RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TTLL12Q14166 644 aaPredicted RBP3.61□□□□□ -1.83
HIF1A-212ENST00000557538 KIAA1468Q9P260 1216 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 POTEB3A0JP26 581 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 GCGRP47871 477 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 POTEBQ6S5H4 581 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 SPIRE2Q8WWL2 714 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 KCNK17Q96T54 332 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 A6NJR5 290 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 RSPH4AQ5TD94 716 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 MYSM1Q5VVJ2 828 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 DMRTA1Q5VZB9 504 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 PNMA3Q9UL41 463 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 VARS2Q5ST30 1063 aaKnown RBP3.6□□□□□ -1.83
HIF1A-212ENST00000557538 BEGAINQ9BUH8 593 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 TMEM259Q4ZIN3 620 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 TBC1D2Q9BYX2 928 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 TIMELESSQ9UNS1 1208 aa3.6□□□□□ -1.83
HIF1A-212ENST00000557538 EMP3P54852 163 aa3.59□□□□□ -1.83
HIF1A-212ENST00000557538 RSBN1LQ6PCB5 846 aaPredicted RBP3.59□□□□□ -1.83
HIF1A-212ENST00000557538 SLF2Q8IX21 1173 aa3.59□□□□□ -1.83
HIF1A-212ENST00000557538 HS3ST6Q96QI5 342 aa3.59□□□□□ -1.83
HIF1A-212ENST00000557538 SALL2Q9Y467 1007 aaPredicted RBP3.59□□□□□ -1.83
HIF1A-212ENST00000557538 LILRB3O75022 631 aa3.58□□□□□ -1.84
HIF1A-212ENST00000557538 LSM11P83369 360 aaKnown RBP eCLIP3.58□□□□□ -1.84
HIF1A-212ENST00000557538 PROX2Q3B8N5 592 aa3.58□□□□□ -1.84
HIF1A-212ENST00000557538 RIC3Q7Z5B4 369 aa3.58□□□□□ -1.84
HIF1A-212ENST00000557538 PRR14Q9BWN1 585 aa3.58□□□□□ -1.84
HIF1A-212ENST00000557538 SPDYE5A6NIY4 337 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 CLK2P49760 499 aaKnown RBP3.57□□□□□ -1.84
HIF1A-212ENST00000557538 PSEN2P49810 448 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 NBPF3Q9H094 633 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 ZMYND15Q9H091 742 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 FAM161AQ3B820 660 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 ADGRD1Q6QNK2 874 aa3.57□□□□□ -1.84
HIF1A-212ENST00000557538 ACTN4O43707 911 aaKnown RBP3.56□□□□□ -1.84
HIF1A-212ENST00000557538 SLC4A3P48751 1232 aa3.56□□□□□ -1.84
HIF1A-212ENST00000557538 DESI1Q6ICB0 168 aa3.56□□□□□ -1.84
HIF1A-212ENST00000557538 NYAP1Q6ZVC0 841 aa3.56□□□□□ -1.84
HIF1A-212ENST00000557538 HOXA2O43364 376 aa3.56□□□□□ -1.84
HIF1A-212ENST00000557538 SLC10A3P09131 477 aa3.56□□□□□ -1.84
HIF1A-212ENST00000557538 SWT1Q5T5J6 900 aaKnown RBP3.56□□□□□ -1.84
HIF1A-212ENST00000557538 KDM4AO75164 1064 aa3.55□□□□□ -1.84
HIF1A-212ENST00000557538 MCM6Q14566 821 aa3.55□□□□□ -1.84
HIF1A-212ENST00000557538 FNBP4Q8N3X1 1017 aaPredicted RBP3.55□□□□□ -1.84
HIF1A-212ENST00000557538 GRIPAP1Q4V328 841 aa3.55□□□□□ -1.84
HIF1A-212ENST00000557538 SOWAHBA6NEL2 793 aa3.54□□□□□ -1.84
HIF1A-212ENST00000557538 RFC5P40937 340 aa3.54□□□□□ -1.84
HIF1A-212ENST00000557538 C14orf37Q86TY3 774 aa3.54□□□□□ -1.84
HIF1A-212ENST00000557538 LIMD1Q9UGP4 676 aa3.54□□□□□ -1.84
HIF1A-212ENST00000557538 HDGFP51858 240 aaKnown RBP3.54□□□□□ -1.84
HIF1A-212ENST00000557538 ZFRQ96KR1 1074 aaKnown RBP3.54□□□□□ -1.84
HIF1A-212ENST00000557538 NUTM1Q86Y26 1132 aa3.54□□□□□ -1.84
HIF1A-212ENST00000557538 PROCA1Q8NCQ7 364 aaPredicted RBP3.54□□□□□ -1.84
HIF1A-212ENST00000557538 FAM205CA6NFA0 338 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 APBB1O00213 710 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 ATP6V1AP38606 617 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 Q3C1V9 767 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 KMT5BQ4FZB7 885 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 FBXO31Q5XUX0 539 aaPredicted RBP3.53□□□□□ -1.84
HIF1A-212ENST00000557538 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 KRTAP3-2Q9BYR7 98 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 ZBTB3Q9H5J0 574 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 DDX11L8A8MPP1 907 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 MORN1Q5T089 497 aa3.53□□□□□ -1.84
HIF1A-212ENST00000557538 MRPL50Q8N5N7 158 aaKnown RBP3.53□□□□□ -1.84
HIF1A-212ENST00000557538 FAM163AQ96GL9 167 aaPredicted RBP3.53□□□□□ -1.84
HIF1A-212ENST00000557538 MOXD2PA6NHM9 499 aa3.52□□□□□ -1.85
HIF1A-212ENST00000557538 SAMD7Q7Z3H4 446 aa3.52□□□□□ -1.85
HIF1A-212ENST00000557538 TSR3Q9UJK0 312 aaKnown RBP3.52□□□□□ -1.85
HIF1A-212ENST00000557538 THAP11Q96EK4 314 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 LRCH3Q96II8 777 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 PCDHGC3Q9UN70 934 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 MSS51Q4VC12 460 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 ARXQ96QS3 562 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.51□□□□□ -1.85
HIF1A-212ENST00000557538 HRCP23327 699 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 ANKK1Q8NFD2 765 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 MARVELD3Q96A59 401 aa3.51□□□□□ -1.85
HIF1A-212ENST00000557538 ZC3H4Q9UPT8 1303 aaKnown RBP3.51□□□□□ -1.85
HIF1A-212ENST00000557538 SMAPO00193 183 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 TRAK2O60296 914 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 CFHP08603 1231 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 MTMR2Q13614 643 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 BRICD5Q6PL45 260 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 RDH13Q8NBN7 331 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 NLRP7Q8WX94 980 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 AXIN2Q9Y2T1 843 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 FDX1P10109 184 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 NDUFV2P19404 249 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 GJD4Q96KN9 370 aaPredicted RBP3.5□□□□□ -1.85
HIF1A-212ENST00000557538 RTL5Q5HYW3 569 aaPredicted RBP3.5□□□□□ -1.85
HIF1A-212ENST00000557538 RETREG3Q86VR2 466 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 MYT1LQ9UL68 1186 aa3.5□□□□□ -1.85
HIF1A-212ENST00000557538 PCDHB15Q9Y5E8 787 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 NR1I2O75469 434 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 IFFO2Q5TF58 517 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 LYPD8Q6UX82 237 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 MTMR14Q8NCE2 650 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 POLR3EQ9NVU0 708 aa3.49□□□□□ -1.85
HIF1A-212ENST00000557538 SEPT9Q9UHD8 586 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms