RNA–Protein interactions for RNA: ENST00000555933.1

TRIM9-205, Transcript of tripartite motif containing 9, humanhuman

TSL 3

Gene TRIM9, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-205ENST00000555933 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
TRIM9-205ENST00000555933 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
TRIM9-205ENST00000555933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
TRIM9-205ENST00000555933 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
TRIM9-205ENST00000555933 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
TRIM9-205ENST00000555933 MTRQ99707 1265 aa12.22□□□□□ -0.45
TRIM9-205ENST00000555933 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
TRIM9-205ENST00000555933 RGS20O76081 388 aa12.16□□□□□ -0.46
TRIM9-205ENST00000555933 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
TRIM9-205ENST00000555933 SLC10A3P09131 477 aa12.15□□□□□ -0.46
TRIM9-205ENST00000555933 ZNF516Q92618 1163 aa12.15□□□□□ -0.46
TRIM9-205ENST00000555933 COPS2P61201 443 aa12.13□□□□□ -0.47
TRIM9-205ENST00000555933 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
TRIM9-205ENST00000555933 CFHP08603 1231 aa12.12□□□□□ -0.47
TRIM9-205ENST00000555933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIM9-205ENST00000555933 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
TRIM9-205ENST00000555933 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
TRIM9-205ENST00000555933 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
TRIM9-205ENST00000555933 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
TRIM9-205ENST00000555933 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
TRIM9-205ENST00000555933 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
TRIM9-205ENST00000555933 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
TRIM9-205ENST00000555933 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
TRIM9-205ENST00000555933 ZPR1O75312 459 aa12.06□□□□□ -0.48
TRIM9-205ENST00000555933 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
TRIM9-205ENST00000555933 IRF6O14896 467 aa12.05□□□□□ -0.48
TRIM9-205ENST00000555933 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
TRIM9-205ENST00000555933 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
TRIM9-205ENST00000555933 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
TRIM9-205ENST00000555933 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
TRIM9-205ENST00000555933 RDH13Q8NBN7 331 aa12.03□□□□□ -0.48
TRIM9-205ENST00000555933 TLL1O43897 1013 aa12□□□□□ -0.49
TRIM9-205ENST00000555933 SULF1Q8IWU6 871 aa12□□□□□ -0.49
TRIM9-205ENST00000555933 CCDC102AQ96A19 550 aa12□□□□□ -0.49
TRIM9-205ENST00000555933 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
TRIM9-205ENST00000555933 NR1I2O75469 434 aa11.97□□□□□ -0.49
TRIM9-205ENST00000555933 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
TRIM9-205ENST00000555933 GCGRP47871 477 aa11.96□□□□□ -0.49
TRIM9-205ENST00000555933 GGCXP38435 758 aa11.95□□□□□ -0.5
TRIM9-205ENST00000555933 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
TRIM9-205ENST00000555933 FUT2Q10981 343 aa11.94□□□□□ -0.5
TRIM9-205ENST00000555933 SCUBE3Q8IX30 993 aa11.94□□□□□ -0.5
TRIM9-205ENST00000555933 ZC3H15Q8WU90 426 aaKnown RBP11.94□□□□□ -0.5
TRIM9-205ENST00000555933 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
TRIM9-205ENST00000555933 ZMYND10O75800 440 aa11.93□□□□□ -0.5
TRIM9-205ENST00000555933 BARGINQ6ZT62 677 aa11.93□□□□□ -0.5
TRIM9-205ENST00000555933 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
TRIM9-205ENST00000555933 CD46P15529 392 aa11.92□□□□□ -0.5
TRIM9-205ENST00000555933 MORN1Q5T089 497 aa11.92□□□□□ -0.5
TRIM9-205ENST00000555933 PRKD2Q9BZL6 878 aa11.92□□□□□ -0.5
TRIM9-205ENST00000555933 ADH1BP00325 375 aa11.91□□□□□ -0.5
TRIM9-205ENST00000555933 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
TRIM9-205ENST00000555933 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
TRIM9-205ENST00000555933 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
TRIM9-205ENST00000555933 S1PR4O95977 384 aa11.89□□□□□ -0.51
TRIM9-205ENST00000555933 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
TRIM9-205ENST00000555933 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
TRIM9-205ENST00000555933 CLCN1P35523 988 aa11.87□□□□□ -0.51
TRIM9-205ENST00000555933 SPSB2Q99619 263 aa11.87□□□□□ -0.51
TRIM9-205ENST00000555933 SLC27A5Q9Y2P5 690 aa11.87□□□□□ -0.51
TRIM9-205ENST00000555933 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
TRIM9-205ENST00000555933 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
TRIM9-205ENST00000555933 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
TRIM9-205ENST00000555933 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
TRIM9-205ENST00000555933 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
TRIM9-205ENST00000555933 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
TRIM9-205ENST00000555933 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
TRIM9-205ENST00000555933 KDM4AO75164 1064 aa11.82□□□□□ -0.52
TRIM9-205ENST00000555933 GRIPAP1Q4V328 841 aa11.82□□□□□ -0.52
TRIM9-205ENST00000555933 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
TRIM9-205ENST00000555933 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
TRIM9-205ENST00000555933 BRICD5Q6PL45 260 aa11.8□□□□□ -0.52
TRIM9-205ENST00000555933 AMHR2Q16671 573 aa11.79□□□□□ -0.52
TRIM9-205ENST00000555933 RNF19BQ6ZMZ0 732 aa11.79□□□□□ -0.52
TRIM9-205ENST00000555933 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
TRIM9-205ENST00000555933 SLC19A1P41440 591 aa11.78□□□□□ -0.52
TRIM9-205ENST00000555933 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
TRIM9-205ENST00000555933 USP46P62068 366 aa11.77□□□□□ -0.53
TRIM9-205ENST00000555933 TTLL12Q14166 644 aaPredicted RBP11.77□□□□□ -0.53
TRIM9-205ENST00000555933 HLA-CQ95604 372 aa11.77□□□□□ -0.53
TRIM9-205ENST00000555933 HOXA2O43364 376 aa11.76□□□□□ -0.53
TRIM9-205ENST00000555933 GFRA3O60609 400 aa11.76□□□□□ -0.53
TRIM9-205ENST00000555933 PLA2G2CQ5R387 149 aa11.76□□□□□ -0.53
TRIM9-205ENST00000555933 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
TRIM9-205ENST00000555933 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
TRIM9-205ENST00000555933 Q3C1V9 767 aa11.75□□□□□ -0.53
TRIM9-205ENST00000555933 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
TRIM9-205ENST00000555933 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
TRIM9-205ENST00000555933 TRIM66O15016 1216 aa11.73□□□□□ -0.53
TRIM9-205ENST00000555933 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
TRIM9-205ENST00000555933 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
TRIM9-205ENST00000555933 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
TRIM9-205ENST00000555933 Q6ZNB5 142 aa11.72□□□□□ -0.53
TRIM9-205ENST00000555933 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
TRIM9-205ENST00000555933 AK7Q96M32 723 aa11.72□□□□□ -0.53
TRIM9-205ENST00000555933 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
TRIM9-205ENST00000555933 FCF1Q9Y324 198 aaKnown RBP11.71□□□□□ -0.53
TRIM9-205ENST00000555933 NRG2O14511 850 aaPredicted RBP11.7□□□□□ -0.54
TRIM9-205ENST00000555933 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
TRIM9-205ENST00000555933 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms