RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 FCHSD2O94868 740 aa8.33□□□□□ -1.08
ATXN3-240ENST00000556339 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
ATXN3-240ENST00000556339 KMT5BQ4FZB7 885 aa8.33□□□□□ -1.08
ATXN3-240ENST00000556339 ZPR1O75312 459 aa8.32□□□□□ -1.08
ATXN3-240ENST00000556339 ADGRG1Q9Y653 693 aa8.32□□□□□ -1.08
ATXN3-240ENST00000556339 RCCD1A6NED2 376 aa8.31□□□□□ -1.08
ATXN3-240ENST00000556339 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
ATXN3-240ENST00000556339 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-240ENST00000556339 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
ATXN3-240ENST00000556339 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
ATXN3-240ENST00000556339 CFHP08603 1231 aa8.29□□□□□ -1.08
ATXN3-240ENST00000556339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.28□□□□□ -1.08
ATXN3-240ENST00000556339 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-240ENST00000556339 OATP04181 439 aa8.27□□□□□ -1.09
ATXN3-240ENST00000556339 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
ATXN3-240ENST00000556339 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
ATXN3-240ENST00000556339 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
ATXN3-240ENST00000556339 CCDC180Q9P1Z9 1646 aa8.26□□□□□ -1.09
ATXN3-240ENST00000556339 TLL1O43897 1013 aa8.26□□□□□ -1.09
ATXN3-240ENST00000556339 HIC1Q14526 733 aa8.26□□□□□ -1.09
ATXN3-240ENST00000556339 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
ATXN3-240ENST00000556339 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
ATXN3-240ENST00000556339 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-240ENST00000556339 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
ATXN3-240ENST00000556339 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
ATXN3-240ENST00000556339 NR1I2O75469 434 aa8.23□□□□□ -1.09
ATXN3-240ENST00000556339 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
ATXN3-240ENST00000556339 TESPA1A2RU30 521 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-240ENST00000556339 RNF223E7ERA6 249 aa8.22□□□□□ -1.09
ATXN3-240ENST00000556339 SLC19A1P41440 591 aa8.21□□□□□ -1.1
ATXN3-240ENST00000556339 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.1
ATXN3-240ENST00000556339 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
ATXN3-240ENST00000556339 GNPATO15228 680 aa8.2□□□□□ -1.1
ATXN3-240ENST00000556339 S1PR4O95977 384 aa8.2□□□□□ -1.1
ATXN3-240ENST00000556339 SLC10A3P09131 477 aa8.2□□□□□ -1.1
ATXN3-240ENST00000556339 ADH1BP00325 375 aa8.19□□□□□ -1.1
ATXN3-240ENST00000556339 ANKLE1Q8NAG6 615 aa8.19□□□□□ -1.1
ATXN3-240ENST00000556339 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-240ENST00000556339 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
ATXN3-240ENST00000556339 FECHP22830 423 aa8.17□□□□□ -1.1
ATXN3-240ENST00000556339 PUS10Q3MIT2 529 aaKnown RBP8.17□□□□□ -1.1
ATXN3-240ENST00000556339 SLC6A16Q9GZN6 736 aa8.17□□□□□ -1.1
ATXN3-240ENST00000556339 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
ATXN3-240ENST00000556339 PKDCCQ504Y2 493 aa8.15□□□□□ -1.1
ATXN3-240ENST00000556339 SCUBE3Q8IX30 993 aa8.15□□□□□ -1.1
ATXN3-240ENST00000556339 DAXXQ9UER7 740 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-240ENST00000556339 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-240ENST00000556339 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
ATXN3-240ENST00000556339 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
ATXN3-240ENST00000556339 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
ATXN3-240ENST00000556339 SULF1Q8IWU6 871 aa8.14□□□□□ -1.11
ATXN3-240ENST00000556339 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
ATXN3-240ENST00000556339 SPSB2Q99619 263 aa8.14□□□□□ -1.11
ATXN3-240ENST00000556339 LCE2BO14633 110 aa8.13□□□□□ -1.11
ATXN3-240ENST00000556339 FUT2Q10981 343 aa8.11□□□□□ -1.11
ATXN3-240ENST00000556339 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
ATXN3-240ENST00000556339 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
ATXN3-240ENST00000556339 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
ATXN3-240ENST00000556339 GPR37O15354 613 aa8.1□□□□□ -1.11
ATXN3-240ENST00000556339 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
ATXN3-240ENST00000556339 FAM187AA6NFU0 413 aa8.09□□□□□ -1.11
ATXN3-240ENST00000556339 EMID1Q96A84 441 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-240ENST00000556339 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-240ENST00000556339 GRIPAP1Q4V328 841 aa8.08□□□□□ -1.12
ATXN3-240ENST00000556339 MORN1Q5T089 497 aa8.08□□□□□ -1.12
ATXN3-240ENST00000556339 TRIM67Q6ZTA4 783 aa8.08□□□□□ -1.12
ATXN3-240ENST00000556339 PRR20EP86478 221 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 PRR20CP86479 221 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 PRR20DP86480 221 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 PRR20BP86481 221 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 PRR20AP86496 221 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 FOXC1Q12948 553 aa8.07□□□□□ -1.12
ATXN3-240ENST00000556339 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
ATXN3-240ENST00000556339 DGAT1O75907 488 aa8.06□□□□□ -1.12
ATXN3-240ENST00000556339 GCGRP47871 477 aa8.06□□□□□ -1.12
ATXN3-240ENST00000556339 PLA2G2CQ5R387 149 aa8.06□□□□□ -1.12
ATXN3-240ENST00000556339 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
ATXN3-240ENST00000556339 PHOX2BQ99453 314 aa8.05□□□□□ -1.12
ATXN3-240ENST00000556339 ZBTB24O43167 697 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-240ENST00000556339 CD2BP2O95400 341 aaKnown RBP8.04□□□□□ -1.12
ATXN3-240ENST00000556339 KDM2AQ9Y2K7 1162 aa8.04□□□□□ -1.12
ATXN3-240ENST00000556339 GDF9O60383 454 aa8.03□□□□□ -1.12
ATXN3-240ENST00000556339 MYT1Q01538 1121 aa8.02□□□□□ -1.13
ATXN3-240ENST00000556339 MAP2K5Q13163 448 aa8.02□□□□□ -1.13
ATXN3-240ENST00000556339 Q3C1V9 767 aa8.02□□□□□ -1.13
ATXN3-240ENST00000556339 RPIAP49247 311 aa8.01□□□□□ -1.13
ATXN3-240ENST00000556339 THAP11Q96EK4 314 aa8.01□□□□□ -1.13
ATXN3-240ENST00000556339 PRDM9Q9NQV7 894 aa8.01□□□□□ -1.13
ATXN3-240ENST00000556339 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
ATXN3-240ENST00000556339 LMOD2Q6P5Q4 547 aa8□□□□□ -1.13
ATXN3-240ENST00000556339 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
ATXN3-240ENST00000556339 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
ATXN3-240ENST00000556339 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
ATXN3-240ENST00000556339 BRICD5Q6PL45 260 aa7.99□□□□□ -1.13
ATXN3-240ENST00000556339 VSIG10Q8N0Z9 540 aa7.99□□□□□ -1.13
ATXN3-240ENST00000556339 CYP4X1Q8N118 509 aa7.99□□□□□ -1.13
ATXN3-240ENST00000556339 KRI1Q8N9T8 703 aaKnown RBP7.99□□□□□ -1.13
ATXN3-240ENST00000556339 KDM4AO75164 1064 aa7.98□□□□□ -1.13
ATXN3-240ENST00000556339 PKD2L1Q9P0L9 805 aa7.98□□□□□ -1.13
ATXN3-240ENST00000556339 IRF6O14896 467 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms