RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 EFCAB6Q5THR3 1501 aa27.21■■□□□ 1.95
NEK9-204ENST00000554258 SETBP1Q9Y6X0 1596 aa27.18■■□□□ 1.94
NEK9-204ENST00000554258 ARHGAP31Q2M1Z3 1444 aa27.17■■□□□ 1.94
NEK9-204ENST00000554258 BCANQ96GW7 911 aa27.17■■□□□ 1.94
NEK9-204ENST00000554258 RBM6P78332 1123 aaKnown RBP27.16■■□□□ 1.94
NEK9-204ENST00000554258 CHD2O14647 1828 aaKnown RBP27.14■■□□□ 1.94
NEK9-204ENST00000554258 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
NEK9-204ENST00000554258 C14orf37Q86TY3 774 aa27.13■■□□□ 1.93
NEK9-204ENST00000554258 QTRT2Q9H974 415 aaKnown RBP27.12■■□□□ 1.93
NEK9-204ENST00000554258 DIP2AQ14689 1571 aa27.12■■□□□ 1.93
NEK9-204ENST00000554258 MAST1Q9Y2H9 1570 aa27.11■■□□□ 1.93
NEK9-204ENST00000554258 EP400Q96L91 3159 aa27.09■■□□□ 1.93
NEK9-204ENST00000554258 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.07■■□□□ 1.92
NEK9-204ENST00000554258 IDI1Q13907 227 aa27.07■■□□□ 1.92
NEK9-204ENST00000554258 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
NEK9-204ENST00000554258 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
NEK9-204ENST00000554258 NCOA3Q9Y6Q9 1424 aa27.06■■□□□ 1.92
NEK9-204ENST00000554258 ATF3P18847 181 aa27.05■■□□□ 1.92
NEK9-204ENST00000554258 NGLY1Q96IV0 654 aa27.04■■□□□ 1.92
NEK9-204ENST00000554258 DUOX2Q9NRD8 1548 aa27.02■■□□□ 1.92
NEK9-204ENST00000554258 ADGRB3O60242 1522 aa27.01■■□□□ 1.91
NEK9-204ENST00000554258 BRINP3Q76B58 766 aa27■■□□□ 1.91
NEK9-204ENST00000554258 C19orf44Q9H6X5 657 aa27■■□□□ 1.91
NEK9-204ENST00000554258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.98■■□□□ 1.912e-6■□□□□ 10.2
NEK9-204ENST00000554258 SETD5Q9C0A6 1442 aa26.96■■□□□ 1.91
NEK9-204ENST00000554258 PLEKHG1Q9ULL1 1385 aa26.95■■□□□ 1.9
NEK9-204ENST00000554258 KANK1Q14678 1352 aa26.93■■□□□ 1.9
NEK9-204ENST00000554258 ASXL1Q8IXJ9 1541 aa26.92■■□□□ 1.9
NEK9-204ENST00000554258 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
NEK9-204ENST00000554258 CCDC125Q86Z20 511 aa26.91■■□□□ 1.9
NEK9-204ENST00000554258 LRRC59Q96AG4 307 aaKnown RBP26.91■■□□□ 1.9
NEK9-204ENST00000554258 NHSL1Q5SYE7 1610 aa26.9■■□□□ 1.9
NEK9-204ENST00000554258 MYO5BQ9ULV0 1848 aa26.9■■□□□ 1.9
NEK9-204ENST00000554258 TBX22Q9Y458 520 aa26.89■■□□□ 1.9
NEK9-204ENST00000554258 ERBINQ96RT1 1412 aa26.89■■□□□ 1.89
NEK9-204ENST00000554258 ZFYVE9O95405 1425 aa26.88■■□□□ 1.89
NEK9-204ENST00000554258 KIF15Q9NS87 1388 aa26.87■■□□□ 1.89
NEK9-204ENST00000554258 PNPLA6Q8IY17 1366 aa26.86■■□□□ 1.89
NEK9-204ENST00000554258 ADAMTS2O95450 1211 aa26.86■■□□□ 1.89
NEK9-204ENST00000554258 NOS1P29475 1434 aa26.85■■□□□ 1.89
NEK9-204ENST00000554258 HDGFP51858 240 aaKnown RBP26.85■■□□□ 1.89
NEK9-204ENST00000554258 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
NEK9-204ENST00000554258 LRP5O75197 1615 aa26.84■■□□□ 1.89
NEK9-204ENST00000554258 RIMS2Q9UQ26 1411 aa26.83■■□□□ 1.89
NEK9-204ENST00000554258 USP21Q9UK80 565 aa26.83■■□□□ 1.89
NEK9-204ENST00000554258 TRPC5Q9UL62 973 aaPredicted RBP26.83■■□□□ 1.89
NEK9-204ENST00000554258 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.89
NEK9-204ENST00000554258 DCCP43146 1447 aa26.81■■□□□ 1.88
NEK9-204ENST00000554258 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
NEK9-204ENST00000554258 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
NEK9-204ENST00000554258 PIK3R4Q99570 1358 aa26.78■■□□□ 1.88
NEK9-204ENST00000554258 MST1RQ04912 1400 aa26.76■■□□□ 1.87
NEK9-204ENST00000554258 MYOM3Q5VTT5 1437 aa26.76■■□□□ 1.87
NEK9-204ENST00000554258 ADAMTS13Q76LX8 1427 aa26.76■■□□□ 1.87
NEK9-204ENST00000554258 DDX17Q92841 729 aaKnown RBP26.76■■□□□ 1.87
NEK9-204ENST00000554258 ATRNO75882 1429 aa26.73■■□□□ 1.87
NEK9-204ENST00000554258 AMOTL2Q9Y2J4 779 aa26.73■■□□□ 1.87
NEK9-204ENST00000554258 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
NEK9-204ENST00000554258 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.72■■□□□ 1.87
NEK9-204ENST00000554258 TMEM131LA2VDJ0 1609 aa26.72■■□□□ 1.87
NEK9-204ENST00000554258 TRPM2O94759 1503 aa26.7■■□□□ 1.87
NEK9-204ENST00000554258 FNBP4Q8N3X1 1017 aaPredicted RBP26.7■■□□□ 1.86
NEK9-204ENST00000554258 BLMP54132 1417 aaPredicted RBP26.69■■□□□ 1.86
NEK9-204ENST00000554258 PTCH1Q13635 1447 aa26.66■■□□□ 1.86
NEK9-204ENST00000554258 PTPRUQ92729 1446 aa26.66■■□□□ 1.86
NEK9-204ENST00000554258 DEFB132Q7Z7B7 95 aa26.65■■□□□ 1.86
NEK9-204ENST00000554258 CHGAP10645 457 aaKnown RBP26.64■■□□□ 1.86
NEK9-204ENST00000554258 RPRD2Q5VT52 1461 aaKnown RBP26.63■■□□□ 1.85
NEK9-204ENST00000554258 ABCC5O15440 1437 aa26.62■■□□□ 1.85
NEK9-204ENST00000554258 SF3B2Q13435 895 aaKnown RBP26.61■■□□□ 1.85
NEK9-204ENST00000554258 XRN1Q8IZH2 1706 aaKnown RBP26.6■■□□□ 1.85
NEK9-204ENST00000554258 PSDA5PKW4 1024 aaPredicted RBP26.56■■□□□ 1.84
NEK9-204ENST00000554258 GJD4Q96KN9 370 aaPredicted RBP26.56■■□□□ 1.84
NEK9-204ENST00000554258 LAMC1P11047 1609 aa26.56■■□□□ 1.84
NEK9-204ENST00000554258 BCL9LQ86UU0 1499 aa26.55■■□□□ 1.84
NEK9-204ENST00000554258 UNC13BO14795 1591 aa26.55■■□□□ 1.84
NEK9-204ENST00000554258 ADGRL3Q9HAR2 1447 aa26.55■■□□□ 1.84
NEK9-204ENST00000554258 HRCP23327 699 aa26.54■■□□□ 1.84
NEK9-204ENST00000554258 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
NEK9-204ENST00000554258 COL22A1Q8NFW1 1626 aaPredicted RBP26.53■■□□□ 1.84
NEK9-204ENST00000554258 NALCNQ8IZF0 1738 aa26.53■■□□□ 1.84
NEK9-204ENST00000554258 MARF1Q9Y4F3 1742 aaKnown RBP26.53■■□□□ 1.84
NEK9-204ENST00000554258 BRWD3Q6RI45 1802 aa26.53■■□□□ 1.84
NEK9-204ENST00000554258 DAPK1P53355 1430 aa26.52■■□□□ 1.84
NEK9-204ENST00000554258 SOS2Q07890 1332 aaPredicted RBP26.52■■□□□ 1.84
NEK9-204ENST00000554258 C1orf167Q5SNV9 1468 aa26.5■■□□□ 1.83
NEK9-204ENST00000554258 YY1P25490 414 aa26.5■■□□□ 1.83
NEK9-204ENST00000554258 CHIC2Q9UKJ5 165 aa26.49■■□□□ 1.83
NEK9-204ENST00000554258 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
NEK9-204ENST00000554258 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.47■■□□□ 1.83
NEK9-204ENST00000554258 PTPN23Q9H3S7 1636 aa26.47■■□□□ 1.83
NEK9-204ENST00000554258 MYOM2P54296 1465 aa26.45■■□□□ 1.82
NEK9-204ENST00000554258 NRXN3Q9Y4C0 1643 aa26.45■■□□□ 1.82
NEK9-204ENST00000554258 GLI3P10071 1580 aa26.45■■□□□ 1.82
NEK9-204ENST00000554258 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
NEK9-204ENST00000554258 ORAI2Q96SN7 254 aa26.43■■□□□ 1.82
NEK9-204ENST00000554258 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
NEK9-204ENST00000554258 METP08581 1390 aa26.39■■□□□ 1.82
NEK9-204ENST00000554258 BAG6P46379 1132 aa26.38■■□□□ 1.81
NEK9-204ENST00000554258 UNC5CLQ8IV45 518 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms