ -1.04
MTHFD1-216ENST00000557539 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
MTHFD1-216ENST00000557539 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
MTHFD1-216ENST00000557539 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
MTHFD1-216ENST00000557539 KDM6BO15054 1643 aa8.53□□□□□ -1.04
MTHFD1-216ENST00000557539 RGS20O76081 388 aa8.52□□□□□ -1.05
MTHFD1-216ENST00000557539 CLCN1P35523 988 aa8.52□□□□□ -1.05
MTHFD1-216ENST00000557539 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
MTHFD1-216ENST00000557539 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
MTHFD1-216ENST00000557539 SRCAPQ6ZRS2 3230 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms