RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
GPHN-208ENST00000555503 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
GPHN-208ENST00000555503 HOMEZQ8IX15 550 aa11.17□□□□□ -0.62
GPHN-208ENST00000555503 NPATQ14207 1427 aa11.17□□□□□ -0.62
GPHN-208ENST00000555503 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
GPHN-208ENST00000555503 ZMYM3Q14202 1370 aa11.16□□□□□ -0.62
GPHN-208ENST00000555503 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
GPHN-208ENST00000555503 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
GPHN-208ENST00000555503 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
GPHN-208ENST00000555503 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
GPHN-208ENST00000555503 CEP152O94986 1710 aa11.15□□□□□ -0.62
GPHN-208ENST00000555503 CAMSAP2Q08AD1 1489 aa11.15□□□□□ -0.62
GPHN-208ENST00000555503 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
GPHN-208ENST00000555503 GGT6Q6P531 493 aa11.15□□□□□ -0.62
GPHN-208ENST00000555503 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.63
GPHN-208ENST00000555503 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
GPHN-208ENST00000555503 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
GPHN-208ENST00000555503 PTPRKQ15262 1439 aa11.14□□□□□ -0.63
GPHN-208ENST00000555503 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
GPHN-208ENST00000555503 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
GPHN-208ENST00000555503 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
GPHN-208ENST00000555503 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
GPHN-208ENST00000555503 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
GPHN-208ENST00000555503 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
GPHN-208ENST00000555503 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
GPHN-208ENST00000555503 IQSEC2Q5JU85 1478 aa11.11□□□□□ -0.63
GPHN-208ENST00000555503 CCDC141Q6ZP82 1450 aa11.11□□□□□ -0.63
GPHN-208ENST00000555503 ILDR2Q71H61 639 aa11.1□□□□□ -0.63
GPHN-208ENST00000555503 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
GPHN-208ENST00000555503 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
GPHN-208ENST00000555503 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
GPHN-208ENST00000555503 CROCC2H7BZ55 1655 aa11.1□□□□□ -0.63
GPHN-208ENST00000555503 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
GPHN-208ENST00000555503 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
GPHN-208ENST00000555503 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
GPHN-208ENST00000555503 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
GPHN-208ENST00000555503 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
GPHN-208ENST00000555503 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
GPHN-208ENST00000555503 E2F4Q16254 413 aa11.07□□□□□ -0.64
GPHN-208ENST00000555503 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
GPHN-208ENST00000555503 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
GPHN-208ENST00000555503 KIF3BO15066 747 aa11.06□□□□□ -0.64
GPHN-208ENST00000555503 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
GPHN-208ENST00000555503 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
GPHN-208ENST00000555503 PZPP20742 1482 aa11.06□□□□□ -0.64
GPHN-208ENST00000555503 DHX29Q7Z478 1369 aaKnown RBP11.05□□□□□ -0.64
GPHN-208ENST00000555503 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
GPHN-208ENST00000555503 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
GPHN-208ENST00000555503 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
GPHN-208ENST00000555503 MAST1Q9Y2H9 1570 aa11.05□□□□□ -0.64
GPHN-208ENST00000555503 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
GPHN-208ENST00000555503 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
GPHN-208ENST00000555503 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
GPHN-208ENST00000555503 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
GPHN-208ENST00000555503 TNRQ92752 1358 aa11.04□□□□□ -0.64
GPHN-208ENST00000555503 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
GPHN-208ENST00000555503 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
GPHN-208ENST00000555503 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
GPHN-208ENST00000555503 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 UGGT1Q9NYU2 1555 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 SEMA3EO15041 775 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 PSEN1P49768 467 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 LRRC9Q6ZRR7 1453 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 ABCC3O15438 1527 aa11.03□□□□□ -0.64
GPHN-208ENST00000555503 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
GPHN-208ENST00000555503 PPP1R37O75864 691 aa11.02□□□□□ -0.65
GPHN-208ENST00000555503 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
GPHN-208ENST00000555503 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
GPHN-208ENST00000555503 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
GPHN-208ENST00000555503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
GPHN-208ENST00000555503 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
GPHN-208ENST00000555503 CPS1P31327 1500 aa11□□□□□ -0.65
GPHN-208ENST00000555503 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
GPHN-208ENST00000555503 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
GPHN-208ENST00000555503 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
GPHN-208ENST00000555503 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
GPHN-208ENST00000555503 SOCS7O14512 581 aa10.99□□□□□ -0.65
GPHN-208ENST00000555503 ZMYND10O75800 440 aa10.99□□□□□ -0.65
GPHN-208ENST00000555503 NLRP1Q9C000 1473 aa10.99□□□□□ -0.65
GPHN-208ENST00000555503 SYNMO15061 1565 aa10.99□□□□□ -0.65
GPHN-208ENST00000555503 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
GPHN-208ENST00000555503 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
GPHN-208ENST00000555503 LOC105371045A0A1W2PR82 267 aa10.98□□□□□ -0.65
GPHN-208ENST00000555503 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
GPHN-208ENST00000555503 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 NLRP6P59044 892 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
GPHN-208ENST00000555503 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
GPHN-208ENST00000555503 NPHP4O75161 1426 aaPredicted RBP10.96□□□□□ -0.65
GPHN-208ENST00000555503 MYOM3Q5VTT5 1437 aa10.96□□□□□ -0.65
GPHN-208ENST00000555503 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
GPHN-208ENST00000555503 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
GPHN-208ENST00000555503 SOX12O15370 315 aa10.95□□□□□ -0.66
GPHN-208ENST00000555503 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
GPHN-208ENST00000555503 MED14O60244 1454 aa10.94□□□□□ -0.66
GPHN-208ENST00000555503 HSPA1LP34931 641 aa10.94□□□□□ -0.66
GPHN-208ENST00000555503 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms