RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ABCA6Q8N139 1617 aa9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 ATP7AQ04656 1500 aa9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 NBR1Q14596 966 aa9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 MROH2AA6NES4 1674 aa9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 SCAF11Q99590 1463 aaKnown RBP9.21□□□□□ -0.93
LINC-ROR-201ENST00000553704 KDM5AP29375 1690 aaKnown RBP9.21□□□□□ -0.94
LINC-ROR-201ENST00000553704 IPO9Q96P70 1041 aaKnown RBP9.21□□□□□ -0.94
LINC-ROR-201ENST00000553704 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
LINC-ROR-201ENST00000553704 ANP32AP39687 249 aaKnown RBP9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 CRBNQ96SW2 442 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 ARAP3Q8WWN8 1544 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 PPP2R1AP30153 589 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 C20orf194Q5TEA3 1177 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 ASXL1Q8IXJ9 1541 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 IFT172Q9UG01 1749 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 KIAA1210Q9ULL0 1709 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 SCAPERQ9BY12 1400 aa9.2□□□□□ -0.94
LINC-ROR-201ENST00000553704 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
LINC-ROR-201ENST00000553704 MAP3K4Q9Y6R4 1608 aa9.19□□□□□ -0.94
LINC-ROR-201ENST00000553704 PPRC1Q5VV67 1664 aaKnown RBP9.18□□□□□ -0.94
LINC-ROR-201ENST00000553704 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
LINC-ROR-201ENST00000553704 FANCAO15360 1455 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 TCERG1O14776 1098 aaKnown RBP9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 PDE4AP27815 886 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 KNSTRNQ9Y448 316 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 ERVK-7P63135 1459 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 KIF1BO60333 1816 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 ZNF521Q96K83 1311 aa9.17□□□□□ -0.94
LINC-ROR-201ENST00000553704 EFCAB6Q5THR3 1501 aa9.16□□□□□ -0.94
LINC-ROR-201ENST00000553704 DUSP27Q5VZP5 1158 aa9.16□□□□□ -0.94
LINC-ROR-201ENST00000553704 BACH2Q9BYV9 841 aa9.16□□□□□ -0.94
LINC-ROR-201ENST00000553704 KIDINS220Q9ULH0 1771 aa9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 ADGRL1O94910 1474 aa9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 NEURL4Q96JN8 1562 aa9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 MYOM2P54296 1465 aa9.15□□□□□ -0.94
LINC-ROR-201ENST00000553704 MYO3AQ8NEV4 1616 aa9.15□□□□□ -0.95
LINC-ROR-201ENST00000553704 WDR43Q15061 677 aaKnown RBP eCLIP9.15□□□□□ -0.95
LINC-ROR-201ENST00000553704 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.95
LINC-ROR-201ENST00000553704 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 KIF3BO15066 747 aa9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 CFAP70Q5T0N1 1121 aa9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 ZC3H13Q5T200 1668 aaKnown RBP9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 KDM2BQ8NHM5 1336 aa9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 AEBP2Q6ZN18 517 aaPredicted RBP9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
LINC-ROR-201ENST00000553704 EIF3AQ14152 1382 aaKnown RBP9.13□□□□□ -0.95
LINC-ROR-201ENST00000553704 KANK1Q14678 1352 aa9.13□□□□□ -0.95
LINC-ROR-201ENST00000553704 MS4A1P11836 297 aa9.13□□□□□ -0.95
LINC-ROR-201ENST00000553704 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 ADGRB3O60242 1522 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 NCBP3Q53F19 620 aaKnown RBP9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 CARD14Q9BXL6 1004 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 DMRT2Q9Y5R5 561 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 NRXN1Q9ULB1 1477 aa9.12□□□□□ -0.95
LINC-ROR-201ENST00000553704 CFAP65Q6ZU64 1925 aaKnown RBP9.11□□□□□ -0.95
LINC-ROR-201ENST00000553704 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
LINC-ROR-201ENST00000553704 CDCA8Q53HL2 280 aa9.11□□□□□ -0.95
LINC-ROR-201ENST00000553704 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
LINC-ROR-201ENST00000553704 PPLO60437 1756 aa9.11□□□□□ -0.95
LINC-ROR-201ENST00000553704 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
LINC-ROR-201ENST00000553704 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
LINC-ROR-201ENST00000553704 NOS1P29475 1434 aa9.1□□□□□ -0.95
LINC-ROR-201ENST00000553704 FRMPD1Q5SYB0 1578 aa9.1□□□□□ -0.95
LINC-ROR-201ENST00000553704 APAF1O14727 1248 aa9.1□□□□□ -0.95
LINC-ROR-201ENST00000553704 ASXL2Q76L83 1435 aa9.09□□□□□ -0.95
LINC-ROR-201ENST00000553704 NKTRP30414 1462 aaKnown RBP9.09□□□□□ -0.95
LINC-ROR-201ENST00000553704 LMTK2Q8IWU2 1503 aa9.09□□□□□ -0.95
LINC-ROR-201ENST00000553704 TRMT2AQ8IZ69 625 aaKnown RBP9.09□□□□□ -0.95
LINC-ROR-201ENST00000553704 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
LINC-ROR-201ENST00000553704 SETBP1Q9Y6X0 1596 aa9.08□□□□□ -0.96
LINC-ROR-201ENST00000553704 ADGRB1O14514 1584 aa9.08□□□□□ -0.96
LINC-ROR-201ENST00000553704 SIGLEC1Q9BZZ2 1709 aa9.08□□□□□ -0.96
LINC-ROR-201ENST00000553704 VIRMAQ69YN4 1812 aaKnown RBP9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 BCAR3O75815 825 aa9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 NSD3Q9BZ95 1437 aa9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 CENPQQ7L2Z9 268 aaPredicted RBP9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 NPATQ14207 1427 aa9.07□□□□□ -0.96
LINC-ROR-201ENST00000553704 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
LINC-ROR-201ENST00000553704 SBNO2Q9Y2G9 1366 aa9.06□□□□□ -0.96
LINC-ROR-201ENST00000553704 ZNF518AQ6AHZ1 1483 aa9.06□□□□□ -0.96
LINC-ROR-201ENST00000553704 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
LINC-ROR-201ENST00000553704 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
LINC-ROR-201ENST00000553704 ARHGEF28Q8N1W1 1705 aaKnown RBP9.05□□□□□ -0.96
LINC-ROR-201ENST00000553704 CENPJQ9HC77 1338 aaPredicted RBP9.05□□□□□ -0.96
LINC-ROR-201ENST00000553704 GLI2P10070 1586 aa9.05□□□□□ -0.96
LINC-ROR-201ENST00000553704 CHGAP10645 457 aaKnown RBP9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 KCNA4P22459 653 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 TRAK1Q9UPV9 953 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 POLR3AO14802 1390 aaPredicted RBP9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 USP32Q8NFA0 1604 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 CAMSAP1Q5T5Y3 1602 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms