RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 MROH2AA6NES4 1674 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 NWD1Q149M9 1564 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 CARMIL1Q5VZK9 1371 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 C19orf67A6NJJ6 358 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 ARID3CA6NKF2 412 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
PFDN5-219ENST00000553171 GLIPR1L2Q4G1C9 344 aa7□□□□□ -1.29
PFDN5-219ENST00000553171 AAMPQ13685 434 aa6.99□□□□□ -1.29
PFDN5-219ENST00000553171 DEFB132Q7Z7B7 95 aa6.99□□□□□ -1.29
PFDN5-219ENST00000553171 POLR3GLQ9BT43 218 aa6.98□□□□□ -1.29
PFDN5-219ENST00000553171 BLMP54132 1417 aaPredicted RBP6.98□□□□□ -1.29
PFDN5-219ENST00000553171 PHLPP1O60346 1717 aa6.98□□□□□ -1.29
PFDN5-219ENST00000553171 KDM5DQ9BY66 1539 aa6.97□□□□□ -1.29
PFDN5-219ENST00000553171 NAP1L5Q96NT1 182 aaPredicted RBP6.97□□□□□ -1.29
PFDN5-219ENST00000553171 XIRP1Q702N8 1843 aaKnown RBP6.97□□□□□ -1.29
PFDN5-219ENST00000553171 IGSF3O75054 1194 aa6.96□□□□□ -1.3
PFDN5-219ENST00000553171 ARID3AQ99856 593 aa6.96□□□□□ -1.3
PFDN5-219ENST00000553171 KDM2AQ9Y2K7 1162 aa6.96□□□□□ -1.3
PFDN5-219ENST00000553171 DEPDC5O75140 1603 aa6.96□□□□□ -1.3
PFDN5-219ENST00000553171 COL16A1Q07092 1604 aaPredicted RBP6.96□□□□□ -1.3
PFDN5-219ENST00000553171 LRRC9Q6ZRR7 1453 aa6.96□□□□□ -1.3
PFDN5-219ENST00000553171 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
PFDN5-219ENST00000553171 POTEIP0CG38 1075 aa6.95□□□□□ -1.3
PFDN5-219ENST00000553171 THEMISQ8N1K5 641 aaPredicted RBP6.95□□□□□ -1.3
PFDN5-219ENST00000553171 SCAF11Q99590 1463 aaKnown RBP6.94□□□□□ -1.3
PFDN5-219ENST00000553171 GIGYF1O75420 1035 aaPredicted RBP6.94□□□□□ -1.3
PFDN5-219ENST00000553171 COL13A1Q5TAT6 717 aaPredicted RBP6.94□□□□□ -1.3
PFDN5-219ENST00000553171 AFAP1Q8N556 730 aa6.94□□□□□ -1.3
PFDN5-219ENST00000553171 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
PFDN5-219ENST00000553171 KDM5CP41229 1560 aa6.94□□□□□ -1.3
PFDN5-219ENST00000553171 PRKAR2AP13861 404 aaKnown RBP6.93□□□□□ -1.3
PFDN5-219ENST00000553171 ZBTB12Q9Y330 459 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-219ENST00000553171 SHPRHQ149N8 1683 aa6.93□□□□□ -1.3
PFDN5-219ENST00000553171 RTEL1-TNFRSF6BF6WH68 1400 aa6.93□□□□□ -1.3
PFDN5-219ENST00000553171 ZNF518AQ6AHZ1 1483 aa6.92□□□□□ -1.3
PFDN5-219ENST00000553171 IQGAP1P46940 1657 aa6.92□□□□□ -1.3
PFDN5-219ENST00000553171 GOLGA3Q08378 1498 aa6.92□□□□□ -1.3
PFDN5-219ENST00000553171 ABCC1P33527 1531 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 TICAM2Q86XR7 235 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 TNS4Q8IZW8 715 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
PFDN5-219ENST00000553171 TMEM94Q12767 1356 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 PLCH2O75038 1416 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 KIF27Q86VH2 1401 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 MLH3Q9UHC1 1453 aa6.91□□□□□ -1.3
PFDN5-219ENST00000553171 PLEKHD1A6NEE1 506 aa6.9□□□□□ -1.3
PFDN5-219ENST00000553171 SF3B2Q13435 895 aaKnown RBP6.9□□□□□ -1.3
PFDN5-219ENST00000553171 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
PFDN5-219ENST00000553171 CCDC136Q96JN2 1154 aa6.9□□□□□ -1.3
PFDN5-219ENST00000553171 C8orf37Q96NL8 207 aa6.9□□□□□ -1.3
PFDN5-219ENST00000553171 NINLQ9Y2I6 1382 aa6.9□□□□□ -1.31
PFDN5-219ENST00000553171 CLSTN1O94985 981 aa6.89□□□□□ -1.31
PFDN5-219ENST00000553171 MYCNP04198 464 aaPredicted RBP6.89□□□□□ -1.31
PFDN5-219ENST00000553171 EFCAB2Q5VUJ9 269 aa6.89□□□□□ -1.31
PFDN5-219ENST00000553171 TRPC5Q9UL62 973 aaPredicted RBP6.89□□□□□ -1.31
PFDN5-219ENST00000553171 ABCA6Q8N139 1617 aa6.88□□□□□ -1.31
PFDN5-219ENST00000553171 HSPA6P17066 643 aa6.88□□□□□ -1.31
PFDN5-219ENST00000553171 PAXIP1Q6ZW49 1069 aaPredicted RBP6.88□□□□□ -1.31
PFDN5-219ENST00000553171 ATF5Q9Y2D1 282 aaPredicted RBP6.88□□□□□ -1.31
PFDN5-219ENST00000553171 ZBTB7CA1YPR0 619 aa6.87□□□□□ -1.31
PFDN5-219ENST00000553171 RBM10P98175 930 aaKnown RBP6.87□□□□□ -1.31
PFDN5-219ENST00000553171 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.87□□□□□ -1.31
PFDN5-219ENST00000553171 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
PFDN5-219ENST00000553171 TNRQ92752 1358 aa6.86□□□□□ -1.31
PFDN5-219ENST00000553171 MAP3K1Q13233 1512 aa6.86□□□□□ -1.31
PFDN5-219ENST00000553171 CLTCQ00610 1675 aaKnown RBP6.85□□□□□ -1.31
PFDN5-219ENST00000553171 A0A0U1RQG5 324 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-219ENST00000553171 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-219ENST00000553171 SALL2Q9Y467 1007 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-219ENST00000553171 AHDC1Q5TGY3 1603 aaPredicted RBP6.85□□□□□ -1.31
PFDN5-219ENST00000553171 FAM135AQ9P2D6 1515 aa6.85□□□□□ -1.31
PFDN5-219ENST00000553171 ATRNO75882 1429 aa6.84□□□□□ -1.31
PFDN5-219ENST00000553171 ZC3H13Q5T200 1668 aaKnown RBP6.84□□□□□ -1.31
PFDN5-219ENST00000553171 CHD4Q14839 1912 aa6.84□□□□□ -1.31
PFDN5-219ENST00000553171 DIP2AQ14689 1571 aa6.84□□□□□ -1.31
PFDN5-219ENST00000553171 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
PFDN5-219ENST00000553171 BAG6P46379 1132 aa6.84□□□□□ -1.31
PFDN5-219ENST00000553171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
PFDN5-219ENST00000553171 USP21Q9UK80 565 aa6.84□□□□□ -1.31
PFDN5-219ENST00000553171 UTRNP46939 3433 aa6.83□□□□□ -1.32
PFDN5-219ENST00000553171 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
PFDN5-219ENST00000553171 POTEMA6NI47 508 aa6.83□□□□□ -1.32
PFDN5-219ENST00000553171 KCNA6P17658 529 aa6.83□□□□□ -1.32
PFDN5-219ENST00000553171 FBXO31Q5XUX0 539 aaPredicted RBP6.83□□□□□ -1.32
PFDN5-219ENST00000553171 FNBP4Q8N3X1 1017 aaPredicted RBP6.83□□□□□ -1.32
PFDN5-219ENST00000553171 PPP1R1BQ9UD71 204 aaPredicted RBP6.83□□□□□ -1.32
PFDN5-219ENST00000553171 CAMTA1Q9Y6Y1 1673 aa6.83□□□□□ -1.32
PFDN5-219ENST00000553171 MSH6P52701 1360 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 ABCC3O15438 1527 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 ITSN2Q9NZM3 1697 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 RALGAPBQ86X10 1494 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 ARHGAP23Q9P227 1491 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 DNAJC5GQ8N7S2 189 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 KIF14Q15058 1648 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 UNC13BO14795 1591 aa6.82□□□□□ -1.32
PFDN5-219ENST00000553171 NLRP1Q9C000 1473 aa6.81□□□□□ -1.32
PFDN5-219ENST00000553171 PSMD1Q99460 953 aa6.81□□□□□ -1.32
PFDN5-219ENST00000553171 MIA2Q96PC5 1412 aa6.81□□□□□ -1.32
PFDN5-219ENST00000553171 FKBP8Q14318 412 aa6.8□□□□□ -1.32
PFDN5-219ENST00000553171 NBR1Q14596 966 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms