RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
ARHGEF40-207ENST00000556399 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
ARHGEF40-207ENST00000556399 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
ARHGEF40-207ENST00000556399 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF40-207ENST00000556399 KCNJ4P48050 445 aa18.71■□□□□ 0.59
ARHGEF40-207ENST00000556399 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
ARHGEF40-207ENST00000556399 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
ARHGEF40-207ENST00000556399 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
ARHGEF40-207ENST00000556399 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
ARHGEF40-207ENST00000556399 PDZRN3Q9UPQ7 1066 aa18.7■□□□□ 0.58
ARHGEF40-207ENST00000556399 CHAF1AQ13111 956 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF40-207ENST00000556399 ARID3AQ99856 593 aa18.69■□□□□ 0.58
ARHGEF40-207ENST00000556399 ST18O60284 1047 aa18.69■□□□□ 0.58
ARHGEF40-207ENST00000556399 SYAP1Q96A49 352 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF40-207ENST00000556399 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
ARHGEF40-207ENST00000556399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.68■□□□□ 0.58
ARHGEF40-207ENST00000556399 KIAA2012Q0VF49 1180 aa18.68■□□□□ 0.58
ARHGEF40-207ENST00000556399 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
ARHGEF40-207ENST00000556399 IQGAP2Q13576 1575 aa18.67■□□□□ 0.58
ARHGEF40-207ENST00000556399 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
ARHGEF40-207ENST00000556399 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
ARHGEF40-207ENST00000556399 RIPK4P57078 832 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 FAM43AQ8N2R8 423 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 HMMRO75330 724 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
ARHGEF40-207ENST00000556399 FOXD4L5Q5VV16 416 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF40-207ENST00000556399 FOXD4L4Q8WXT5 416 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF40-207ENST00000556399 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
ARHGEF40-207ENST00000556399 TRAK2O60296 914 aa18.65■□□□□ 0.58
ARHGEF40-207ENST00000556399 MRE11P49959 708 aa18.65■□□□□ 0.58
ARHGEF40-207ENST00000556399 MTHFSP49914 203 aa18.64■□□□□ 0.58
ARHGEF40-207ENST00000556399 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
ARHGEF40-207ENST00000556399 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
ARHGEF40-207ENST00000556399 SLC4A10Q6U841 1118 aa18.63■□□□□ 0.57
ARHGEF40-207ENST00000556399 UGGT2Q9NYU1 1516 aa18.63■□□□□ 0.57
ARHGEF40-207ENST00000556399 KIAA1211Q6ZU35 1233 aa18.63■□□□□ 0.57
ARHGEF40-207ENST00000556399 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
ARHGEF40-207ENST00000556399 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
ARHGEF40-207ENST00000556399 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF40-207ENST00000556399 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
ARHGEF40-207ENST00000556399 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
ARHGEF40-207ENST00000556399 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
ARHGEF40-207ENST00000556399 FGD1P98174 961 aa18.61■□□□□ 0.57
ARHGEF40-207ENST00000556399 DRC7Q8IY82 874 aa18.6■□□□□ 0.57
ARHGEF40-207ENST00000556399 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
ARHGEF40-207ENST00000556399 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
ARHGEF40-207ENST00000556399 MLECQ14165 292 aa18.59■□□□□ 0.57
ARHGEF40-207ENST00000556399 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
ARHGEF40-207ENST00000556399 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF40-207ENST00000556399 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
ARHGEF40-207ENST00000556399 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
ARHGEF40-207ENST00000556399 EXOSC9Q06265 439 aaKnown RBP18.56■□□□□ 0.56
ARHGEF40-207ENST00000556399 DUSP27Q5VZP5 1158 aa18.56■□□□□ 0.56
ARHGEF40-207ENST00000556399 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
ARHGEF40-207ENST00000556399 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
ARHGEF40-207ENST00000556399 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
ARHGEF40-207ENST00000556399 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
ARHGEF40-207ENST00000556399 AFAP1Q8N556 730 aa18.55■□□□□ 0.56
ARHGEF40-207ENST00000556399 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
ARHGEF40-207ENST00000556399 PHF14O94880 888 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 WWC1Q8IX03 1113 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 SLC12A5Q9H2X9 1139 aa18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF40-207ENST00000556399 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 REC8O95072 547 aa18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 FOXD4L6Q3SYB3 417 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 MCTP1Q6DN14 999 aa18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 FOXD4L3Q6VB84 417 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-207ENST00000556399 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
ARHGEF40-207ENST00000556399 NUCB2P80303 420 aa18.52■□□□□ 0.56
ARHGEF40-207ENST00000556399 MCM4P33991 863 aa18.52■□□□□ 0.55
ARHGEF40-207ENST00000556399 DHX29Q7Z478 1369 aaKnown RBP18.52■□□□□ 0.55
ARHGEF40-207ENST00000556399 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
ARHGEF40-207ENST00000556399 NKTRP30414 1462 aaKnown RBP18.51■□□□□ 0.55
ARHGEF40-207ENST00000556399 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
ARHGEF40-207ENST00000556399 RILPL2Q969X0 211 aa18.51■□□□□ 0.55
ARHGEF40-207ENST00000556399 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF40-207ENST00000556399 RALGAPBQ86X10 1494 aa18.5■□□□□ 0.55
ARHGEF40-207ENST00000556399 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
ARHGEF40-207ENST00000556399 CDC45O75419 566 aa18.5■□□□□ 0.55
ARHGEF40-207ENST00000556399 NOB1Q9ULX3 412 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-207ENST00000556399 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-207ENST00000556399 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
ARHGEF40-207ENST00000556399 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
ARHGEF40-207ENST00000556399 NRDCO43847 1150 aa18.49■□□□□ 0.55
ARHGEF40-207ENST00000556399 GNAI1P63096 354 aa18.48■□□□□ 0.55
ARHGEF40-207ENST00000556399 TAOK2Q9UL54 1235 aa18.48■□□□□ 0.55
ARHGEF40-207ENST00000556399 CCDC141Q6ZP82 1450 aa18.48■□□□□ 0.55
ARHGEF40-207ENST00000556399 HMOX1P09601 288 aa18.48■□□□□ 0.55
ARHGEF40-207ENST00000556399 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-207ENST00000556399 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms