RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
SLIRP-204ENST00000555890 NEURL4Q96JN8 1562 aa10.39□□□□□ -0.75
SLIRP-204ENST00000555890 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
SLIRP-204ENST00000555890 ZNF142P52746 1687 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-204ENST00000555890 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
SLIRP-204ENST00000555890 R3HDM1Q15032 1099 aaKnown RBP10.38□□□□□ -0.75
SLIRP-204ENST00000555890 PPP1R1BQ9UD71 204 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-204ENST00000555890 NINLQ9Y2I6 1382 aa10.38□□□□□ -0.75
SLIRP-204ENST00000555890 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
SLIRP-204ENST00000555890 PLCH2O75038 1416 aa10.37□□□□□ -0.75
SLIRP-204ENST00000555890 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
SLIRP-204ENST00000555890 NPHP4O75161 1426 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-204ENST00000555890 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-204ENST00000555890 AGLP35573 1532 aa10.36□□□□□ -0.75
SLIRP-204ENST00000555890 SUPT6HQ7KZ85 1726 aaKnown RBP10.36□□□□□ -0.75
SLIRP-204ENST00000555890 CLCN6P51797 869 aa10.35□□□□□ -0.75
SLIRP-204ENST00000555890 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
SLIRP-204ENST00000555890 WWC3Q9ULE0 1092 aa10.35□□□□□ -0.75
SLIRP-204ENST00000555890 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-204ENST00000555890 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
SLIRP-204ENST00000555890 C8orf37Q96NL8 207 aa10.34□□□□□ -0.75
SLIRP-204ENST00000555890 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 MYO3AQ8NEV4 1616 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 NBR1Q14596 966 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 LRRC9Q6ZRR7 1453 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 REREQ9P2R6 1566 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 DIP2CQ9Y2E4 1556 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
SLIRP-204ENST00000555890 KDM5CP41229 1560 aa10.32□□□□□ -0.76
SLIRP-204ENST00000555890 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
SLIRP-204ENST00000555890 SCAF11Q99590 1463 aaKnown RBP10.32□□□□□ -0.76
SLIRP-204ENST00000555890 UTRNP46939 3433 aa10.32□□□□□ -0.76
SLIRP-204ENST00000555890 MED14O60244 1454 aa10.31□□□□□ -0.76
SLIRP-204ENST00000555890 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
SLIRP-204ENST00000555890 EFCAB2Q5VUJ9 269 aa10.3□□□□□ -0.76
SLIRP-204ENST00000555890 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
SLIRP-204ENST00000555890 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
SLIRP-204ENST00000555890 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
SLIRP-204ENST00000555890 KDM5DQ9BY66 1539 aa10.29□□□□□ -0.76
SLIRP-204ENST00000555890 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
SLIRP-204ENST00000555890 TRPC5Q9UL62 973 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-204ENST00000555890 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
SLIRP-204ENST00000555890 POLR1AO95602 1720 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-204ENST00000555890 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
SLIRP-204ENST00000555890 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
SLIRP-204ENST00000555890 STRCP1A6NGW2 1772 aa10.28□□□□□ -0.76
SLIRP-204ENST00000555890 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
SLIRP-204ENST00000555890 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
SLIRP-204ENST00000555890 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
SLIRP-204ENST00000555890 DNMT1P26358 1616 aaKnown RBP10.27□□□□□ -0.77
SLIRP-204ENST00000555890 BAG6P46379 1132 aa10.27□□□□□ -0.77
SLIRP-204ENST00000555890 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
SLIRP-204ENST00000555890 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-204ENST00000555890 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
SLIRP-204ENST00000555890 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-204ENST00000555890 FYCO1Q9BQS8 1478 aa10.26□□□□□ -0.77
SLIRP-204ENST00000555890 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
SLIRP-204ENST00000555890 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
SLIRP-204ENST00000555890 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
SLIRP-204ENST00000555890 DNAJC5GQ8N7S2 189 aa10.25□□□□□ -0.77
SLIRP-204ENST00000555890 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
SLIRP-204ENST00000555890 ZEB1P37275 1124 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-204ENST00000555890 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-204ENST00000555890 MROH2AA6NES4 1674 aa10.24□□□□□ -0.77
SLIRP-204ENST00000555890 MYO5CQ9NQX4 1742 aa10.24□□□□□ -0.77
SLIRP-204ENST00000555890 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-204ENST00000555890 SPON1Q9HCB6 807 aa10.23□□□□□ -0.77
SLIRP-204ENST00000555890 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
SLIRP-204ENST00000555890 KIDINS220Q9ULH0 1771 aa10.22□□□□□ -0.77
SLIRP-204ENST00000555890 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
SLIRP-204ENST00000555890 USP21Q9UK80 565 aa10.22□□□□□ -0.77
SLIRP-204ENST00000555890 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
SLIRP-204ENST00000555890 KIF14Q15058 1648 aa10.22□□□□□ -0.77
SLIRP-204ENST00000555890 APLP1P51693 650 aa10.21□□□□□ -0.77
SLIRP-204ENST00000555890 SHPRHQ149N8 1683 aa10.21□□□□□ -0.78
SLIRP-204ENST00000555890 CAMTA1Q9Y6Y1 1673 aa10.2□□□□□ -0.78
SLIRP-204ENST00000555890 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
SLIRP-204ENST00000555890 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
SLIRP-204ENST00000555890 GSE1Q14687 1217 aa10.18□□□□□ -0.78
SLIRP-204ENST00000555890 ABCC1P33527 1531 aa10.17□□□□□ -0.78
SLIRP-204ENST00000555890 ARHGAP5Q13017 1502 aa10.17□□□□□ -0.78
SLIRP-204ENST00000555890 KCNQ2O43526 872 aa10.17□□□□□ -0.78
SLIRP-204ENST00000555890 CLTCQ00610 1675 aaKnown RBP10.17□□□□□ -0.78
SLIRP-204ENST00000555890 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
SLIRP-204ENST00000555890 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
SLIRP-204ENST00000555890 IQGAP1P46940 1657 aa10.16□□□□□ -0.78
SLIRP-204ENST00000555890 LRRIQ1Q96JM4 1722 aa10.16□□□□□ -0.78
SLIRP-204ENST00000555890 RRBP1Q9P2E9 1410 aaKnown RBP10.16□□□□□ -0.78
SLIRP-204ENST00000555890 POTEMA6NI47 508 aa10.15□□□□□ -0.78
SLIRP-204ENST00000555890 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-204ENST00000555890 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.79
SLIRP-204ENST00000555890 XIRP1Q702N8 1843 aaKnown RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 MLLT1Q03111 559 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
SLIRP-204ENST00000555890 CCER1Q8TC90 406 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 ATRNO75882 1429 aa10.14□□□□□ -0.79
SLIRP-204ENST00000555890 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-204ENST00000555890 MSH6P52701 1360 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms