RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
ATXN3-245ENST00000556958 KDM5DQ9BY66 1539 aa9.58□□□□□ -0.88
ATXN3-245ENST00000556958 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
ATXN3-245ENST00000556958 EID1Q9Y6B2 187 aa9.58□□□□□ -0.88
ATXN3-245ENST00000556958 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-245ENST00000556958 KIF3BO15066 747 aa9.57□□□□□ -0.88
ATXN3-245ENST00000556958 BMP2KQ9NSY1 1161 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-245ENST00000556958 TRPC6Q9Y210 931 aa9.57□□□□□ -0.88
ATXN3-245ENST00000556958 UGGT1Q9NYU2 1555 aa9.57□□□□□ -0.88
ATXN3-245ENST00000556958 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
ATXN3-245ENST00000556958 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
ATXN3-245ENST00000556958 KCNA6P17658 529 aa9.56□□□□□ -0.88
ATXN3-245ENST00000556958 CCDC61Q9Y6R9 512 aa9.56□□□□□ -0.88
ATXN3-245ENST00000556958 KIF14Q15058 1648 aa9.56□□□□□ -0.88
ATXN3-245ENST00000556958 PZPP20742 1482 aa9.55□□□□□ -0.88
ATXN3-245ENST00000556958 DHX29Q7Z478 1369 aaKnown RBP9.55□□□□□ -0.88
ATXN3-245ENST00000556958 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
ATXN3-245ENST00000556958 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
ATXN3-245ENST00000556958 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
ATXN3-245ENST00000556958 CFDP1Q9UEE9 299 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-245ENST00000556958 DEPDC5O75140 1603 aa9.55□□□□□ -0.88
ATXN3-245ENST00000556958 KIAA1107Q9UPP5 1409 aa9.55□□□□□ -0.88
ATXN3-245ENST00000556958 SYNMO15061 1565 aa9.54□□□□□ -0.88
ATXN3-245ENST00000556958 NGLY1Q96IV0 654 aa9.54□□□□□ -0.88
ATXN3-245ENST00000556958 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-245ENST00000556958 KIDINS220Q9ULH0 1771 aa9.54□□□□□ -0.88
ATXN3-245ENST00000556958 CLTCQ00610 1675 aaKnown RBP9.54□□□□□ -0.88
ATXN3-245ENST00000556958 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
ATXN3-245ENST00000556958 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
ATXN3-245ENST00000556958 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
ATXN3-245ENST00000556958 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-245ENST00000556958 FGD6Q6ZV73 1430 aa9.53□□□□□ -0.88
ATXN3-245ENST00000556958 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
ATXN3-245ENST00000556958 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
ATXN3-245ENST00000556958 MSH6P52701 1360 aa9.52□□□□□ -0.88
ATXN3-245ENST00000556958 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
ATXN3-245ENST00000556958 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
ATXN3-245ENST00000556958 LTKP29376 864 aa9.52□□□□□ -0.89
ATXN3-245ENST00000556958 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
ATXN3-245ENST00000556958 AFF2P51816 1311 aa9.52□□□□□ -0.89
ATXN3-245ENST00000556958 ST18O60284 1047 aa9.51□□□□□ -0.89
ATXN3-245ENST00000556958 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
ATXN3-245ENST00000556958 SCAF11Q99590 1463 aaKnown RBP9.5□□□□□ -0.89
ATXN3-245ENST00000556958 ATP7AQ04656 1500 aa9.5□□□□□ -0.89
ATXN3-245ENST00000556958 POLR1AO95602 1720 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-245ENST00000556958 TIE1P35590 1138 aa9.49□□□□□ -0.89
ATXN3-245ENST00000556958 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
ATXN3-245ENST00000556958 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
ATXN3-245ENST00000556958 IFFO2Q5TF58 517 aa9.48□□□□□ -0.89
ATXN3-245ENST00000556958 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
ATXN3-245ENST00000556958 LRP6O75581 1613 aa9.47□□□□□ -0.89
ATXN3-245ENST00000556958 UBTFP17480 764 aaKnown RBP9.47□□□□□ -0.89
ATXN3-245ENST00000556958 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
ATXN3-245ENST00000556958 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.9
ATXN3-245ENST00000556958 SLC26A8Q96RN1 970 aa9.46□□□□□ -0.9
ATXN3-245ENST00000556958 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.9
ATXN3-245ENST00000556958 SEC24BO95487 1268 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 BCANQ96GW7 911 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 RGS12O14924 1447 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 EEA1Q15075 1411 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
ATXN3-245ENST00000556958 MAP3K13O43283 966 aa9.44□□□□□ -0.9
ATXN3-245ENST00000556958 ATF3P18847 181 aa9.44□□□□□ -0.9
ATXN3-245ENST00000556958 GPATCH8Q9UKJ3 1502 aaKnown RBP9.44□□□□□ -0.9
ATXN3-245ENST00000556958 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
ATXN3-245ENST00000556958 PREX2Q70Z35 1606 aa9.43□□□□□ -0.9
ATXN3-245ENST00000556958 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
ATXN3-245ENST00000556958 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
ATXN3-245ENST00000556958 YY1P25490 414 aa9.43□□□□□ -0.9
ATXN3-245ENST00000556958 LRRC59Q96AG4 307 aaKnown RBP9.43□□□□□ -0.9
ATXN3-245ENST00000556958 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
ATXN3-245ENST00000556958 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
ATXN3-245ENST00000556958 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
ATXN3-245ENST00000556958 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
ATXN3-245ENST00000556958 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-245ENST00000556958 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-245ENST00000556958 CCDC18Q5T9S5 1454 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 ARHGAP23Q9P227 1491 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
ATXN3-245ENST00000556958 ABCC3O15438 1527 aa9.41□□□□□ -0.9
ATXN3-245ENST00000556958 NCOA3Q9Y6Q9 1424 aa9.4□□□□□ -0.9
ATXN3-245ENST00000556958 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-245ENST00000556958 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-245ENST00000556958 HDGFP51858 240 aaKnown RBP9.39□□□□□ -0.91
ATXN3-245ENST00000556958 USP21Q9UK80 565 aa9.39□□□□□ -0.91
ATXN3-245ENST00000556958 SLIT1O75093 1534 aa9.39□□□□□ -0.91
ATXN3-245ENST00000556958 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
ATXN3-245ENST00000556958 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
ATXN3-245ENST00000556958 BRINP3Q76B58 766 aa9.38□□□□□ -0.91
ATXN3-245ENST00000556958 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
ATXN3-245ENST00000556958 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
ATXN3-245ENST00000556958 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
ATXN3-245ENST00000556958 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms