RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-230ENST00000554673 ATP1B4Q9UN42 357 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-230ENST00000554673 CCNB3Q8WWL7 1395 aa9.06□□□□□ -0.96
ATXN3-230ENST00000554673 PTGER2P43116 358 aa9.05□□□□□ -0.96
ATXN3-230ENST00000554673 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
ATXN3-230ENST00000554673 ZNF644Q9H582 1327 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-230ENST00000554673 ITSN2Q9NZM3 1697 aa9.04□□□□□ -0.96
ATXN3-230ENST00000554673 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
ATXN3-230ENST00000554673 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-230ENST00000554673 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-230ENST00000554673 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
ATXN3-230ENST00000554673 DAXXQ9UER7 740 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-230ENST00000554673 ARHGEF12Q9NZN5 1544 aa9.04□□□□□ -0.96
ATXN3-230ENST00000554673 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
ATXN3-230ENST00000554673 GCC2Q8IWJ2 1684 aa9.04□□□□□ -0.96
ATXN3-230ENST00000554673 DENND4BO75064 1496 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-230ENST00000554673 MYO5CQ9NQX4 1742 aa9.03□□□□□ -0.96
ATXN3-230ENST00000554673 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-230ENST00000554673 ARXQ96QS3 562 aa9.03□□□□□ -0.96
ATXN3-230ENST00000554673 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.96
ATXN3-230ENST00000554673 KIF13AQ9H1H9 1805 aa9.02□□□□□ -0.97
ATXN3-230ENST00000554673 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.97
ATXN3-230ENST00000554673 RGL2O15211 777 aa9.01□□□□□ -0.97
ATXN3-230ENST00000554673 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-230ENST00000554673 ABCC5O15440 1437 aa9□□□□□ -0.97
ATXN3-230ENST00000554673 NLRP6P59044 892 aa9□□□□□ -0.97
ATXN3-230ENST00000554673 MBD5Q9P267 1494 aa9□□□□□ -0.97
ATXN3-230ENST00000554673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
ATXN3-230ENST00000554673 NUDT7P0C024 238 aa8.99□□□□□ -0.97
ATXN3-230ENST00000554673 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
ATXN3-230ENST00000554673 MAPKBP1O60336 1514 aa8.99□□□□□ -0.97
ATXN3-230ENST00000554673 ASXL2Q76L83 1435 aa8.98□□□□□ -0.97
ATXN3-230ENST00000554673 ADGBQ8N7X0 1667 aa8.98□□□□□ -0.97
ATXN3-230ENST00000554673 WDR7Q9Y4E6 1490 aa8.98□□□□□ -0.97
ATXN3-230ENST00000554673 MIA2Q96PC5 1412 aa8.97□□□□□ -0.97
ATXN3-230ENST00000554673 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-230ENST00000554673 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
ATXN3-230ENST00000554673 MAP3K4Q9Y6R4 1608 aa8.97□□□□□ -0.97
ATXN3-230ENST00000554673 NAIPQ13075 1403 aa8.97□□□□□ -0.97
ATXN3-230ENST00000554673 ABCC1P33527 1531 aa8.96□□□□□ -0.97
ATXN3-230ENST00000554673 SYCP2Q9BX26 1530 aa8.96□□□□□ -0.97
ATXN3-230ENST00000554673 ARHGEF5Q12774 1597 aa8.96□□□□□ -0.97
ATXN3-230ENST00000554673 NBR1Q14596 966 aa8.96□□□□□ -0.98
ATXN3-230ENST00000554673 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
ATXN3-230ENST00000554673 DAPK1P53355 1430 aa8.96□□□□□ -0.98
ATXN3-230ENST00000554673 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
ATXN3-230ENST00000554673 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
ATXN3-230ENST00000554673 SIGLEC1Q9BZZ2 1709 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 C2orf72A6NCS6 295 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 DHX57Q6P158 1386 aaKnown RBP8.94□□□□□ -0.98
ATXN3-230ENST00000554673 RAB3GAP2Q9H2M9 1393 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 FRMPD1Q5SYB0 1578 aa8.94□□□□□ -0.98
ATXN3-230ENST00000554673 HRCP23327 699 aa8.93□□□□□ -0.98
ATXN3-230ENST00000554673 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
ATXN3-230ENST00000554673 AKNAQ7Z591 1439 aa8.93□□□□□ -0.98
ATXN3-230ENST00000554673 MAST1Q9Y2H9 1570 aa8.93□□□□□ -0.98
ATXN3-230ENST00000554673 ARAP3Q8WWN8 1544 aa8.92□□□□□ -0.98
ATXN3-230ENST00000554673 ADGRL2O95490 1459 aa8.92□□□□□ -0.98
ATXN3-230ENST00000554673 PLCH2O75038 1416 aa8.92□□□□□ -0.98
ATXN3-230ENST00000554673 TRAPPC8Q9Y2L5 1435 aa8.92□□□□□ -0.98
ATXN3-230ENST00000554673 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
ATXN3-230ENST00000554673 INO80Q9ULG1 1556 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-230ENST00000554673 HFM1A2PYH4 1435 aa8.91□□□□□ -0.98
ATXN3-230ENST00000554673 ITGAEP38570 1179 aa8.91□□□□□ -0.98
ATXN3-230ENST00000554673 FAM50AQ14320 339 aaKnown RBP8.91□□□□□ -0.98
ATXN3-230ENST00000554673 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
ATXN3-230ENST00000554673 RICTORQ6R327 1708 aa8.91□□□□□ -0.98
ATXN3-230ENST00000554673 GLI2P10070 1586 aa8.9□□□□□ -0.98
ATXN3-230ENST00000554673 TSPOAP1O95153 1857 aa8.9□□□□□ -0.98
ATXN3-230ENST00000554673 PBX2P40425 430 aa8.9□□□□□ -0.98
ATXN3-230ENST00000554673 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
ATXN3-230ENST00000554673 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
ATXN3-230ENST00000554673 ARHGAP5Q13017 1502 aa8.9□□□□□ -0.99
ATXN3-230ENST00000554673 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
ATXN3-230ENST00000554673 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
ATXN3-230ENST00000554673 STK25O00506 426 aa8.89□□□□□ -0.99
ATXN3-230ENST00000554673 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
ATXN3-230ENST00000554673 MROH1Q8NDA8 1641 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 PLXNC1O60486 1568 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 KIF3CO14782 793 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 PZPP20742 1482 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
ATXN3-230ENST00000554673 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
ATXN3-230ENST00000554673 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
ATXN3-230ENST00000554673 HCSTQ9UBK5 93 aa8.87□□□□□ -0.99
ATXN3-230ENST00000554673 COL17A1Q9UMD9 1497 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-230ENST00000554673 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
ATXN3-230ENST00000554673 HNRNPMP52272 730 aaKnown RBP eCLIP8.86□□□□□ -0.99
ATXN3-230ENST00000554673 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
ATXN3-230ENST00000554673 ABCA6Q8N139 1617 aa8.86□□□□□ -0.99
ATXN3-230ENST00000554673 KDM5CP41229 1560 aa8.86□□□□□ -0.99
ATXN3-230ENST00000554673 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
ATXN3-230ENST00000554673 RRP7BPQ9NSQ0 103 aa8.85□□□□□ -0.99
ATXN3-230ENST00000554673 C9orf84Q5VXU9 1444 aa8.85□□□□□ -0.99
ATXN3-230ENST00000554673 UNC13BO14795 1591 aa8.85□□□□□ -0.99
ATXN3-230ENST00000554673 ROCK1Q13464 1354 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms