RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
SCFD1-218ENST00000556256 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-218ENST00000556256 DNAJB2P25686 324 aa10.89□□□□□ -0.67
SCFD1-218ENST00000556256 SLC19A1P41440 591 aa10.89□□□□□ -0.67
SCFD1-218ENST00000556256 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
SCFD1-218ENST00000556256 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
SCFD1-218ENST00000556256 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
SCFD1-218ENST00000556256 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
SCFD1-218ENST00000556256 TLL1O43897 1013 aa10.86□□□□□ -0.67
SCFD1-218ENST00000556256 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
SCFD1-218ENST00000556256 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
SCFD1-218ENST00000556256 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
SCFD1-218ENST00000556256 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
SCFD1-218ENST00000556256 PPEF1O14829 653 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-218ENST00000556256 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
SCFD1-218ENST00000556256 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
SCFD1-218ENST00000556256 SPRYD7Q5W111 196 aa10.83□□□□□ -0.68
SCFD1-218ENST00000556256 ANKLE1Q8NAG6 615 aa10.83□□□□□ -0.68
SCFD1-218ENST00000556256 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
SCFD1-218ENST00000556256 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
SCFD1-218ENST00000556256 S1PR4O95977 384 aa10.81□□□□□ -0.68
SCFD1-218ENST00000556256 CFHP08603 1231 aa10.81□□□□□ -0.68
SCFD1-218ENST00000556256 SLC10A3P09131 477 aa10.81□□□□□ -0.68
SCFD1-218ENST00000556256 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
SCFD1-218ENST00000556256 ZNF775Q96BV0 537 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-218ENST00000556256 MYT1Q01538 1121 aa10.78□□□□□ -0.68
SCFD1-218ENST00000556256 PKDCCQ504Y2 493 aa10.78□□□□□ -0.68
SCFD1-218ENST00000556256 DGAT1O75907 488 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 PRR20EP86478 221 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 PRR20CP86479 221 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 PRR20DP86480 221 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 PRR20BP86481 221 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 PRR20AP86496 221 aa10.77□□□□□ -0.69
SCFD1-218ENST00000556256 NR1I2O75469 434 aa10.76□□□□□ -0.69
SCFD1-218ENST00000556256 ADH1BP00325 375 aa10.76□□□□□ -0.69
SCFD1-218ENST00000556256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
SCFD1-218ENST00000556256 FCHSD2O94868 740 aa10.75□□□□□ -0.69
SCFD1-218ENST00000556256 ZNF697Q5TEC3 545 aa10.75□□□□□ -0.69
SCFD1-218ENST00000556256 SCUBE3Q8IX30 993 aa10.74□□□□□ -0.69
SCFD1-218ENST00000556256 POTECB2RU33 542 aa10.73□□□□□ -0.69
SCFD1-218ENST00000556256 GDF9O60383 454 aa10.73□□□□□ -0.69
SCFD1-218ENST00000556256 SLC6A16Q9GZN6 736 aa10.73□□□□□ -0.69
SCFD1-218ENST00000556256 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
SCFD1-218ENST00000556256 OATP04181 439 aa10.72□□□□□ -0.69
SCFD1-218ENST00000556256 PLA2G2CQ5R387 149 aa10.72□□□□□ -0.69
SCFD1-218ENST00000556256 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
SCFD1-218ENST00000556256 SEMA3EO15041 775 aa10.71□□□□□ -0.69
SCFD1-218ENST00000556256 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
SCFD1-218ENST00000556256 FAM187AA6NFU0 413 aa10.69□□□□□ -0.7
SCFD1-218ENST00000556256 RSPH4AQ5TD94 716 aa10.68□□□□□ -0.7
SCFD1-218ENST00000556256 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
SCFD1-218ENST00000556256 SPSB2Q99619 263 aa10.67□□□□□ -0.7
SCFD1-218ENST00000556256 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
SCFD1-218ENST00000556256 PKD2L1Q9P0L9 805 aa10.65□□□□□ -0.7
SCFD1-218ENST00000556256 HIC1Q14526 733 aa10.64□□□□□ -0.71
SCFD1-218ENST00000556256 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
SCFD1-218ENST00000556256 FOXC1Q12948 553 aa10.63□□□□□ -0.71
SCFD1-218ENST00000556256 FECHP22830 423 aa10.62□□□□□ -0.71
SCFD1-218ENST00000556256 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
SCFD1-218ENST00000556256 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
SCFD1-218ENST00000556256 MORN1Q5T089 497 aa10.6□□□□□ -0.71
SCFD1-218ENST00000556256 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-218ENST00000556256 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
SCFD1-218ENST00000556256 RDH13Q8NBN7 331 aa10.59□□□□□ -0.71
SCFD1-218ENST00000556256 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
SCFD1-218ENST00000556256 RPIAP49247 311 aa10.58□□□□□ -0.72
SCFD1-218ENST00000556256 FUT2Q10981 343 aa10.58□□□□□ -0.72
SCFD1-218ENST00000556256 TESPA1A2RU30 521 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-218ENST00000556256 GNPATO15228 680 aa10.57□□□□□ -0.72
SCFD1-218ENST00000556256 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
SCFD1-218ENST00000556256 FAM160A2Q8N612 972 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-218ENST00000556256 NLRP7Q8WX94 980 aa10.57□□□□□ -0.72
SCFD1-218ENST00000556256 FCF1Q9Y324 198 aaKnown RBP10.57□□□□□ -0.72
SCFD1-218ENST00000556256 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
SCFD1-218ENST00000556256 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
SCFD1-218ENST00000556256 SLC27A5Q9Y2P5 690 aa10.56□□□□□ -0.72
SCFD1-218ENST00000556256 TOR4AQ9NXH8 423 aa10.55□□□□□ -0.72
SCFD1-218ENST00000556256 DACH1Q9UI36 760 aa10.55□□□□□ -0.72
SCFD1-218ENST00000556256 GPR37O15354 613 aa10.54□□□□□ -0.72
SCFD1-218ENST00000556256 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-218ENST00000556256 GCGRP47871 477 aa10.54□□□□□ -0.72
SCFD1-218ENST00000556256 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
SCFD1-218ENST00000556256 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
SCFD1-218ENST00000556256 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
SCFD1-218ENST00000556256 AVPP01185 164 aa10.52□□□□□ -0.73
SCFD1-218ENST00000556256 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-218ENST00000556256 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
SCFD1-218ENST00000556256 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
SCFD1-218ENST00000556256 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-218ENST00000556256 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
SCFD1-218ENST00000556256 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
SCFD1-218ENST00000556256 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
SCFD1-218ENST00000556256 AXIN1O15169 862 aa10.48□□□□□ -0.73
SCFD1-218ENST00000556256 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
SCFD1-218ENST00000556256 RNF19BQ6ZMZ0 732 aa10.46□□□□□ -0.73
SCFD1-218ENST00000556256 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-218ENST00000556256 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
SCFD1-218ENST00000556256 MSS51Q4VC12 460 aa10.45□□□□□ -0.74
SCFD1-218ENST00000556256 TTC24A2A3L6 582 aaPredicted RBP10.44□□□□□ -0.74
SCFD1-218ENST00000556256 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms