RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 ANKLE1Q8NAG6 615 aa9.13□□□□□ -0.95
RDH11-208ENST00000556692 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
RDH11-208ENST00000556692 GDF9O60383 454 aa9.12□□□□□ -0.95
RDH11-208ENST00000556692 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
RDH11-208ENST00000556692 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
RDH11-208ENST00000556692 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
RDH11-208ENST00000556692 TLL1O43897 1013 aa9.08□□□□□ -0.96
RDH11-208ENST00000556692 S1PR4O95977 384 aa9.07□□□□□ -0.96
RDH11-208ENST00000556692 PDIA6Q15084 440 aa9.07□□□□□ -0.96
RDH11-208ENST00000556692 WIPF1O43516 503 aa9.06□□□□□ -0.96
RDH11-208ENST00000556692 GMPR2Q9P2T1 348 aaKnown RBP9.06□□□□□ -0.96
RDH11-208ENST00000556692 DACH1Q9UI36 760 aa9.06□□□□□ -0.96
RDH11-208ENST00000556692 GRXCR2A6NFK2 248 aa9.05□□□□□ -0.96
RDH11-208ENST00000556692 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
RDH11-208ENST00000556692 FOXC1Q12948 553 aa9.05□□□□□ -0.96
RDH11-208ENST00000556692 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
RDH11-208ENST00000556692 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
RDH11-208ENST00000556692 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
RDH11-208ENST00000556692 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
RDH11-208ENST00000556692 AXIN1O15169 862 aa9.03□□□□□ -0.96
RDH11-208ENST00000556692 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
RDH11-208ENST00000556692 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
RDH11-208ENST00000556692 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
RDH11-208ENST00000556692 PADI6Q6TGC4 694 aa8.99□□□□□ -0.97
RDH11-208ENST00000556692 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
RDH11-208ENST00000556692 PKD2L1Q9P0L9 805 aa8.98□□□□□ -0.97
RDH11-208ENST00000556692 ADH1BP00325 375 aa8.97□□□□□ -0.97
RDH11-208ENST00000556692 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
RDH11-208ENST00000556692 SLC6A16Q9GZN6 736 aa8.97□□□□□ -0.97
RDH11-208ENST00000556692 AVPP01185 164 aa8.96□□□□□ -0.98
RDH11-208ENST00000556692 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
RDH11-208ENST00000556692 FAM181BA6NEQ2 426 aa8.95□□□□□ -0.98
RDH11-208ENST00000556692 CTC1Q2NKJ3 1217 aa8.95□□□□□ -0.98
RDH11-208ENST00000556692 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
RDH11-208ENST00000556692 TTC13Q8NBP0 860 aa8.95□□□□□ -0.98
RDH11-208ENST00000556692 EYA1Q99502 592 aa8.94□□□□□ -0.98
RDH11-208ENST00000556692 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
RDH11-208ENST00000556692 ACTN4O43707 911 aaKnown RBP8.93□□□□□ -0.98
RDH11-208ENST00000556692 OSBPP22059 807 aa8.93□□□□□ -0.98
RDH11-208ENST00000556692 NR1I2O75469 434 aa8.92□□□□□ -0.98
RDH11-208ENST00000556692 TOR4AQ9NXH8 423 aa8.92□□□□□ -0.98
RDH11-208ENST00000556692 DCAF8L2P0C7V8 631 aa8.91□□□□□ -0.98
RDH11-208ENST00000556692 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
RDH11-208ENST00000556692 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
RDH11-208ENST00000556692 CFHP08603 1231 aa8.89□□□□□ -0.99
RDH11-208ENST00000556692 DNAJB2P25686 324 aa8.89□□□□□ -0.99
RDH11-208ENST00000556692 NPDC1Q9NQX5 325 aaPredicted RBP8.89□□□□□ -0.99
RDH11-208ENST00000556692 CD2BP2O95400 341 aaKnown RBP8.88□□□□□ -0.99
RDH11-208ENST00000556692 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
RDH11-208ENST00000556692 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
RDH11-208ENST00000556692 RPIAP49247 311 aa8.87□□□□□ -0.99
RDH11-208ENST00000556692 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
RDH11-208ENST00000556692 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
RDH11-208ENST00000556692 E2F4Q16254 413 aa8.84□□□□□ -0.99
RDH11-208ENST00000556692 SPSB2Q99619 263 aa8.84□□□□□ -0.99
RDH11-208ENST00000556692 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
RDH11-208ENST00000556692 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
RDH11-208ENST00000556692 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
RDH11-208ENST00000556692 SUZ12Q15022 739 aaKnown RBP8.82□□□□□ -1
RDH11-208ENST00000556692 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
RDH11-208ENST00000556692 TRIM47Q96LD4 638 aa8.82□□□□□ -1
RDH11-208ENST00000556692 ZSCAN1Q8NBB4 408 aa8.81□□□□□ -1
RDH11-208ENST00000556692 FCF1Q9Y324 198 aaKnown RBP8.81□□□□□ -1
RDH11-208ENST00000556692 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
RDH11-208ENST00000556692 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
RDH11-208ENST00000556692 SLC10A3P09131 477 aa8.78□□□□□ -1
RDH11-208ENST00000556692 KIFC2Q96AC6 838 aa8.78□□□□□ -1
RDH11-208ENST00000556692 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
RDH11-208ENST00000556692 ZBTB24O43167 697 aaPredicted RBP8.77□□□□□ -1.01
RDH11-208ENST00000556692 SMPD1P17405 629 aa8.76□□□□□ -1.01
RDH11-208ENST00000556692 GMPRP36959 345 aa8.76□□□□□ -1.01
RDH11-208ENST00000556692 SNIP1Q8TAD8 396 aaKnown RBP8.76□□□□□ -1.01
RDH11-208ENST00000556692 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
RDH11-208ENST00000556692 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
RDH11-208ENST00000556692 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
RDH11-208ENST00000556692 RSPH4AQ5TD94 716 aa8.72□□□□□ -1.01
RDH11-208ENST00000556692 IRF7Q92985 503 aa8.72□□□□□ -1.01
RDH11-208ENST00000556692 WNT7AO00755 349 aa8.71□□□□□ -1.02
RDH11-208ENST00000556692 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
RDH11-208ENST00000556692 FAM161AQ3B820 660 aa8.71□□□□□ -1.02
RDH11-208ENST00000556692 J3QL48 77 aa8.7□□□□□ -1.02
RDH11-208ENST00000556692 HPS1Q92902 700 aa8.69□□□□□ -1.02
RDH11-208ENST00000556692 MRGPRX2Q96LB1 330 aa8.68□□□□□ -1.02
RDH11-208ENST00000556692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.67□□□□□ -1.02
RDH11-208ENST00000556692 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
RDH11-208ENST00000556692 PTGDRQ13258 359 aa8.67□□□□□ -1.02
RDH11-208ENST00000556692 VEGFBP49765 207 aa8.66□□□□□ -1.02
RDH11-208ENST00000556692 FAM160A2Q8N612 972 aaPredicted RBP8.66□□□□□ -1.02
RDH11-208ENST00000556692 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
RDH11-208ENST00000556692 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
RDH11-208ENST00000556692 MORN1Q5T089 497 aa8.64□□□□□ -1.03
RDH11-208ENST00000556692 THAP11Q96EK4 314 aa8.64□□□□□ -1.03
RDH11-208ENST00000556692 TRIM32Q13049 653 aa8.63□□□□□ -1.03
RDH11-208ENST00000556692 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
RDH11-208ENST00000556692 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
RDH11-208ENST00000556692 H3BM21 787 aa8.61□□□□□ -1.03
RDH11-208ENST00000556692 FECHP22830 423 aa8.61□□□□□ -1.03
RDH11-208ENST00000556692 FUT2Q10981 343 aa8.61□□□□□ -1.03
RDH11-208ENST00000556692 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
RDH11-208ENST00000556692 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms