RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 CHMP5Q9NZZ3 219 aa13.19□□□□□ -0.3
ITGA7-206ENST00000553804 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
ITGA7-206ENST00000553804 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
ITGA7-206ENST00000553804 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
ITGA7-206ENST00000553804 TMF1P82094 1093 aa13.18□□□□□ -0.3
ITGA7-206ENST00000553804 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
ITGA7-206ENST00000553804 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
ITGA7-206ENST00000553804 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
ITGA7-206ENST00000553804 MPNDQ8N594 471 aa13.17□□□□□ -0.3
ITGA7-206ENST00000553804 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
ITGA7-206ENST00000553804 CLCN1P35523 988 aa13.16□□□□□ -0.3
ITGA7-206ENST00000553804 IGHDP01880 384 aa13.16□□□□□ -0.3
ITGA7-206ENST00000553804 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
ITGA7-206ENST00000553804 ATP10BO94823 1461 aa13.16□□□□□ -0.3
ITGA7-206ENST00000553804 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
ITGA7-206ENST00000553804 C22orf23Q9BZE7 217 aa13.15□□□□□ -0.3
ITGA7-206ENST00000553804 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
ITGA7-206ENST00000553804 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
ITGA7-206ENST00000553804 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
ITGA7-206ENST00000553804 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
ITGA7-206ENST00000553804 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
ITGA7-206ENST00000553804 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
ITGA7-206ENST00000553804 FOXD4L6Q3SYB3 417 aaPredicted RBP13.12□□□□□ -0.31
ITGA7-206ENST00000553804 FOXD4L3Q6VB84 417 aaPredicted RBP13.12□□□□□ -0.31
ITGA7-206ENST00000553804 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
ITGA7-206ENST00000553804 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
ITGA7-206ENST00000553804 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
ITGA7-206ENST00000553804 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
ITGA7-206ENST00000553804 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
ITGA7-206ENST00000553804 ESF1Q9H501 851 aaKnown RBP13.12□□□□□ -0.31
ITGA7-206ENST00000553804 KDM6BO15054 1643 aa13.11□□□□□ -0.31
ITGA7-206ENST00000553804 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
ITGA7-206ENST00000553804 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
ITGA7-206ENST00000553804 TPM2P07951 284 aa13.1□□□□□ -0.31
ITGA7-206ENST00000553804 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
ITGA7-206ENST00000553804 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
ITGA7-206ENST00000553804 APBB1O00213 710 aa13.09□□□□□ -0.31
ITGA7-206ENST00000553804 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
ITGA7-206ENST00000553804 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
ITGA7-206ENST00000553804 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
ITGA7-206ENST00000553804 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
ITGA7-206ENST00000553804 ANKRD30BQ9BXX2 1392 aa13.08□□□□□ -0.32
ITGA7-206ENST00000553804 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
ITGA7-206ENST00000553804 KIF14Q15058 1648 aa13.08□□□□□ -0.32
ITGA7-206ENST00000553804 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
ITGA7-206ENST00000553804 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
ITGA7-206ENST00000553804 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
ITGA7-206ENST00000553804 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
ITGA7-206ENST00000553804 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
ITGA7-206ENST00000553804 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
ITGA7-206ENST00000553804 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
ITGA7-206ENST00000553804 CDK11BP21127 795 aaKnown RBP13.06□□□□□ -0.32
ITGA7-206ENST00000553804 CAVIN1Q6NZI2 390 aaKnown RBP13.06□□□□□ -0.32
ITGA7-206ENST00000553804 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
ITGA7-206ENST00000553804 UQCRHP07919 91 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
ITGA7-206ENST00000553804 E9PSI1 815 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 ABCA8O94911 1581 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
ITGA7-206ENST00000553804 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
ITGA7-206ENST00000553804 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
ITGA7-206ENST00000553804 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
ITGA7-206ENST00000553804 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
ITGA7-206ENST00000553804 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
ITGA7-206ENST00000553804 TNNQ9UQP3 1299 aa13.02□□□□□ -0.32
ITGA7-206ENST00000553804 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
ITGA7-206ENST00000553804 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.33
ITGA7-206ENST00000553804 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
ITGA7-206ENST00000553804 SLFN5Q08AF3 891 aa13.01□□□□□ -0.33
ITGA7-206ENST00000553804 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
ITGA7-206ENST00000553804 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
ITGA7-206ENST00000553804 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
ITGA7-206ENST00000553804 KIF3BO15066 747 aa13□□□□□ -0.33
ITGA7-206ENST00000553804 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
ITGA7-206ENST00000553804 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
ITGA7-206ENST00000553804 MLECQ14165 292 aa13□□□□□ -0.33
ITGA7-206ENST00000553804 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
ITGA7-206ENST00000553804 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
ITGA7-206ENST00000553804 MORC1Q86VD1 984 aa13□□□□□ -0.33
ITGA7-206ENST00000553804 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
ITGA7-206ENST00000553804 ANKRD45Q5TZF3 282 aa12.99□□□□□ -0.33
ITGA7-206ENST00000553804 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
ITGA7-206ENST00000553804 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
ITGA7-206ENST00000553804 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
ITGA7-206ENST00000553804 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
ITGA7-206ENST00000553804 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
ITGA7-206ENST00000553804 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
ITGA7-206ENST00000553804 CBX1P83916 185 aa12.98□□□□□ -0.33
ITGA7-206ENST00000553804 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
ITGA7-206ENST00000553804 DENND4BO75064 1496 aaPredicted RBP12.97□□□□□ -0.33
ITGA7-206ENST00000553804 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
ITGA7-206ENST00000553804 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
ITGA7-206ENST00000553804 IGSF3O75054 1194 aa12.96□□□□□ -0.33
ITGA7-206ENST00000553804 SSFA2P28290 1259 aa12.96□□□□□ -0.33
ITGA7-206ENST00000553804 GGT6Q6P531 493 aa12.96□□□□□ -0.33
ITGA7-206ENST00000553804 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
ITGA7-206ENST00000553804 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
ITGA7-206ENST00000553804 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms