RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
PCNX1-213ENST00000556846 TCOF1Q13428 1488 aaKnown RBP11.04□□□□□ -0.64
PCNX1-213ENST00000556846 ERBINQ96RT1 1412 aa11.03□□□□□ -0.64
PCNX1-213ENST00000556846 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
PCNX1-213ENST00000556846 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
PCNX1-213ENST00000556846 SHANK2Q9UPX8 1470 aa11.03□□□□□ -0.64
PCNX1-213ENST00000556846 ZNF142P52746 1687 aaPredicted RBP11.03□□□□□ -0.64
PCNX1-213ENST00000556846 ABCC3O15438 1527 aa11.03□□□□□ -0.64
PCNX1-213ENST00000556846 UGGT1Q9NYU2 1555 aa11.03□□□□□ -0.64
PCNX1-213ENST00000556846 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.64
PCNX1-213ENST00000556846 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
PCNX1-213ENST00000556846 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.65
PCNX1-213ENST00000556846 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
PCNX1-213ENST00000556846 ITGAEP38570 1179 aa11□□□□□ -0.65
PCNX1-213ENST00000556846 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
PCNX1-213ENST00000556846 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
PCNX1-213ENST00000556846 EID1Q9Y6B2 187 aa11□□□□□ -0.65
PCNX1-213ENST00000556846 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
PCNX1-213ENST00000556846 ERVK-7P63135 1459 aa11□□□□□ -0.65
PCNX1-213ENST00000556846 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
PCNX1-213ENST00000556846 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
PCNX1-213ENST00000556846 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
PCNX1-213ENST00000556846 TOM1O60784 492 aa10.97□□□□□ -0.65
PCNX1-213ENST00000556846 BCANQ96GW7 911 aa10.97□□□□□ -0.65
PCNX1-213ENST00000556846 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
PCNX1-213ENST00000556846 SPATA31D1Q6ZQQ2 1576 aa10.97□□□□□ -0.65
PCNX1-213ENST00000556846 MROH1Q8NDA8 1641 aa10.96□□□□□ -0.65
PCNX1-213ENST00000556846 ANKRD50Q9ULJ7 1429 aa10.96□□□□□ -0.65
PCNX1-213ENST00000556846 IDI1Q13907 227 aa10.96□□□□□ -0.65
PCNX1-213ENST00000556846 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
PCNX1-213ENST00000556846 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
PCNX1-213ENST00000556846 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
PCNX1-213ENST00000556846 LTKP29376 864 aa10.95□□□□□ -0.66
PCNX1-213ENST00000556846 CEP152O94986 1710 aa10.95□□□□□ -0.66
PCNX1-213ENST00000556846 MED14O60244 1454 aa10.94□□□□□ -0.66
PCNX1-213ENST00000556846 SLC52A1Q9NWF4 448 aa10.94□□□□□ -0.66
PCNX1-213ENST00000556846 CPS1P31327 1500 aa10.94□□□□□ -0.66
PCNX1-213ENST00000556846 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
PCNX1-213ENST00000556846 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
PCNX1-213ENST00000556846 ADGRL2O95490 1459 aa10.93□□□□□ -0.66
PCNX1-213ENST00000556846 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
PCNX1-213ENST00000556846 SCAF11Q99590 1463 aaKnown RBP10.92□□□□□ -0.66
PCNX1-213ENST00000556846 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
PCNX1-213ENST00000556846 TMEM2Q9UHN6 1383 aa10.91□□□□□ -0.66
PCNX1-213ENST00000556846 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-213ENST00000556846 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
PCNX1-213ENST00000556846 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
PCNX1-213ENST00000556846 LMTK2Q8IWU2 1503 aa10.9□□□□□ -0.66
PCNX1-213ENST00000556846 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.66
PCNX1-213ENST00000556846 SLC26A8Q96RN1 970 aa10.9□□□□□ -0.66
PCNX1-213ENST00000556846 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
PCNX1-213ENST00000556846 ROCK1Q13464 1354 aa10.9□□□□□ -0.67
PCNX1-213ENST00000556846 HSPA1LP34931 641 aa10.89□□□□□ -0.67
PCNX1-213ENST00000556846 VWDEQ8N2E2 1590 aa10.89□□□□□ -0.67
PCNX1-213ENST00000556846 NUP155O75694 1391 aa10.89□□□□□ -0.67
PCNX1-213ENST00000556846 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
PCNX1-213ENST00000556846 ARHGAP23Q9P227 1491 aa10.88□□□□□ -0.67
PCNX1-213ENST00000556846 NOS1P29475 1434 aa10.88□□□□□ -0.67
PCNX1-213ENST00000556846 SLIT1O75093 1534 aa10.88□□□□□ -0.67
PCNX1-213ENST00000556846 EFCAB6Q5THR3 1501 aa10.88□□□□□ -0.67
PCNX1-213ENST00000556846 UBR1Q8IWV7 1749 aa10.87□□□□□ -0.67
PCNX1-213ENST00000556846 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
PCNX1-213ENST00000556846 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
PCNX1-213ENST00000556846 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
PCNX1-213ENST00000556846 KCNA6P17658 529 aa10.86□□□□□ -0.67
PCNX1-213ENST00000556846 PROSER2Q86WR7 435 aaPredicted RBP10.86□□□□□ -0.67
PCNX1-213ENST00000556846 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
PCNX1-213ENST00000556846 LRRC7Q96NW7 1537 aa10.85□□□□□ -0.67
PCNX1-213ENST00000556846 NUTM2DQ5VT03 806 aaPredicted RBP10.85□□□□□ -0.67
PCNX1-213ENST00000556846 ILDR2Q71H61 639 aa10.85□□□□□ -0.67
PCNX1-213ENST00000556846 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.85□□□□□ -0.67
PCNX1-213ENST00000556846 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
PCNX1-213ENST00000556846 SYNMO15061 1565 aa10.84□□□□□ -0.67
PCNX1-213ENST00000556846 TRIM52Q96A61 297 aa10.83□□□□□ -0.68
PCNX1-213ENST00000556846 RIMS2Q9UQ26 1411 aa10.83□□□□□ -0.68
PCNX1-213ENST00000556846 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
PCNX1-213ENST00000556846 ADGRB3O60242 1522 aa10.82□□□□□ -0.68
PCNX1-213ENST00000556846 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
PCNX1-213ENST00000556846 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
PCNX1-213ENST00000556846 TET3O43151 1660 aa10.81□□□□□ -0.68
PCNX1-213ENST00000556846 TBX22Q9Y458 520 aa10.8□□□□□ -0.68
PCNX1-213ENST00000556846 UNC13BO14795 1591 aa10.8□□□□□ -0.68
PCNX1-213ENST00000556846 PLEKHG1Q9ULL1 1385 aa10.79□□□□□ -0.68
PCNX1-213ENST00000556846 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
PCNX1-213ENST00000556846 RRBP1Q9P2E9 1410 aaKnown RBP10.78□□□□□ -0.68
PCNX1-213ENST00000556846 SOCS7O14512 581 aa10.78□□□□□ -0.68
PCNX1-213ENST00000556846 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
PCNX1-213ENST00000556846 MSH6P52701 1360 aa10.77□□□□□ -0.68
PCNX1-213ENST00000556846 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.68
PCNX1-213ENST00000556846 ZFYVE9O95405 1425 aa10.77□□□□□ -0.68
PCNX1-213ENST00000556846 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
PCNX1-213ENST00000556846 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
PCNX1-213ENST00000556846 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
PCNX1-213ENST00000556846 E9PCH4 1651 aa10.76□□□□□ -0.69
PCNX1-213ENST00000556846 AMOTL2Q9Y2J4 779 aa10.75□□□□□ -0.69
PCNX1-213ENST00000556846 TMEM131LA2VDJ0 1609 aa10.75□□□□□ -0.69
PCNX1-213ENST00000556846 NAIPQ13075 1403 aa10.75□□□□□ -0.69
PCNX1-213ENST00000556846 ATF3P18847 181 aa10.74□□□□□ -0.69
PCNX1-213ENST00000556846 FAM135BQ49AJ0 1406 aa10.74□□□□□ -0.69
PCNX1-213ENST00000556846 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms